RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 GAGE1Q13065 139 aa7.64□□□□□ -1.19
UBR4-210ENST00000466969 GAGE4Q13068 117 aa7.64□□□□□ -1.19
UBR4-210ENST00000466969 GAGE5Q13069 117 aa7.64□□□□□ -1.19
UBR4-210ENST00000466969 GAGE13Q4V321 117 aa7.64□□□□□ -1.19
UBR4-210ENST00000466969 SAMD12Q8N8I0 201 aa7.64□□□□□ -1.19
UBR4-210ENST00000466969 YIPF6Q96EC8 236 aa7.64□□□□□ -1.19
UBR4-210ENST00000466969 RBKSQ9H477 322 aa7.64□□□□□ -1.19
UBR4-210ENST00000466969 IGLV1-50A0A075B6I6 118 aa7.63□□□□□ -1.19
UBR4-210ENST00000466969 TRAV1-1A0A0B4J248 108 aa7.63□□□□□ -1.19
UBR4-210ENST00000466969 CDS2O95674 445 aa7.63□□□□□ -1.19
UBR4-210ENST00000466969 CFC1BP0CG36 223 aa7.63□□□□□ -1.19
UBR4-210ENST00000466969 SULT1A3P0DMM9 295 aa7.63□□□□□ -1.19
UBR4-210ENST00000466969 SULT1A4P0DMN0 295 aa7.63□□□□□ -1.19
UBR4-210ENST00000466969 COX6A2Q02221 97 aa7.63□□□□□ -1.19
UBR4-210ENST00000466969 C4orf46Q504U0 113 aa7.63□□□□□ -1.19
UBR4-210ENST00000466969 DMRTA1Q5VZB9 504 aa7.63□□□□□ -1.19
UBR4-210ENST00000466969 CYP2G1PQ6ZSU1 146 aa7.63□□□□□ -1.19
UBR4-210ENST00000466969 ZFAND2AQ8N6M9 145 aa7.63□□□□□ -1.19
UBR4-210ENST00000466969 ZFAND1Q8TCF1 268 aa7.63□□□□□ -1.19
UBR4-210ENST00000466969 NRG4Q8WWG1 115 aa7.63□□□□□ -1.19
UBR4-210ENST00000466969 CNBD2Q96M20 576 aa7.63□□□□□ -1.19
UBR4-210ENST00000466969 AGPAT4-IT1Q9H0P7 198 aa7.63□□□□□ -1.19
UBR4-210ENST00000466969 MGST1P10620 155 aaKnown RBP7.62□□□□□ -1.19
UBR4-210ENST00000466969 ZNF138P52744 262 aa7.62□□□□□ -1.19
UBR4-210ENST00000466969 PLP1P60201 277 aa7.62□□□□□ -1.19
UBR4-210ENST00000466969 RNASE10Q5GAN6 216 aaKnown RBP7.62□□□□□ -1.19
UBR4-210ENST00000466969 FAM159AQ6UWV7 190 aa7.62□□□□□ -1.19
UBR4-210ENST00000466969 LHFPL1Q86WI0 220 aa7.62□□□□□ -1.19
UBR4-210ENST00000466969 ARV1Q9H2C2 271 aa7.62□□□□□ -1.19
UBR4-210ENST00000466969 HSPB7Q9UBY9 170 aa7.62□□□□□ -1.19
UBR4-210ENST00000466969 SYNE2Q8WXH0 6885 aaKnown RBP7.62□□□□□ -1.19
UBR4-210ENST00000466969 SMIM31A0A1B0GVY4 71 aa7.61□□□□□ -1.19
UBR4-210ENST00000466969 NDUFS6O75380 124 aaKnown RBP7.61□□□□□ -1.19
UBR4-210ENST00000466969 TSPAN13O95857 204 aa7.61□□□□□ -1.19
UBR4-210ENST00000466969 INPP1P49441 399 aa7.61□□□□□ -1.19
UBR4-210ENST00000466969 TMEM78Q5T7P6 136 aa7.61□□□□□ -1.19
UBR4-210ENST00000466969 SNX29P2Q8IUI4 249 aa7.61□□□□□ -1.19
UBR4-210ENST00000466969 SELENOHQ8IZQ5 122 aaKnown RBP7.61□□□□□ -1.19
UBR4-210ENST00000466969 MARCH1Q8TCQ1 289 aa7.61□□□□□ -1.19
UBR4-210ENST00000466969 MRPL53Q96EL3 112 aaKnown RBP7.61□□□□□ -1.19
UBR4-210ENST00000466969 SAT2Q96F10 170 aaPredicted RBP7.61□□□□□ -1.19
UBR4-210ENST00000466969 ARL6Q9H0F7 186 aa7.61□□□□□ -1.19
UBR4-210ENST00000466969 UBE2D1P51668 147 aa7.6□□□□□ -1.19
UBR4-210ENST00000466969 MIAQ16674 131 aa7.6□□□□□ -1.19
UBR4-210ENST00000466969 TMEM268Q5VZI3 342 aa7.6□□□□□ -1.19
UBR4-210ENST00000466969 LINC00305Q7Z4B0 112 aa7.6□□□□□ -1.19
UBR4-210ENST00000466969 C15orf54Q8N8G6 183 aa7.6□□□□□ -1.19
UBR4-210ENST00000466969 C20orf85Q9H1P6 137 aa7.6□□□□□ -1.19
UBR4-210ENST00000466969 VCX3BQ9H321 246 aa7.6□□□□□ -1.19
UBR4-210ENST00000466969 TMEM262E9PQX1 116 aa7.59□□□□□ -1.19
UBR4-210ENST00000466969 M0R3E3 92 aa7.59□□□□□ -1.19
UBR4-210ENST00000466969 TBPP20226 339 aa7.59□□□□□ -1.19
UBR4-210ENST00000466969 SELENOTP62341 195 aa7.59□□□□□ -1.19
UBR4-210ENST00000466969 CFAP126Q5VTH2 177 aa7.59□□□□□ -1.19
UBR4-210ENST00000466969 ZNF546Q86UE3 836 aa7.59□□□□□ -1.19
UBR4-210ENST00000466969 FER1L6-AS1Q8NA97 138 aa7.59□□□□□ -1.19
UBR4-210ENST00000466969 OR13C8Q8NGS7 320 aa7.59□□□□□ -1.19
UBR4-210ENST00000466969 NAA60Q9H7X0 242 aa7.59□□□□□ -1.19
UBR4-210ENST00000466969 SLC39A9Q9NUM3 307 aa7.59□□□□□ -1.19
UBR4-210ENST00000466969 C14orf166Q9Y224 244 aaKnown RBP7.59□□□□□ -1.19
UBR4-210ENST00000466969 H3BQ15 152 aa7.58□□□□□ -1.2
UBR4-210ENST00000466969 ANGP03950 147 aaKnown RBP7.58□□□□□ -1.2
UBR4-210ENST00000466969 SLPIP03973 132 aa7.58□□□□□ -1.2
UBR4-210ENST00000466969 LINC00694P0DN24 101 aa7.58□□□□□ -1.2
UBR4-210ENST00000466969 IGLC2P0DOY2 106 aa7.58□□□□□ -1.2
UBR4-210ENST00000466969 SCGB2B2Q4G0G5 96 aa7.58□□□□□ -1.2
UBR4-210ENST00000466969 PATE2Q6UY27 113 aa7.58□□□□□ -1.2
UBR4-210ENST00000466969 GLYATL2Q8WU03 294 aa7.58□□□□□ -1.2
UBR4-210ENST00000466969 DIRC1Q969H9 104 aa7.58□□□□□ -1.2
UBR4-210ENST00000466969 ATP5SQ99766 215 aa7.58□□□□□ -1.2
UBR4-210ENST00000466969 SMCO3A2RU48 225 aa7.57□□□□□ -1.2
UBR4-210ENST00000466969 APOA1P02647 267 aa7.57□□□□□ -1.2
UBR4-210ENST00000466969 HIST1H1EP10412 219 aaKnown RBP7.57□□□□□ -1.2
UBR4-210ENST00000466969 AKR1C4P17516 323 aa7.57□□□□□ -1.2
UBR4-210ENST00000466969 RPL13AP40429 203 aaKnown RBP7.57□□□□□ -1.2
UBR4-210ENST00000466969 SURF2Q15527 256 aaPredicted RBP7.57□□□□□ -1.2
UBR4-210ENST00000466969 PRSS3P2Q8NHM4 247 aa7.57□□□□□ -1.2
UBR4-210ENST00000466969 TERB2Q8NHR7 220 aa7.57□□□□□ -1.2
UBR4-210ENST00000466969 NAGKQ9UJ70 344 aa7.57□□□□□ -1.2
UBR4-210ENST00000466969 CD3DP04234 171 aa7.56□□□□□ -1.2
UBR4-210ENST00000466969 IAPPP10997 89 aa7.56□□□□□ -1.2
UBR4-210ENST00000466969 FGF8P55075 233 aaPredicted RBP7.56□□□□□ -1.2
UBR4-210ENST00000466969 RPP30P78346 268 aaKnown RBP7.56□□□□□ -1.2
UBR4-210ENST00000466969 SMCO1Q147U7 214 aa7.56□□□□□ -1.2
UBR4-210ENST00000466969 ZNF876PQ49A33 203 aa7.56□□□□□ -1.2
UBR4-210ENST00000466969 IZUMO2Q6UXV1 221 aa7.56□□□□□ -1.2
UBR4-210ENST00000466969 ZNF492Q9P255 531 aa7.56□□□□□ -1.2
UBR4-210ENST00000466969 PRELID1Q9Y255 219 aa7.56□□□□□ -1.2
UBR4-210ENST00000466969 LINC00474Q9P2X8 69 aa7.55□□□□□ -1.2
UBR4-210ENST00000466969 IGLV10-54A0A075B6I4 117 aa7.54□□□□□ -1.2
UBR4-210ENST00000466969 IGKV2-40A0A087WW87 121 aaPredicted RBP7.54□□□□□ -1.2
UBR4-210ENST00000466969 PRSS46E5RG02 174 aa7.54□□□□□ -1.2
UBR4-210ENST00000466969 GNRH2O43555 120 aa7.54□□□□□ -1.2
UBR4-210ENST00000466969 IGKV2D-40P01614 121 aaPredicted RBP7.54□□□□□ -1.2
UBR4-210ENST00000466969 HOXB5P09067 269 aa7.54□□□□□ -1.2
UBR4-210ENST00000466969 RPS19P39019 145 aaKnown RBP7.54□□□□□ -1.2
UBR4-210ENST00000466969 TPRXLQ17RH7 258 aa7.54□□□□□ -1.2
UBR4-210ENST00000466969 PXDC1Q5TGL8 231 aa7.54□□□□□ -1.2
UBR4-210ENST00000466969 COMMD3Q9UBI1 195 aa7.54□□□□□ -1.2
UBR4-210ENST00000466969 RAB26Q9ULW5 256 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms