RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 DUX5Q96PT3 197 aa9.78□□□□□ -0.84
USP11-206ENST00000469080 C9JCJ5 164 aa9.77□□□□□ -0.84
USP11-206ENST00000469080 C19orf84I3L1E1 186 aa9.77□□□□□ -0.84
USP11-206ENST00000469080 TMEM155Q4W5P6 130 aa9.77□□□□□ -0.84
USP11-206ENST00000469080 CHD6Q8TD26 2715 aa9.77□□□□□ -0.85
USP11-206ENST00000469080 IL4P05112 153 aa9.77□□□□□ -0.85
USP11-206ENST00000469080 C8orf88P0DMB2 117 aa9.77□□□□□ -0.85
USP11-206ENST00000469080 CGB3P0DN86 165 aa9.77□□□□□ -0.85
USP11-206ENST00000469080 CGB7P0DN87 165 aa9.77□□□□□ -0.85
USP11-206ENST00000469080 FGF6P10767 208 aa9.77□□□□□ -0.85
USP11-206ENST00000469080 PRNTQ86SH4 94 aa9.77□□□□□ -0.85
USP11-206ENST00000469080 PDPNQ86YL7 162 aa9.77□□□□□ -0.85
USP11-206ENST00000469080 EXOC3-AS1Q8N2X6 119 aa9.77□□□□□ -0.85
USP11-206ENST00000469080 NDUFV3P56181 108 aaKnown RBP9.77□□□□□ -0.85
USP11-206ENST00000469080 TEX36Q5VZQ5 186 aa9.77□□□□□ -0.85
USP11-206ENST00000469080 NUP35Q8NFH5 326 aa9.77□□□□□ -0.85
USP11-206ENST00000469080 SOX21Q9Y651 276 aaPredicted RBP9.77□□□□□ -0.85
USP11-206ENST00000469080 A0A1W2PPR1 153 aa9.76□□□□□ -0.85
USP11-206ENST00000469080 BUB1B-PAK6H3BSN5 160 aa9.76□□□□□ -0.85
USP11-206ENST00000469080 EIF4EBP1Q13541 118 aaPredicted RBP9.76□□□□□ -0.85
USP11-206ENST00000469080 DPM3Q9P2X0 92 aa9.76□□□□□ -0.85
USP11-206ENST00000469080 SMIM27A0A1W2PRY6 76 aa9.76□□□□□ -0.85
USP11-206ENST00000469080 P0C879 139 aa9.76□□□□□ -0.85
USP11-206ENST00000469080 FHL3Q13643 280 aa9.76□□□□□ -0.85
USP11-206ENST00000469080 ZNF502Q8TBZ5 544 aa9.76□□□□□ -0.85
USP11-206ENST00000469080 AMMECR1Q9Y4X0 333 aaPredicted RBP9.76□□□□□ -0.85
USP11-206ENST00000469080 FNDC10F2Z333 226 aa9.76□□□□□ -0.85
USP11-206ENST00000469080 EVI2AP22794 236 aa9.76□□□□□ -0.85
USP11-206ENST00000469080 LINC01545Q5VT33 79 aa9.76□□□□□ -0.85
USP11-206ENST00000469080 IGLL5B9A064 214 aa9.75□□□□□ -0.85
USP11-206ENST00000469080 MPDU1O75352 247 aa9.75□□□□□ -0.85
USP11-206ENST00000469080 VMO1Q7Z5L0 202 aa9.75□□□□□ -0.85
USP11-206ENST00000469080 CHCHD1Q96BP2 118 aaKnown RBP9.75□□□□□ -0.85
USP11-206ENST00000469080 TTTY13Q9BZ97 58 aa9.75□□□□□ -0.85
USP11-206ENST00000469080 HIGD1CA8MV81 97 aa9.75□□□□□ -0.85
USP11-206ENST00000469080 SNCGO76070 127 aa9.75□□□□□ -0.85
USP11-206ENST00000469080 GOLT1AQ6ZVE7 132 aa9.75□□□□□ -0.85
USP11-206ENST00000469080 MAP1LC3AQ9H492 121 aa9.75□□□□□ -0.85
USP11-206ENST00000469080 SIGLEC8Q9NYZ4 499 aa9.75□□□□□ -0.85
USP11-206ENST00000469080 SIGLEC9Q9Y336 463 aa9.75□□□□□ -0.85
USP11-206ENST00000469080 HELZ2Q9BYK8 2649 aaKnown RBP9.75□□□□□ -0.85
USP11-206ENST00000469080 M0R3E3 92 aa9.74□□□□□ -0.85
USP11-206ENST00000469080 IGHV3-11P01762 117 aa9.74□□□□□ -0.85
USP11-206ENST00000469080 IFITM1P13164 125 aa9.74□□□□□ -0.85
USP11-206ENST00000469080 MFAP4P55083 255 aa9.74□□□□□ -0.85
USP11-206ENST00000469080 CACNG7P62955 275 aa9.74□□□□□ -0.85
USP11-206ENST00000469080 PIMREGQ9BSJ6 248 aa9.74□□□□□ -0.85
USP11-206ENST00000469080 SMIM9A6NGZ8 99 aa9.73□□□□□ -0.85
USP11-206ENST00000469080 H3BVH4 76 aa9.73□□□□□ -0.85
USP11-206ENST00000469080 LY96Q9Y6Y9 160 aa9.73□□□□□ -0.85
USP11-206ENST00000469080 TEX15Q9BXT5 2789 aa9.73□□□□□ -0.85
USP11-206ENST00000469080 LOC107984640A0A0U1RRK4 108 aa9.73□□□□□ -0.85
USP11-206ENST00000469080 GGTLC3B5MD39 225 aa9.73□□□□□ -0.85
USP11-206ENST00000469080 ZFP36P26651 326 aaKnown RBP9.73□□□□□ -0.85
USP11-206ENST00000469080 ZNF833PQ6ZTB9 187 aa9.73□□□□□ -0.85
USP11-206ENST00000469080 C17orf77Q96MU5 243 aa9.73□□□□□ -0.85
USP11-206ENST00000469080 NDUFA4L2Q9NRX3 87 aa9.73□□□□□ -0.85
USP11-206ENST00000469080 TMEM167BQ9NRX6 74 aa9.73□□□□□ -0.85
USP11-206ENST00000469080 NF1P21359 2839 aa9.72□□□□□ -0.85
USP11-206ENST00000469080 G3V318 75 aa9.72□□□□□ -0.85
USP11-206ENST00000469080 NFE4Q86UQ8 179 aa9.72□□□□□ -0.85
USP11-206ENST00000469080 PRSS3P2Q8NHM4 247 aa9.72□□□□□ -0.85
USP11-206ENST00000469080 CITED2Q99967 270 aaPredicted RBP9.72□□□□□ -0.85
USP11-206ENST00000469080 TRAV40A0A0B4J280 105 aa9.72□□□□□ -0.85
USP11-206ENST00000469080 E9PLD3 99 aa9.72□□□□□ -0.85
USP11-206ENST00000469080 FXYD7P58549 80 aa9.72□□□□□ -0.85
USP11-206ENST00000469080 APOHP02749 345 aaPredicted RBP9.72□□□□□ -0.85
USP11-206ENST00000469080 HIST2H2BDQ6DRA6 164 aa9.72□□□□□ -0.85
USP11-206ENST00000469080 KHDC1LQ5JSQ8 128 aa9.71□□□□□ -0.85
USP11-206ENST00000469080 TMEM167AQ8TBQ9 72 aa9.71□□□□□ -0.85
USP11-206ENST00000469080 C1orf159Q96HA4 380 aa9.71□□□□□ -0.85
USP11-206ENST00000469080 PGLYRP4Q96LB8 373 aa9.71□□□□□ -0.85
USP11-206ENST00000469080 AP5S1Q9NUS5 200 aa9.71□□□□□ -0.85
USP11-206ENST00000469080 HIGD1AQ9Y241 93 aa9.71□□□□□ -0.85
USP11-206ENST00000469080 LOC107984156A0A0G2JMH3 177 aa9.71□□□□□ -0.86
USP11-206ENST00000469080 SRSF1Q07955 248 aaKnown RBP eCLIP9.71□□□□□ -0.86
USP11-206ENST00000469080 WFDC3Q8IUB2 231 aa9.71□□□□□ -0.86
USP11-206ENST00000469080 ARL17AQ8IVW1 177 aa9.71□□□□□ -0.86
USP11-206ENST00000469080 CHAC1Q9BUX1 264 aa9.71□□□□□ -0.86
USP11-206ENST00000469080 ZNF785A8K8V0 405 aa9.7□□□□□ -0.86
USP11-206ENST00000469080 DYNAPQ8N1N2 210 aa9.7□□□□□ -0.86
USP11-206ENST00000469080 DEFB104AQ8WTQ1 72 aa9.7□□□□□ -0.86
USP11-206ENST00000469080 LTAP01374 205 aa9.7□□□□□ -0.86
USP11-206ENST00000469080 PSMB2P49721 201 aa9.7□□□□□ -0.86
USP11-206ENST00000469080 HBBP68871 147 aa9.7□□□□□ -0.86
USP11-206ENST00000469080 ZNF747Q9BV97 191 aa9.7□□□□□ -0.86
USP11-206ENST00000469080 NBR2O15453 112 aa9.7□□□□□ -0.86
USP11-206ENST00000469080 SRD5A1P18405 259 aa9.7□□□□□ -0.86
USP11-206ENST00000469080 C2orf83Q53S99 150 aa9.7□□□□□ -0.86
USP11-206ENST00000469080 CIARTQ8N365 385 aaPredicted RBP9.7□□□□□ -0.86
USP11-206ENST00000469080 AJUBAQ96IF1 538 aa9.7□□□□□ -0.86
USP11-206ENST00000469080 VPS13CQ709C8 3753 aa9.69□□□□□ -0.86
USP11-206ENST00000469080 LOC389332A0A1B0GUA5 103 aa9.69□□□□□ -0.86
USP11-206ENST00000469080 TCRBV4S1A1TA0A5B7 111 aa9.69□□□□□ -0.86
USP11-206ENST00000469080 C11orf52Q96A22 123 aa9.69□□□□□ -0.86
USP11-206ENST00000469080 FLNAP21333 2647 aaKnown RBP9.69□□□□□ -0.86
USP11-206ENST00000469080 NDPQ00604 133 aa9.69□□□□□ -0.86
USP11-206ENST00000469080 NPIPB6E9PJ23 425 aa9.69□□□□□ -0.86
USP11-206ENST00000469080 SAA4P35542 130 aa9.69□□□□□ -0.86
USP11-206ENST00000469080 RASL11AQ6T310 242 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms