RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 PLGLB1Q02325 96 aa1.39□□□□□ -2.19
CDC42BPA-211ENST00000466538 PDE6HQ13956 83 aa1.39□□□□□ -2.19
CDC42BPA-211ENST00000466538 OCIAD2Q56VL3 154 aa1.39□□□□□ -2.19
CDC42BPA-211ENST00000466538 RNASE10Q5GAN6 216 aaKnown RBP1.39□□□□□ -2.19
CDC42BPA-211ENST00000466538 OR4B1Q8NGF8 309 aa1.39□□□□□ -2.19
CDC42BPA-211ENST00000466538 CLEC2BQ92478 149 aa1.39□□□□□ -2.19
CDC42BPA-211ENST00000466538 MAGOHBQ96A72 148 aaKnown RBP1.39□□□□□ -2.19
CDC42BPA-211ENST00000466538 C14orf144Q96I85 54 aa1.39□□□□□ -2.19
CDC42BPA-211ENST00000466538 C12orf57Q99622 126 aa1.39□□□□□ -2.19
CDC42BPA-211ENST00000466538 SLC35B3Q9H1N7 401 aa1.39□□□□□ -2.19
CDC42BPA-211ENST00000466538 C14orf132Q9NPU4 83 aa1.39□□□□□ -2.19
CDC42BPA-211ENST00000466538 MYH9P35579 1960 aaKnown RBP1.39□□□□□ -2.19
CDC42BPA-211ENST00000466538 TRPM7Q96QT4 1865 aa1.39□□□□□ -2.19
CDC42BPA-211ENST00000466538 CCNB3Q8WWL7 1395 aa1.38□□□□□ -2.19
CDC42BPA-211ENST00000466538 TRAV12-1A0A0B4J245 112 aa1.38□□□□□ -2.19
CDC42BPA-211ENST00000466538 hDV103S1A0JD37 113 aa1.38□□□□□ -2.19
CDC42BPA-211ENST00000466538 C2orf70A6NJV1 201 aa1.38□□□□□ -2.19
CDC42BPA-211ENST00000466538 E7EUB6 86 aa1.38□□□□□ -2.19
CDC42BPA-211ENST00000466538 K7ERU9 68 aa1.38□□□□□ -2.19
CDC42BPA-211ENST00000466538 SMIM24O75264 130 aa1.38□□□□□ -2.19
CDC42BPA-211ENST00000466538 PROSCO94903 275 aa1.38□□□□□ -2.19
CDC42BPA-211ENST00000466538 SAA1P0DJI8 122 aaPredicted RBP1.38□□□□□ -2.19
CDC42BPA-211ENST00000466538 ZNF25P17030 456 aaPredicted RBP1.38□□□□□ -2.19
CDC42BPA-211ENST00000466538 DSCR4P56555 118 aaPredicted RBP1.38□□□□□ -2.19
CDC42BPA-211ENST00000466538 BLCAPP62952 87 aa1.38□□□□□ -2.19
CDC42BPA-211ENST00000466538 MMGT1Q8N4V1 131 aa1.38□□□□□ -2.19
CDC42BPA-211ENST00000466538 LINC00301Q8NCQ3 95 aa1.38□□□□□ -2.19
CDC42BPA-211ENST00000466538 OR5D14Q8NGL3 314 aa1.38□□□□□ -2.19
CDC42BPA-211ENST00000466538 TMEM203Q969S6 136 aa1.38□□□□□ -2.19
CDC42BPA-211ENST00000466538 COA4Q9NYJ1 87 aa1.38□□□□□ -2.19
CDC42BPA-211ENST00000466538 METTL1Q9UBP6 276 aaKnown RBP1.38□□□□□ -2.19
CDC42BPA-211ENST00000466538 LY96Q9Y6Y9 160 aa1.38□□□□□ -2.19
CDC42BPA-211ENST00000466538 FREM1Q5H8C1 2179 aa1.38□□□□□ -2.19
CDC42BPA-211ENST00000466538 HEATR5BQ9P2D3 2071 aa1.38□□□□□ -2.19
CDC42BPA-211ENST00000466538 PRRC2BQ5JSZ5 2229 aaKnown RBP1.38□□□□□ -2.19
CDC42BPA-211ENST00000466538 PLXNA2O75051 1894 aa1.37□□□□□ -2.19
CDC42BPA-211ENST00000466538 MUC4Q99102 2169 aa1.37□□□□□ -2.19
CDC42BPA-211ENST00000466538 CEP192Q8TEP8 1941 aa1.37□□□□□ -2.19
CDC42BPA-211ENST00000466538 C17orf112F2Z3M2 114 aa1.37□□□□□ -2.19
CDC42BPA-211ENST00000466538 M0R129 80 aa1.37□□□□□ -2.19
CDC42BPA-211ENST00000466538 LYRM1O43325 122 aa1.37□□□□□ -2.19
CDC42BPA-211ENST00000466538 UBL3O95164 117 aa1.37□□□□□ -2.19
CDC42BPA-211ENST00000466538 APODP05090 189 aa1.37□□□□□ -2.19
CDC42BPA-211ENST00000466538 WHAMMP3Q1A5X7 153 aa1.37□□□□□ -2.19
CDC42BPA-211ENST00000466538 ASB16-AS1Q495Z4 193 aa1.37□□□□□ -2.19
CDC42BPA-211ENST00000466538 IDO2Q6ZQW0 420 aa1.37□□□□□ -2.19
CDC42BPA-211ENST00000466538 Q8TAT8 98 aa1.37□□□□□ -2.19
CDC42BPA-211ENST00000466538 DPH3Q96FX2 82 aa1.37□□□□□ -2.19
CDC42BPA-211ENST00000466538 OR4C12Q96R67 309 aa1.37□□□□□ -2.19
CDC42BPA-211ENST00000466538 TMEM191AQ9H0A3 160 aa1.37□□□□□ -2.19
CDC42BPA-211ENST00000466538 SNURFQ9Y675 71 aa1.37□□□□□ -2.19
CDC42BPA-211ENST00000466538 BAZ2BQ9UIF8 2168 aaKnown RBP1.37□□□□□ -2.19
CDC42BPA-211ENST00000466538 A2ML1A8K2U0 1454 aa1.37□□□□□ -2.19
CDC42BPA-211ENST00000466538 CASZ1Q86V15 1759 aa1.36□□□□□ -2.19
CDC42BPA-211ENST00000466538 TRBV20-1A0A075B6N2 111 aa1.36□□□□□ -2.19
CDC42BPA-211ENST00000466538 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.36□□□□□ -2.19
CDC42BPA-211ENST00000466538 C5orf67F2Z3F1 127 aa1.36□□□□□ -2.19
CDC42BPA-211ENST00000466538 CCDC179H3BU77 68 aa1.36□□□□□ -2.19
CDC42BPA-211ENST00000466538 TPT1P13693 172 aaKnown RBP1.36□□□□□ -2.19
CDC42BPA-211ENST00000466538 ZNF833PQ6ZTB9 187 aa1.36□□□□□ -2.19
CDC42BPA-211ENST00000466538 ARPINQ7Z6K5 226 aa1.36□□□□□ -2.19
CDC42BPA-211ENST00000466538 C15orf53Q8NAA6 179 aa1.36□□□□□ -2.19
CDC42BPA-211ENST00000466538 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.36□□□□□ -2.19
CDC42BPA-211ENST00000466538 OR2T35Q8NGX2 323 aa1.36□□□□□ -2.19
CDC42BPA-211ENST00000466538 OTOSQ8NHW6 89 aa1.36□□□□□ -2.19
CDC42BPA-211ENST00000466538 RAB37Q96AX2 223 aa1.36□□□□□ -2.19
CDC42BPA-211ENST00000466538 SCN3AQ9NY46 2000 aa1.36□□□□□ -2.19
CDC42BPA-211ENST00000466538 LAMB4A4D0S4 1761 aa1.36□□□□□ -2.19
CDC42BPA-211ENST00000466538 ANK1P16157 1881 aa1.35□□□□□ -2.19
CDC42BPA-211ENST00000466538 CNTLNQ9NXG0 1405 aa1.35□□□□□ -2.19
CDC42BPA-211ENST00000466538 FAM92AA1XBS5 289 aa1.35□□□□□ -2.19
CDC42BPA-211ENST00000466538 M0R233 179 aa1.35□□□□□ -2.19
CDC42BPA-211ENST00000466538 M0R2P5 195 aa1.35□□□□□ -2.19
CDC42BPA-211ENST00000466538 CORTO00230 105 aa1.35□□□□□ -2.19
CDC42BPA-211ENST00000466538 CNBPP62633 177 aaKnown RBP1.35□□□□□ -2.19
CDC42BPA-211ENST00000466538 BTG2P78543 158 aa1.35□□□□□ -2.19
CDC42BPA-211ENST00000466538 CLLU1Q5K131 121 aa1.35□□□□□ -2.19
CDC42BPA-211ENST00000466538 SCIMPQ6UWF3 145 aa1.35□□□□□ -2.19
CDC42BPA-211ENST00000466538 IZUMO2Q6UXV1 221 aa1.35□□□□□ -2.19
CDC42BPA-211ENST00000466538 ZCCHC23Q6ZST2 131 aa1.35□□□□□ -2.19
CDC42BPA-211ENST00000466538 OR5AS1Q8N127 324 aa1.35□□□□□ -2.19
CDC42BPA-211ENST00000466538 C10orf111Q8N326 155 aa1.35□□□□□ -2.19
CDC42BPA-211ENST00000466538 SCN3BQ9NY72 215 aa1.35□□□□□ -2.19
CDC42BPA-211ENST00000466538 TPRKBQ9Y3C4 175 aa1.35□□□□□ -2.19
CDC42BPA-211ENST00000466538 PCDH15Q96QU1 1955 aa1.35□□□□□ -2.19
CDC42BPA-211ENST00000466538 VPS8Q8N3P4 1428 aa1.34□□□□□ -2.19
CDC42BPA-211ENST00000466538 LRP5O75197 1615 aa1.34□□□□□ -2.19
CDC42BPA-211ENST00000466538 A0A0G2JMM0 328 aa1.34□□□□□ -2.19
CDC42BPA-211ENST00000466538 LOC107986453A0A1B0GWG9 222 aa1.34□□□□□ -2.19
CDC42BPA-211ENST00000466538 A0A1W2PPB8 328 aa1.34□□□□□ -2.19
CDC42BPA-211ENST00000466538 KIR3DP1A8MWS1 328 aa1.34□□□□□ -2.19
CDC42BPA-211ENST00000466538 FAM25AB3EWG3 89 aa1.34□□□□□ -2.19
CDC42BPA-211ENST00000466538 FAM25CB3EWG5 89 aa1.34□□□□□ -2.19
CDC42BPA-211ENST00000466538 FAM25GB3EWG6 89 aa1.34□□□□□ -2.19
CDC42BPA-211ENST00000466538 F6UZH7 168 aa1.34□□□□□ -2.19
CDC42BPA-211ENST00000466538 HYPMO75409 117 aa1.34□□□□□ -2.19
CDC42BPA-211ENST00000466538 TRACP01848 142 aa1.34□□□□□ -2.19
CDC42BPA-211ENST00000466538 SMIM6P0DI80 62 aa1.34□□□□□ -2.19
CDC42BPA-211ENST00000466538 HIST1H1BP16401 226 aaKnown RBP1.34□□□□□ -2.19
CDC42BPA-211ENST00000466538 FGF7P21781 194 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms