RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 Q6ZQT7 251 aa7.63□□□□□ -1.19
SMC1A-206ENST00000470241 FMC1Q96HJ9 113 aa7.63□□□□□ -1.19
SMC1A-206ENST00000470241 FAM210AQ96ND0 272 aa7.63□□□□□ -1.19
SMC1A-206ENST00000470241 C8orf49Q96NF6 230 aa7.63□□□□□ -1.19
SMC1A-206ENST00000470241 NEU1Q99519 415 aa7.63□□□□□ -1.19
SMC1A-206ENST00000470241 C20orf144Q9BQM9 153 aa7.63□□□□□ -1.19
SMC1A-206ENST00000470241 H7BYZ3 331 aa7.62□□□□□ -1.19
SMC1A-206ENST00000470241 PRM2P04554 102 aa7.62□□□□□ -1.19
SMC1A-206ENST00000470241 S100A9P06702 114 aaKnown RBP7.62□□□□□ -1.19
SMC1A-206ENST00000470241 UBE2G1P62253 170 aa7.62□□□□□ -1.19
SMC1A-206ENST00000470241 TOR2AQ5JU69 321 aa7.62□□□□□ -1.19
SMC1A-206ENST00000470241 SAPCD1Q5SSQ6 148 aa7.62□□□□□ -1.19
SMC1A-206ENST00000470241 TMEM256Q8N2U0 113 aa7.62□□□□□ -1.19
SMC1A-206ENST00000470241 Q8NAQ8 132 aa7.62□□□□□ -1.19
SMC1A-206ENST00000470241 LINC01587Q99440 93 aa7.62□□□□□ -1.19
SMC1A-206ENST00000470241 NDFIP1Q9BT67 221 aa7.62□□□□□ -1.19
SMC1A-206ENST00000470241 TMEM208Q9BTX3 173 aa7.62□□□□□ -1.19
SMC1A-206ENST00000470241 DERL1Q9BUN8 251 aa7.62□□□□□ -1.19
SMC1A-206ENST00000470241 IGHV4-28A0A0C4DH34 117 aa7.61□□□□□ -1.19
SMC1A-206ENST00000470241 SMIM9A6NGZ8 99 aa7.61□□□□□ -1.19
SMC1A-206ENST00000470241 ZNF705GA8MUZ8 300 aaPredicted RBP7.61□□□□□ -1.19
SMC1A-206ENST00000470241 LTAP01374 205 aa7.61□□□□□ -1.19
SMC1A-206ENST00000470241 MIFP14174 115 aa7.61□□□□□ -1.19
SMC1A-206ENST00000470241 RPL35P42766 123 aaKnown RBP7.61□□□□□ -1.19
SMC1A-206ENST00000470241 ZNF80P51504 273 aaPredicted RBP7.61□□□□□ -1.19
SMC1A-206ENST00000470241 TAS2R60P59551 318 aa7.61□□□□□ -1.19
SMC1A-206ENST00000470241 RAB14P61106 215 aa7.61□□□□□ -1.19
SMC1A-206ENST00000470241 CLLU1Q5K131 121 aa7.61□□□□□ -1.19
SMC1A-206ENST00000470241 Q6AWC8 147 aa7.61□□□□□ -1.19
SMC1A-206ENST00000470241 COX8CQ7Z4L0 72 aa7.61□□□□□ -1.19
SMC1A-206ENST00000470241 NIPSNAP3BQ9BS92 247 aa7.61□□□□□ -1.19
SMC1A-206ENST00000470241 EIF5A2Q9GZV4 153 aaKnown RBP7.61□□□□□ -1.19
SMC1A-206ENST00000470241 EDA2RQ9HAV5 297 aa7.61□□□□□ -1.19
SMC1A-206ENST00000470241 MED9Q9NWA0 146 aa7.61□□□□□ -1.19
SMC1A-206ENST00000470241 ZFP30Q9Y2G7 519 aa7.61□□□□□ -1.19
SMC1A-206ENST00000470241 TENM3Q9P273 2699 aa7.61□□□□□ -1.19
SMC1A-206ENST00000470241 DEFB4AO15263 64 aa7.6□□□□□ -1.19
SMC1A-206ENST00000470241 NDUFS6O75380 124 aaKnown RBP7.6□□□□□ -1.19
SMC1A-206ENST00000470241 GCGP01275 180 aa7.6□□□□□ -1.19
SMC1A-206ENST00000470241 AZU1P20160 251 aa7.6□□□□□ -1.19
SMC1A-206ENST00000470241 RRN3P1Q2M238 152 aa7.6□□□□□ -1.19
SMC1A-206ENST00000470241 SMUG1Q53HV7 270 aa7.6□□□□□ -1.19
SMC1A-206ENST00000470241 TMEM183AQ8IXX5 376 aa7.6□□□□□ -1.19
SMC1A-206ENST00000470241 ZC2HC1AQ96GY0 325 aa7.6□□□□□ -1.19
SMC1A-206ENST00000470241 PYGO2Q9BRQ0 406 aa7.6□□□□□ -1.19
SMC1A-206ENST00000470241 LINC00467Q9BRT7 94 aa7.6□□□□□ -1.19
SMC1A-206ENST00000470241 NBEAL2Q6ZNJ1 2754 aa7.59□□□□□ -1.19
SMC1A-206ENST00000470241 TRAV21A0A0B4J279 112 aa7.59□□□□□ -1.19
SMC1A-206ENST00000470241 A0A0J9YWU9 116 aa7.59□□□□□ -1.19
SMC1A-206ENST00000470241 RAB19A4D1S5 217 aa7.59□□□□□ -1.19
SMC1A-206ENST00000470241 C9JQL5 133 aa7.59□□□□□ -1.19
SMC1A-206ENST00000470241 TMEM250H0YL14 139 aa7.59□□□□□ -1.19
SMC1A-206ENST00000470241 RGS13O14921 159 aa7.59□□□□□ -1.19
SMC1A-206ENST00000470241 SRP19P09132 144 aaKnown RBP7.59□□□□□ -1.19
SMC1A-206ENST00000470241 HTN1P15515 57 aa7.59□□□□□ -1.19
SMC1A-206ENST00000470241 CRIP1P50238 77 aa7.59□□□□□ -1.19
SMC1A-206ENST00000470241 SRSF3P84103 164 aaKnown RBP7.59□□□□□ -1.19
SMC1A-206ENST00000470241 CENPWQ5EE01 88 aa7.59□□□□□ -1.19
SMC1A-206ENST00000470241 BAGE2Q86Y30 109 aa7.59□□□□□ -1.19
SMC1A-206ENST00000470241 NHLRC2Q8NBF2 726 aa7.59□□□□□ -1.19
SMC1A-206ENST00000470241 MLST8Q9BVC4 326 aa7.59□□□□□ -1.19
SMC1A-206ENST00000470241 C11orf68Q9H3H3 251 aaKnown RBP7.59□□□□□ -1.19
SMC1A-206ENST00000470241 TRBV20OR9-2A0A075B6H5 130 aa7.58□□□□□ -1.2
SMC1A-206ENST00000470241 IGHV1OR15-1A0A075B7D0 117 aa7.58□□□□□ -1.2
SMC1A-206ENST00000470241 PLAC8L1A1L4L8 177 aa7.58□□□□□ -1.2
SMC1A-206ENST00000470241 IGLV2-8P01709 118 aa7.58□□□□□ -1.2
SMC1A-206ENST00000470241 PFN1P07737 140 aaKnown RBP7.58□□□□□ -1.2
SMC1A-206ENST00000470241 MUC21Q5SSG8 566 aa7.58□□□□□ -1.2
SMC1A-206ENST00000470241 EIF4E3Q8N5X7 224 aaKnown RBP7.58□□□□□ -1.2
SMC1A-206ENST00000470241 RNASE8Q8TDE3 154 aaKnown RBP7.58□□□□□ -1.2
SMC1A-206ENST00000470241 C11orf21Q9P2W6 132 aa7.58□□□□□ -1.2
SMC1A-206ENST00000470241 EMP1P54849 157 aa7.57□□□□□ -1.2
SMC1A-206ENST00000470241 PEA15Q15121 130 aa7.57□□□□□ -1.2
SMC1A-206ENST00000470241 ZNF674Q2M3X9 581 aa7.57□□□□□ -1.2
SMC1A-206ENST00000470241 TDRG1Q3Y452 100 aa7.57□□□□□ -1.2
SMC1A-206ENST00000470241 ANXA2RQ3ZCQ2 193 aa7.57□□□□□ -1.2
SMC1A-206ENST00000470241 TMEM263Q8WUH6 116 aaKnown RBP7.57□□□□□ -1.2
SMC1A-206ENST00000470241 PARLQ9H300 379 aa7.57□□□□□ -1.2
SMC1A-206ENST00000470241 NAGKQ9UJ70 344 aa7.57□□□□□ -1.2
SMC1A-206ENST00000470241 TP53TG3Q9ULZ0 132 aa7.57□□□□□ -1.2
SMC1A-206ENST00000470241 TMEM189A5PLL7 270 aa7.56□□□□□ -1.2
SMC1A-206ENST00000470241 PGPEP1LA6NFU8 196 aa7.56□□□□□ -1.2
SMC1A-206ENST00000470241 CBY3A6NI87 242 aa7.56□□□□□ -1.2
SMC1A-206ENST00000470241 FABP5P3A8MUU1 101 aa7.56□□□□□ -1.2
SMC1A-206ENST00000470241 C9JCJ5 164 aa7.56□□□□□ -1.2
SMC1A-206ENST00000470241 SH2D1AO60880 128 aa7.56□□□□□ -1.2
SMC1A-206ENST00000470241 GNG4P50150 75 aa7.56□□□□□ -1.2
SMC1A-206ENST00000470241 CEBPGP53567 150 aa7.56□□□□□ -1.2
SMC1A-206ENST00000470241 FAM159AQ6UWV7 190 aa7.56□□□□□ -1.2
SMC1A-206ENST00000470241 ZNF493Q6ZR52 646 aa7.56□□□□□ -1.2
SMC1A-206ENST00000470241 C11orf72Q8NBR9 251 aa7.56□□□□□ -1.2
SMC1A-206ENST00000470241 C16orf74Q96GX8 76 aa7.56□□□□□ -1.2
SMC1A-206ENST00000470241 SMDT1Q9H4I9 107 aa7.56□□□□□ -1.2
SMC1A-206ENST00000470241 CELA1Q9UNI1 258 aa7.56□□□□□ -1.2
SMC1A-206ENST00000470241 STAB2Q8WWQ8 2551 aa7.55□□□□□ -1.2
SMC1A-206ENST00000470241 IGKV3D-20A0A0C4DH25 116 aa7.55□□□□□ -1.2
SMC1A-206ENST00000470241 GNRH2O43555 120 aa7.55□□□□□ -1.2
SMC1A-206ENST00000470241 TYMSP04818 313 aa7.55□□□□□ -1.2
SMC1A-206ENST00000470241 FAM162BQ5T6X4 162 aa7.55□□□□□ -1.2
SMC1A-206ENST00000470241 SMIM12Q96EX1 92 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms