RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 TVP23CQ96ET8 276 aa11.08□□□□□ -0.64
SNIP1-202ENST00000468040 LTAP01374 205 aa11.07□□□□□ -0.64
SNIP1-202ENST00000468040 RNASE4P34096 147 aaKnown RBP11.07□□□□□ -0.64
SNIP1-202ENST00000468040 NIPSNAP3BQ9BS92 247 aa11.07□□□□□ -0.64
SNIP1-202ENST00000468040 TMEM208Q9BTX3 173 aa11.07□□□□□ -0.64
SNIP1-202ENST00000468040 TRAV12-3A0A0B4J271 114 aa11.06□□□□□ -0.64
SNIP1-202ENST00000468040 BTN1A1Q13410 526 aa11.06□□□□□ -0.64
SNIP1-202ENST00000468040 KIR3DS1Q14943 382 aa11.06□□□□□ -0.64
SNIP1-202ENST00000468040 SMUG1Q53HV7 270 aa11.06□□□□□ -0.64
SNIP1-202ENST00000468040 ZNF705AQ6ZN79 300 aaPredicted RBP11.06□□□□□ -0.64
SNIP1-202ENST00000468040 OVOL2Q9BRP0 275 aa11.06□□□□□ -0.64
SNIP1-202ENST00000468040 DERL1Q9BUN8 251 aa11.06□□□□□ -0.64
SNIP1-202ENST00000468040 RAB19A4D1S5 217 aa11.05□□□□□ -0.64
SNIP1-202ENST00000468040 H7BYZ3 331 aa11.05□□□□□ -0.64
SNIP1-202ENST00000468040 PRR9Q5T870 116 aa11.05□□□□□ -0.64
SNIP1-202ENST00000468040 COX8CQ7Z4L0 72 aa11.05□□□□□ -0.64
SNIP1-202ENST00000468040 BAGE2Q86Y30 109 aa11.05□□□□□ -0.64
SNIP1-202ENST00000468040 TMEM183AQ8IXX5 376 aa11.05□□□□□ -0.64
SNIP1-202ENST00000468040 C1orf158Q8N1D5 194 aa11.05□□□□□ -0.64
SNIP1-202ENST00000468040 OR11H2Q8NH07 326 aa11.05□□□□□ -0.64
SNIP1-202ENST00000468040 SMIM12Q96EX1 92 aa11.05□□□□□ -0.64
SNIP1-202ENST00000468040 C8orf49Q96NF6 230 aa11.05□□□□□ -0.64
SNIP1-202ENST00000468040 RETNQ9HD89 108 aa11.05□□□□□ -0.64
SNIP1-202ENST00000468040 IGHV3OR16-12A0A075B7B8 117 aa11.04□□□□□ -0.64
SNIP1-202ENST00000468040 SRP19P09132 144 aaKnown RBP11.04□□□□□ -0.64
SNIP1-202ENST00000468040 RBMY1A1P0DJD3 496 aaKnown RBP11.04□□□□□ -0.64
SNIP1-202ENST00000468040 RBMY1CP0DJD4 496 aa11.04□□□□□ -0.64
SNIP1-202ENST00000468040 GNG4P50150 75 aa11.04□□□□□ -0.64
SNIP1-202ENST00000468040 RBMY1FQ15415 496 aaKnown RBP11.04□□□□□ -0.64
SNIP1-202ENST00000468040 CENPWQ5EE01 88 aa11.04□□□□□ -0.64
SNIP1-202ENST00000468040 Q6AWC8 147 aa11.04□□□□□ -0.64
SNIP1-202ENST00000468040 LINC01587Q99440 93 aa11.04□□□□□ -0.64
SNIP1-202ENST00000468040 PYGO2Q9BRQ0 406 aa11.04□□□□□ -0.64
SNIP1-202ENST00000468040 PARLQ9H300 379 aa11.04□□□□□ -0.64
SNIP1-202ENST00000468040 TRAV21A0A0B4J279 112 aa11.03□□□□□ -0.64
SNIP1-202ENST00000468040 SMIM9A6NGZ8 99 aa11.03□□□□□ -0.64
SNIP1-202ENST00000468040 C9JCJ5 164 aa11.03□□□□□ -0.64
SNIP1-202ENST00000468040 ZNF324O75467 553 aaPredicted RBP11.03□□□□□ -0.64
SNIP1-202ENST00000468040 GCGP01275 180 aa11.03□□□□□ -0.64
SNIP1-202ENST00000468040 CEBPGP53567 150 aa11.03□□□□□ -0.64
SNIP1-202ENST00000468040 NEU1Q99519 415 aa11.03□□□□□ -0.64
SNIP1-202ENST00000468040 PFN1P07737 140 aaKnown RBP11.02□□□□□ -0.65
SNIP1-202ENST00000468040 MIFP14174 115 aa11.02□□□□□ -0.65
SNIP1-202ENST00000468040 SRSF3P84103 164 aaKnown RBP11.02□□□□□ -0.65
SNIP1-202ENST00000468040 ZNF674Q2M3X9 581 aa11.02□□□□□ -0.65
SNIP1-202ENST00000468040 MLST8Q9BVC4 326 aa11.02□□□□□ -0.65
SNIP1-202ENST00000468040 X6R8D5 127 aa11.02□□□□□ -0.65
SNIP1-202ENST00000468040 TRBV20OR9-2A0A075B6H5 130 aa11.01□□□□□ -0.65
SNIP1-202ENST00000468040 C9JQL5 133 aa11.01□□□□□ -0.65
SNIP1-202ENST00000468040 RRN3P1Q2M238 152 aa11.01□□□□□ -0.65
SNIP1-202ENST00000468040 FAM162BQ5T6X4 162 aa11.01□□□□□ -0.65
SNIP1-202ENST00000468040 NHLRC2Q8NBF2 726 aa11.01□□□□□ -0.65
SNIP1-202ENST00000468040 ZC2HC1AQ96GY0 325 aa11.01□□□□□ -0.65
SNIP1-202ENST00000468040 SMIM7Q9BQ49 75 aa11.01□□□□□ -0.65
SNIP1-202ENST00000468040 LINC00467Q9BRT7 94 aa11.01□□□□□ -0.65
SNIP1-202ENST00000468040 LINC00862A6NCI5 91 aa11□□□□□ -0.65
SNIP1-202ENST00000468040 FABP5P3A8MUU1 101 aa11□□□□□ -0.65
SNIP1-202ENST00000468040 ZNF727A8MUV8 499 aa11□□□□□ -0.65
SNIP1-202ENST00000468040 ZNF80P51504 273 aaPredicted RBP11□□□□□ -0.65
SNIP1-202ENST00000468040 FAM74A3Q4VXF1 159 aa11□□□□□ -0.65
SNIP1-202ENST00000468040 UQCC3Q6UW78 93 aa11□□□□□ -0.65
SNIP1-202ENST00000468040 FAM159AQ6UWV7 190 aa11□□□□□ -0.65
SNIP1-202ENST00000468040 BIN3Q9NQY0 253 aa11□□□□□ -0.65
SNIP1-202ENST00000468040 IGHV1OR15-1A0A075B7D0 117 aa10.99□□□□□ -0.65
SNIP1-202ENST00000468040 HTN1P15515 57 aa10.99□□□□□ -0.65
SNIP1-202ENST00000468040 COMMD7Q86VX2 200 aa10.99□□□□□ -0.65
SNIP1-202ENST00000468040 EIF4E3Q8N5X7 224 aaKnown RBP10.99□□□□□ -0.65
SNIP1-202ENST00000468040 NAGKQ9UJ70 344 aa10.99□□□□□ -0.65
SNIP1-202ENST00000468040 U3KQK5 164 aa10.99□□□□□ -0.65
SNIP1-202ENST00000468040 CBY3A6NI87 242 aa10.98□□□□□ -0.65
SNIP1-202ENST00000468040 ZNF705GA8MUZ8 300 aaPredicted RBP10.98□□□□□ -0.65
SNIP1-202ENST00000468040 IGLV2-8P01709 118 aa10.98□□□□□ -0.65
SNIP1-202ENST00000468040 MGST1P10620 155 aaKnown RBP10.98□□□□□ -0.65
SNIP1-202ENST00000468040 CRIP1P50238 77 aa10.98□□□□□ -0.65
SNIP1-202ENST00000468040 TDRG1Q3Y452 100 aa10.98□□□□□ -0.65
SNIP1-202ENST00000468040 ANXA2RQ3ZCQ2 193 aa10.98□□□□□ -0.65
SNIP1-202ENST00000468040 SOHLH1Q5JUK2 328 aa10.98□□□□□ -0.65
SNIP1-202ENST00000468040 MUC21Q5SSG8 566 aa10.98□□□□□ -0.65
SNIP1-202ENST00000468040 Q6ZQT7 251 aa10.98□□□□□ -0.65
SNIP1-202ENST00000468040 ZNF493Q6ZR52 646 aa10.98□□□□□ -0.65
SNIP1-202ENST00000468040 Q8NAQ8 132 aa10.98□□□□□ -0.65
SNIP1-202ENST00000468040 TMEM263Q8WUH6 116 aaKnown RBP10.98□□□□□ -0.65
SNIP1-202ENST00000468040 C16orf74Q96GX8 76 aa10.98□□□□□ -0.65
SNIP1-202ENST00000468040 KCNS1Q96KK3 526 aa10.98□□□□□ -0.65
SNIP1-202ENST00000468040 LY96Q9Y6Y9 160 aa10.98□□□□□ -0.65
SNIP1-202ENST00000468040 IGHV4-28A0A0C4DH34 117 aa10.97□□□□□ -0.65
SNIP1-202ENST00000468040 TMEM189A5PLL7 270 aa10.97□□□□□ -0.65
SNIP1-202ENST00000468040 PGPEP1LA6NFU8 196 aa10.97□□□□□ -0.65
SNIP1-202ENST00000468040 SH2D1AO60880 128 aa10.97□□□□□ -0.65
SNIP1-202ENST00000468040 PRR27Q6MZM9 219 aa10.97□□□□□ -0.65
SNIP1-202ENST00000468040 C11orf68Q9H3H3 251 aaKnown RBP10.97□□□□□ -0.65
SNIP1-202ENST00000468040 SFTA3P0C7M3 94 aa10.96□□□□□ -0.65
SNIP1-202ENST00000468040 OCC1Q8TAD7 63 aa10.96□□□□□ -0.65
SNIP1-202ENST00000468040 RNASE8Q8TDE3 154 aaKnown RBP10.96□□□□□ -0.65
SNIP1-202ENST00000468040 SDF2L1Q9HCN8 221 aa10.96□□□□□ -0.65
SNIP1-202ENST00000468040 TRGV11A0A075B6L2 103 aa10.95□□□□□ -0.66
SNIP1-202ENST00000468040 ORM1P02763 201 aa10.95□□□□□ -0.66
SNIP1-202ENST00000468040 PRM2P04554 102 aa10.95□□□□□ -0.66
SNIP1-202ENST00000468040 AZU1P20160 251 aa10.95□□□□□ -0.66
SNIP1-202ENST00000468040 TMEM241Q24JQ0 296 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms