RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 ZFP30Q9Y2G7 519 aa5.99□□□□□ -1.45
HDAC6-216ENST00000468949 GOLT1BQ9Y3E0 138 aa5.99□□□□□ -1.45
HDAC6-216ENST00000468949 TGP01266 2768 aa5.99□□□□□ -1.45
HDAC6-216ENST00000468949 KIR2DL5BA0A0G2JN68 375 aa5.98□□□□□ -1.45
HDAC6-216ENST00000468949 KIR2DL5BA0A0G2JPC4 375 aa5.98□□□□□ -1.45
HDAC6-216ENST00000468949 TRBV7-9A0A0J9YWB2 115 aa5.98□□□□□ -1.45
HDAC6-216ENST00000468949 TRBV6-1A0A0K0K1D8 114 aa5.98□□□□□ -1.45
HDAC6-216ENST00000468949 K7EIL1 84 aa5.98□□□□□ -1.45
HDAC6-216ENST00000468949 UBE2CO00762 179 aa5.98□□□□□ -1.45
HDAC6-216ENST00000468949 LTAP01374 205 aa5.98□□□□□ -1.45
HDAC6-216ENST00000468949 FRMD6-AS1P0C7T7 363 aa5.98□□□□□ -1.45
HDAC6-216ENST00000468949 RNASE4P34096 147 aaKnown RBP5.98□□□□□ -1.45
HDAC6-216ENST00000468949 SRSF3P84103 164 aaKnown RBP5.98□□□□□ -1.45
HDAC6-216ENST00000468949 PRR27Q6MZM9 219 aa5.98□□□□□ -1.45
HDAC6-216ENST00000468949 KIR2DL5AQ8N109 375 aa5.98□□□□□ -1.45
HDAC6-216ENST00000468949 NHLRC2Q8NBF2 726 aa5.98□□□□□ -1.45
HDAC6-216ENST00000468949 KIR2DL5BQ8NHK3 375 aa5.98□□□□□ -1.45
HDAC6-216ENST00000468949 DAZAP1Q96EP5 407 aaKnown RBP5.98□□□□□ -1.45
HDAC6-216ENST00000468949 SMIM12Q96EX1 92 aa5.98□□□□□ -1.45
HDAC6-216ENST00000468949 DERL1Q9BUN8 251 aa5.98□□□□□ -1.45
HDAC6-216ENST00000468949 XCL2Q9UBD3 114 aa5.98□□□□□ -1.45
HDAC6-216ENST00000468949 TRAV12-2A0A075B6T6 113 aa5.97□□□□□ -1.45
HDAC6-216ENST00000468949 IGHV3OR16-12A0A075B7B8 117 aa5.97□□□□□ -1.45
HDAC6-216ENST00000468949 TRAV21A0A0B4J279 112 aa5.97□□□□□ -1.45
HDAC6-216ENST00000468949 C7orf71A4D174 169 aa5.97□□□□□ -1.45
HDAC6-216ENST00000468949 RBMY1BA6NDE4 496 aaKnown RBP5.97□□□□□ -1.45
HDAC6-216ENST00000468949 RBMY1EA6NEQ0 496 aaKnown RBP5.97□□□□□ -1.45
HDAC6-216ENST00000468949 A8MZ25 164 aa5.97□□□□□ -1.45
HDAC6-216ENST00000468949 C9JCJ5 164 aa5.97□□□□□ -1.45
HDAC6-216ENST00000468949 F8W036 122 aa5.97□□□□□ -1.45
HDAC6-216ENST00000468949 GCGP01275 180 aa5.97□□□□□ -1.45
HDAC6-216ENST00000468949 RBMY1DP0C7P1 496 aaKnown RBP5.97□□□□□ -1.45
HDAC6-216ENST00000468949 CTAG1AP78358 180 aa5.97□□□□□ -1.45
HDAC6-216ENST00000468949 TMEM183AQ8IXX5 376 aa5.97□□□□□ -1.45
HDAC6-216ENST00000468949 C8orf49Q96NF6 230 aa5.97□□□□□ -1.45
HDAC6-216ENST00000468949 ASCL2Q99929 193 aa5.97□□□□□ -1.45
HDAC6-216ENST00000468949 NAGKQ9UJ70 344 aa5.97□□□□□ -1.45
HDAC6-216ENST00000468949 KLF12Q9Y4X4 402 aa5.97□□□□□ -1.45
HDAC6-216ENST00000468949 TRAV12-3A0A0B4J271 114 aa5.96□□□□□ -1.46
HDAC6-216ENST00000468949 A8MTW9 85 aa5.96□□□□□ -1.46
HDAC6-216ENST00000468949 IGLV2-11P01706 119 aa5.96□□□□□ -1.46
HDAC6-216ENST00000468949 CRISP2P16562 243 aa5.96□□□□□ -1.46
HDAC6-216ENST00000468949 BTN1A1Q13410 526 aa5.96□□□□□ -1.46
HDAC6-216ENST00000468949 ADIRFQ15847 76 aa5.96□□□□□ -1.46
HDAC6-216ENST00000468949 TMEM241Q24JQ0 296 aa5.96□□□□□ -1.46
HDAC6-216ENST00000468949 DEFB135Q30KP9 77 aa5.96□□□□□ -1.46
HDAC6-216ENST00000468949 FAM162BQ5T6X4 162 aa5.96□□□□□ -1.46
HDAC6-216ENST00000468949 GFI1BQ5VTD9 330 aa5.96□□□□□ -1.46
HDAC6-216ENST00000468949 AMTNQ6UX39 209 aa5.96□□□□□ -1.46
HDAC6-216ENST00000468949 TMEM256Q8N2U0 113 aa5.96□□□□□ -1.46
HDAC6-216ENST00000468949 EIF4E3Q8N5X7 224 aaKnown RBP5.96□□□□□ -1.46
HDAC6-216ENST00000468949 IGF2BP2-AS1Q96M15 143 aa5.96□□□□□ -1.46
HDAC6-216ENST00000468949 RCHY1Q96PM5 261 aa5.96□□□□□ -1.46
HDAC6-216ENST00000468949 LINC01587Q99440 93 aa5.96□□□□□ -1.46
HDAC6-216ENST00000468949 C20orf144Q9BQM9 153 aa5.96□□□□□ -1.46
HDAC6-216ENST00000468949 NAT8Q9UHE5 227 aa5.96□□□□□ -1.46
HDAC6-216ENST00000468949 SORL1Q92673 2214 aa5.96□□□□□ -1.46
HDAC6-216ENST00000468949 KLLNB2CW77 178 aa5.95□□□□□ -1.46
HDAC6-216ENST00000468949 C9JQL5 133 aa5.95□□□□□ -1.46
HDAC6-216ENST00000468949 H7BYZ3 331 aa5.95□□□□□ -1.46
HDAC6-216ENST00000468949 PFN1P07737 140 aaKnown RBP5.95□□□□□ -1.46
HDAC6-216ENST00000468949 HTN1P15515 57 aa5.95□□□□□ -1.46
HDAC6-216ENST00000468949 OR5I1Q13606 314 aa5.95□□□□□ -1.46
HDAC6-216ENST00000468949 FAM159AQ6UWV7 190 aa5.95□□□□□ -1.46
HDAC6-216ENST00000468949 ZFAND2AQ8N6M9 145 aa5.95□□□□□ -1.46
HDAC6-216ENST00000468949 ZC2HC1AQ96GY0 325 aa5.95□□□□□ -1.46
HDAC6-216ENST00000468949 ZMAT4Q9H898 229 aa5.95□□□□□ -1.46
HDAC6-216ENST00000468949 LY96Q9Y6Y9 160 aa5.95□□□□□ -1.46
HDAC6-216ENST00000468949 TMEM218A2RU14 115 aa5.94□□□□□ -1.46
HDAC6-216ENST00000468949 XKRY2A2RUG3 117 aa5.94□□□□□ -1.46
HDAC6-216ENST00000468949 PGPEP1LA6NFU8 196 aa5.94□□□□□ -1.46
HDAC6-216ENST00000468949 CBY3A6NI87 242 aa5.94□□□□□ -1.46
HDAC6-216ENST00000468949 FABP5P3A8MUU1 101 aa5.94□□□□□ -1.46
HDAC6-216ENST00000468949 M0R036 132 aa5.94□□□□□ -1.46
HDAC6-216ENST00000468949 SH2D1AO60880 128 aa5.94□□□□□ -1.46
HDAC6-216ENST00000468949 P01737 135 aa5.94□□□□□ -1.46
HDAC6-216ENST00000468949 ORM1P02763 201 aa5.94□□□□□ -1.46
HDAC6-216ENST00000468949 ERVFC1-1P60608 527 aa5.94□□□□□ -1.46
HDAC6-216ENST00000468949 PNRC1Q12796 327 aaPredicted RBP5.94□□□□□ -1.46
HDAC6-216ENST00000468949 Q6AWC8 147 aa5.94□□□□□ -1.46
HDAC6-216ENST00000468949 Q6ZWC4 215 aa5.94□□□□□ -1.46
HDAC6-216ENST00000468949 C15orf54Q8N8G6 183 aa5.94□□□□□ -1.46
HDAC6-216ENST00000468949 TVP23CQ96ET8 276 aa5.94□□□□□ -1.46
HDAC6-216ENST00000468949 KCNS1Q96KK3 526 aa5.94□□□□□ -1.46
HDAC6-216ENST00000468949 FAM19A4Q96LR4 140 aa5.94□□□□□ -1.46
HDAC6-216ENST00000468949 B9D2Q9BPU9 175 aa5.94□□□□□ -1.46
HDAC6-216ENST00000468949 SPATA25Q9BR10 227 aa5.94□□□□□ -1.46
HDAC6-216ENST00000468949 PYGO2Q9BRQ0 406 aa5.94□□□□□ -1.46
HDAC6-216ENST00000468949 SDF2L1Q9HCN8 221 aa5.94□□□□□ -1.46
HDAC6-216ENST00000468949 TRBV20OR9-2A0A075B6H5 130 aa5.93□□□□□ -1.46
HDAC6-216ENST00000468949 TRGV11A0A075B6L2 103 aa5.93□□□□□ -1.46
HDAC6-216ENST00000468949 IGHV1OR15-1A0A075B7D0 117 aa5.93□□□□□ -1.46
HDAC6-216ENST00000468949 B4DEV8 164 aa5.93□□□□□ -1.46
HDAC6-216ENST00000468949 KRBOX1C9JBD0 128 aa5.93□□□□□ -1.46
HDAC6-216ENST00000468949 SPRY2O43597 315 aa5.93□□□□□ -1.46
HDAC6-216ENST00000468949 S100A4P26447 101 aaKnown RBP5.93□□□□□ -1.46
HDAC6-216ENST00000468949 RRN3P1Q2M238 152 aa5.93□□□□□ -1.46
HDAC6-216ENST00000468949 MUC21Q5SSG8 566 aa5.93□□□□□ -1.46
HDAC6-216ENST00000468949 IBA57Q5T440 356 aaKnown RBP5.93□□□□□ -1.46
HDAC6-216ENST00000468949 PRR9Q5T870 116 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms