RNA–Protein interactions for RNA: ENST00000469278.5

SOX2-OT-204, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-204ENST00000469278 C10orf111Q8N326 155 aa0.72□□□□□ -2.29
SOX2-OT-204ENST00000469278 OR8J3Q8NGG0 315 aa0.72□□□□□ -2.29
SOX2-OT-204ENST00000469278 LPAR5Q9H1C0 372 aa0.72□□□□□ -2.29
SOX2-OT-204ENST00000469278 CALML5Q9NZT1 146 aa0.72□□□□□ -2.29
SOX2-OT-204ENST00000469278 NDUFAF1Q9Y375 327 aa0.72□□□□□ -2.29
SOX2-OT-204ENST00000469278 TCOF1Q13428 1488 aaKnown RBP0.72□□□□□ -2.29
SOX2-OT-204ENST00000469278 FBN2P35556 2912 aa0.71□□□□□ -2.3
SOX2-OT-204ENST00000469278 IFITM5A6NNB3 132 aa0.71□□□□□ -2.3
SOX2-OT-204ENST00000469278 J3KT08 172 aa0.71□□□□□ -2.3
SOX2-OT-204ENST00000469278 HBDP02042 147 aa0.71□□□□□ -2.3
SOX2-OT-204ENST00000469278 GYPBP06028 91 aa0.71□□□□□ -2.3
SOX2-OT-204ENST00000469278 RPL22P35268 128 aaKnown RBP0.71□□□□□ -2.3
SOX2-OT-204ENST00000469278 SPINT3P49223 89 aa0.71□□□□□ -2.3
SOX2-OT-204ENST00000469278 CCSMST1Q4G0I0 132 aa0.71□□□□□ -2.3
SOX2-OT-204ENST00000469278 IZUMO2Q6UXV1 221 aa0.71□□□□□ -2.3
SOX2-OT-204ENST00000469278 Q6ZS92 163 aa0.71□□□□□ -2.3
SOX2-OT-204ENST00000469278 OR8I2Q8N0Y5 310 aa0.71□□□□□ -2.3
SOX2-OT-204ENST00000469278 OR5A2Q8NGI9 324 aa0.71□□□□□ -2.3
SOX2-OT-204ENST00000469278 GINS2Q9Y248 185 aa0.71□□□□□ -2.3
SOX2-OT-204ENST00000469278 ZDBF2Q9HCK1 2354 aa0.7□□□□□ -2.3
SOX2-OT-204ENST00000469278 FER1L6Q2WGJ9 1857 aa0.7□□□□□ -2.3
SOX2-OT-204ENST00000469278 TMEM189A5PLL7 270 aa0.7□□□□□ -2.3
SOX2-OT-204ENST00000469278 PRORSD1PA6NEY8 169 aa0.7□□□□□ -2.3
SOX2-OT-204ENST00000469278 DPM2O94777 84 aa0.7□□□□□ -2.3
SOX2-OT-204ENST00000469278 IGHV3-30P01768 117 aa0.7□□□□□ -2.3
SOX2-OT-204ENST00000469278 IGHV3-30-5P0DP03 117 aa0.7□□□□□ -2.3
SOX2-OT-204ENST00000469278 PRB4P10163 310 aaPredicted RBP0.7□□□□□ -2.3
SOX2-OT-204ENST00000469278 PCBD1P61457 104 aa0.7□□□□□ -2.3
SOX2-OT-204ENST00000469278 CCL19Q99731 98 aa0.7□□□□□ -2.3
SOX2-OT-204ENST00000469278 SPANXA1Q9NS26 97 aa0.7□□□□□ -2.3
SOX2-OT-204ENST00000469278 FGD6Q6ZV73 1430 aa0.7□□□□□ -2.3
SOX2-OT-204ENST00000469278 DSPPQ9NZW4 1301 aa0.69□□□□□ -2.3
SOX2-OT-204ENST00000469278 IGHV1-24A0A0C4DH33 117 aa0.69□□□□□ -2.3
SOX2-OT-204ENST00000469278 TMEM30CPA0ZSE6 113 aa0.69□□□□□ -2.3
SOX2-OT-204ENST00000469278 UQCRQO14949 82 aa0.69□□□□□ -2.3
SOX2-OT-204ENST00000469278 CMPK1P30085 196 aa0.69□□□□□ -2.3
SOX2-OT-204ENST00000469278 CAV3P56539 151 aa0.69□□□□□ -2.3
SOX2-OT-204ENST00000469278 B2MP61769 119 aa0.69□□□□□ -2.3
SOX2-OT-204ENST00000469278 QRFPP83859 136 aa0.69□□□□□ -2.3
SOX2-OT-204ENST00000469278 DR1Q01658 176 aa0.69□□□□□ -2.3
SOX2-OT-204ENST00000469278 IDO2Q6ZQW0 420 aa0.69□□□□□ -2.3
SOX2-OT-204ENST00000469278 NAT14Q8WUY8 206 aa0.69□□□□□ -2.3
SOX2-OT-204ENST00000469278 C19orf12Q9NSK7 152 aa0.69□□□□□ -2.3
SOX2-OT-204ENST00000469278 SPANXCQ9NY87 97 aa0.69□□□□□ -2.3
SOX2-OT-204ENST00000469278 FAM135BQ49AJ0 1406 aa0.69□□□□□ -2.3
SOX2-OT-204ENST00000469278 MACF1Q9UPN3 7388 aaKnown RBP0.69□□□□□ -2.3
SOX2-OT-204ENST00000469278 ANK1P16157 1881 aa0.69□□□□□ -2.3
SOX2-OT-204ENST00000469278 ZNF469Q96JG9 3925 aaPredicted RBP0.69□□□□□ -2.3
SOX2-OT-204ENST00000469278 PNMA8CA0A1B0GUJ8 204 aa0.68□□□□□ -2.3
SOX2-OT-204ENST00000469278 CDC42EP2O14613 210 aa0.68□□□□□ -2.3
SOX2-OT-204ENST00000469278 PAEPP09466 180 aa0.68□□□□□ -2.3
SOX2-OT-204ENST00000469278 IL7P13232 177 aa0.68□□□□□ -2.3
SOX2-OT-204ENST00000469278 HIST1H1BP16401 226 aaKnown RBP0.68□□□□□ -2.3
SOX2-OT-204ENST00000469278 ZNF137PP52743 207 aa0.68□□□□□ -2.3
SOX2-OT-204ENST00000469278 HSD17B12Q53GQ0 312 aa0.68□□□□□ -2.3
SOX2-OT-204ENST00000469278 C6orf52Q5T4I8 152 aa0.68□□□□□ -2.3
SOX2-OT-204ENST00000469278 CSAG1Q6PB30 78 aa0.68□□□□□ -2.3
SOX2-OT-204ENST00000469278 SPATA8Q6RVD6 105 aa0.68□□□□□ -2.3
SOX2-OT-204ENST00000469278 TAC4Q86UU9 113 aa0.68□□□□□ -2.3
SOX2-OT-204ENST00000469278 ATOH7Q8N100 152 aa0.68□□□□□ -2.3
SOX2-OT-204ENST00000469278 MRPL36Q9P0J6 103 aaKnown RBP0.68□□□□□ -2.3
SOX2-OT-204ENST00000469278 AHNAKQ09666 5890 aaKnown RBP0.68□□□□□ -2.3
SOX2-OT-204ENST00000469278 OVOS2A0A0G2JMS6 1433 aa0.67□□□□□ -2.3
SOX2-OT-204ENST00000469278 KIAA1549LQ6ZVL6 1849 aa0.67□□□□□ -2.3
SOX2-OT-204ENST00000469278 DEGS1O15121 323 aa0.67□□□□□ -2.3
SOX2-OT-204ENST00000469278 TPST1O60507 370 aa0.67□□□□□ -2.3
SOX2-OT-204ENST00000469278 SMIM24O75264 130 aa0.67□□□□□ -2.3
SOX2-OT-204ENST00000469278 TCRAP04437 139 aa0.67□□□□□ -2.3
SOX2-OT-204ENST00000469278 CCL4P13236 92 aa0.67□□□□□ -2.3
SOX2-OT-204ENST00000469278 RPS28P62857 69 aaKnown RBP0.67□□□□□ -2.3
SOX2-OT-204ENST00000469278 IQCJQ1A5X6 159 aa0.67□□□□□ -2.3
SOX2-OT-204ENST00000469278 XAF1Q6GPH4 301 aa0.67□□□□□ -2.3
SOX2-OT-204ENST00000469278 UNQ5815/PRO19632Q6UWF5 114 aa0.67□□□□□ -2.3
SOX2-OT-204ENST00000469278 OTOSQ8NHW6 89 aa0.67□□□□□ -2.3
SOX2-OT-204ENST00000469278 AIF1LQ9BQI0 150 aa0.67□□□□□ -2.3
SOX2-OT-204ENST00000469278 JPT1Q9UK76 154 aa0.67□□□□□ -2.3
SOX2-OT-204ENST00000469278 USP54Q70EL1 1684 aa0.67□□□□□ -2.3
SOX2-OT-204ENST00000469278 MYH1P12882 1939 aa0.67□□□□□ -2.3
SOX2-OT-204ENST00000469278 ATG2AQ2TAZ0 1938 aa0.66□□□□□ -2.3
SOX2-OT-204ENST00000469278 TRAV36DV7A0A075B6V5 113 aa0.66□□□□□ -2.3
SOX2-OT-204ENST00000469278 A6NN06 94 aa0.66□□□□□ -2.3
SOX2-OT-204ENST00000469278 K7EIL1 84 aa0.66□□□□□ -2.3
SOX2-OT-204ENST00000469278 SLC25A5P05141 298 aaKnown RBP0.66□□□□□ -2.3
SOX2-OT-204ENST00000469278 OR8B8Q15620 311 aa0.66□□□□□ -2.3
SOX2-OT-204ENST00000469278 RHOHQ15669 191 aa0.66□□□□□ -2.3
SOX2-OT-204ENST00000469278 MAGOHBQ96A72 148 aaKnown RBP0.66□□□□□ -2.3
SOX2-OT-204ENST00000469278 COMMD3Q9UBI1 195 aa0.66□□□□□ -2.3
SOX2-OT-204ENST00000469278 TRPM7Q96QT4 1865 aa0.66□□□□□ -2.3
SOX2-OT-204ENST00000469278 KNTC1P50748 2209 aa0.66□□□□□ -2.3
SOX2-OT-204ENST00000469278 MED23Q9ULK4 1368 aa0.66□□□□□ -2.3
SOX2-OT-204ENST00000469278 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.65□□□□□ -2.31
SOX2-OT-204ENST00000469278 A0A0G2JMM0 328 aa0.65□□□□□ -2.31
SOX2-OT-204ENST00000469278 HIGD1CA8MV81 97 aa0.65□□□□□ -2.31
SOX2-OT-204ENST00000469278 FXYD1O00168 92 aa0.65□□□□□ -2.31
SOX2-OT-204ENST00000469278 MT-ND4LP03901 98 aa0.65□□□□□ -2.31
SOX2-OT-204ENST00000469278 NBEAP1P0C6P0 100 aa0.65□□□□□ -2.31
SOX2-OT-204ENST00000469278 EVI2AP22794 236 aa0.65□□□□□ -2.31
SOX2-OT-204ENST00000469278 SDC4P31431 198 aa0.65□□□□□ -2.31
SOX2-OT-204ENST00000469278 POLR2JP52435 117 aaKnown RBP0.65□□□□□ -2.31
SOX2-OT-204ENST00000469278 CCDC153Q494R4 210 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms