RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 HYLS1Q96M11 299 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 VPS25Q9BRG1 176 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 SPANXDQ9BXN6 97 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 SNHG12Q9BXW3 62 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 CYSTM1Q9H1C7 97 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 GNG8Q9UK08 70 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 IER3IP1Q9Y5U9 82 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 CHCHD2Q9Y6H1 151 aaPredicted RBP1.29□□□□□ -2.2
BRCA2-202ENST00000470094 U3KQ87 197 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 DSPPQ9NZW4 1301 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 KTN1Q86UP2 1357 aaKnown RBP1.29□□□□□ -2.2
BRCA2-202ENST00000470094 CCDC88BA6NC98 1476 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 FCGBPQ9Y6R7 5405 aaPredicted RBP1.29□□□□□ -2.2
BRCA2-202ENST00000470094 PRDM15P57071 1507 aaPredicted RBP1.29□□□□□ -2.2
BRCA2-202ENST00000470094 KDM5DQ9BY66 1539 aa1.29□□□□□ -2.2
BRCA2-202ENST00000470094 EIF4G3O43432 1585 aaKnown RBP1.29□□□□□ -2.2
BRCA2-202ENST00000470094 KDM5AP29375 1690 aaKnown RBP1.29□□□□□ -2.2
BRCA2-202ENST00000470094 TRAV27A0A087WT01 109 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 hDV103S1A0JD37 113 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 TMEM218A2RU14 115 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 CDC42EP2O14613 210 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 PRB1P04280 392 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 RNASE3P12724 160 aaKnown RBP1.28□□□□□ -2.2
BRCA2-202ENST00000470094 CCL4P13236 92 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 FABP4P15090 132 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 FGF7P21781 194 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 CRYGSP22914 178 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 BRS3P32247 399 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 AKR1D1P51857 326 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 MAXP61244 160 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 CDK6Q00534 326 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 CDK5R1Q15078 307 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 PYY3Q5JQD4 70 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 C10orf55Q5SWW7 151 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 C1orf134Q5TEV5 83 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 SCIMPQ6UWF3 145 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 C15orf53Q8NAA6 179 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 TMEM254Q8TBM7 123 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 S100ZQ8WXG8 99 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 PSMF1Q92530 271 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 MAGOHBQ96A72 148 aaKnown RBP1.28□□□□□ -2.2
BRCA2-202ENST00000470094 MUCL1Q96DR8 90 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 V9GYS6 101 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 PRG4Q92954 1404 aaPredicted RBP1.28□□□□□ -2.2
BRCA2-202ENST00000470094 FOCADQ5VW36 1801 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 PHIPQ8WWQ0 1821 aa1.28□□□□□ -2.2
BRCA2-202ENST00000470094 RTTNQ86VV8 2226 aa1.27□□□□□ -2.21
BRCA2-202ENST00000470094 MYH9P35579 1960 aaKnown RBP1.27□□□□□ -2.21
BRCA2-202ENST00000470094 CDK5RAP2Q96SN8 1893 aa1.27□□□□□ -2.21
BRCA2-202ENST00000470094 KDM5CP41229 1560 aa1.27□□□□□ -2.21
BRCA2-202ENST00000470094 BAZ1AQ9NRL2 1556 aaPredicted RBP1.27□□□□□ -2.21
BRCA2-202ENST00000470094 COL1A1P02452 1464 aaPredicted RBP1.27□□□□□ -2.21
BRCA2-202ENST00000470094 CCDC18Q5T9S5 1454 aa1.27□□□□□ -2.21
BRCA2-202ENST00000470094 NSD3Q9BZ95 1437 aa1.27□□□□□ -2.21
BRCA2-202ENST00000470094 UACAQ9BZF9 1416 aa1.27□□□□□ -2.21
BRCA2-202ENST00000470094 M0R233 179 aa1.27□□□□□ -2.21
BRCA2-202ENST00000470094 UQCRQO14949 82 aa1.27□□□□□ -2.21
BRCA2-202ENST00000470094 MT-ND6P03923 174 aa1.27□□□□□ -2.21
BRCA2-202ENST00000470094 SAA1P0DJI8 122 aaPredicted RBP1.27□□□□□ -2.21
BRCA2-202ENST00000470094 HIST1H1DP16402 221 aaKnown RBP1.27□□□□□ -2.21
BRCA2-202ENST00000470094 FOXA3P55318 350 aaPredicted RBP1.27□□□□□ -2.21
BRCA2-202ENST00000470094 ASB16-AS1Q495Z4 193 aa1.27□□□□□ -2.21
BRCA2-202ENST00000470094 C1orf137Q5JT78 98 aa1.27□□□□□ -2.21
BRCA2-202ENST00000470094 COL5A1-AS1Q5SY13 56 aa1.27□□□□□ -2.21
BRCA2-202ENST00000470094 FOXI2Q6ZQN5 318 aa1.27□□□□□ -2.21
BRCA2-202ENST00000470094 ZNF833PQ6ZTB9 187 aa1.27□□□□□ -2.21
BRCA2-202ENST00000470094 ARPINQ7Z6K5 226 aa1.27□□□□□ -2.21
BRCA2-202ENST00000470094 TEX29Q8N6K0 151 aa1.27□□□□□ -2.21
BRCA2-202ENST00000470094 TCTEX1D1Q8N7M0 179 aa1.27□□□□□ -2.21
BRCA2-202ENST00000470094 TSTD1Q8NFU3 115 aa1.27□□□□□ -2.21
BRCA2-202ENST00000470094 OR5D14Q8NGL3 314 aa1.27□□□□□ -2.21
BRCA2-202ENST00000470094 OR2T35Q8NGX2 323 aa1.27□□□□□ -2.21
BRCA2-202ENST00000470094 BRK1Q8WUW1 75 aa1.27□□□□□ -2.21
BRCA2-202ENST00000470094 ARL11Q969Q4 196 aa1.27□□□□□ -2.21
BRCA2-202ENST00000470094 PSMG3Q9BT73 122 aaPredicted RBP1.27□□□□□ -2.21
BRCA2-202ENST00000470094 KIF20BQ96Q89 1820 aa1.26□□□□□ -2.21
BRCA2-202ENST00000470094 ZFYVE16Q7Z3T8 1539 aa1.26□□□□□ -2.21
BRCA2-202ENST00000470094 TCRBV4S1A1TA0A5B7 111 aa1.26□□□□□ -2.21
BRCA2-202ENST00000470094 OR2T8A6NH00 312 aa1.26□□□□□ -2.21
BRCA2-202ENST00000470094 ZNF727A8MUV8 499 aa1.26□□□□□ -2.21
BRCA2-202ENST00000470094 NCR2O95944 276 aa1.26□□□□□ -2.21
BRCA2-202ENST00000470094 HBDP02042 147 aa1.26□□□□□ -2.21
BRCA2-202ENST00000470094 COPZ1P61923 177 aa1.26□□□□□ -2.21
BRCA2-202ENST00000470094 CNBPP62633 177 aaKnown RBP1.26□□□□□ -2.21
BRCA2-202ENST00000470094 HIST1H1AQ02539 215 aaPredicted RBP1.26□□□□□ -2.21
BRCA2-202ENST00000470094 CCSMST1Q4G0I0 132 aa1.26□□□□□ -2.21
BRCA2-202ENST00000470094 GLYATL3Q5SZD4 288 aa1.26□□□□□ -2.21
BRCA2-202ENST00000470094 NCMAPQ5T1S8 102 aa1.26□□□□□ -2.21
BRCA2-202ENST00000470094 UNQ6190/PRO20217Q6UXQ8 127 aa1.26□□□□□ -2.21
BRCA2-202ENST00000470094 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.26□□□□□ -2.21
BRCA2-202ENST00000470094 C4orf3Q8WVX3 66 aa1.26□□□□□ -2.21
BRCA2-202ENST00000470094 PP6455Q8WZ26 134 aa1.26□□□□□ -2.21
BRCA2-202ENST00000470094 TP53RKQ96S44 253 aa1.26□□□□□ -2.21
BRCA2-202ENST00000470094 MRPL57Q9BQC6 102 aaKnown RBP1.26□□□□□ -2.21
BRCA2-202ENST00000470094 RPRMQ9NS64 109 aa1.26□□□□□ -2.21
BRCA2-202ENST00000470094 TPRKBQ9Y3C4 175 aa1.26□□□□□ -2.21
BRCA2-202ENST00000470094 CHD3Q12873 2000 aaKnown RBP1.26□□□□□ -2.21
BRCA2-202ENST00000470094 MYH4Q9Y623 1939 aa1.26□□□□□ -2.21
BRCA2-202ENST00000470094 BAZ2BQ9UIF8 2168 aaKnown RBP1.25□□□□□ -2.21
BRCA2-202ENST00000470094 NLRP1Q9C000 1473 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms