RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 FABP5P3A8MUU1 101 aa10.27□□□□□ -0.77
UBE4B-206ENST00000466379 F6UB75 175 aa10.27□□□□□ -0.77
UBE4B-206ENST00000466379 M0QZ24 198 aa10.27□□□□□ -0.77
UBE4B-206ENST00000466379 C9orf47Q6ZRZ4 202 aa10.27□□□□□ -0.77
UBE4B-206ENST00000466379 CUBNO60494 3623 aa10.26□□□□□ -0.77
UBE4B-206ENST00000466379 ELANEP08246 267 aa10.26□□□□□ -0.77
UBE4B-206ENST00000466379 LGALS1P09382 135 aaKnown RBP10.26□□□□□ -0.77
UBE4B-206ENST00000466379 WFDC3Q8IUB2 231 aa10.26□□□□□ -0.77
UBE4B-206ENST00000466379 FAM19A2Q8N3H0 131 aa10.26□□□□□ -0.77
UBE4B-206ENST00000466379 RNF114Q9Y508 228 aa10.26□□□□□ -0.77
UBE4B-206ENST00000466379 LOC102724200A0A096LPH7 203 aaPredicted RBP10.26□□□□□ -0.77
UBE4B-206ENST00000466379 SYNJ2BPP57105 145 aa10.26□□□□□ -0.77
UBE4B-206ENST00000466379 PAFAH1B2P68402 229 aa10.26□□□□□ -0.77
UBE4B-206ENST00000466379 KRTAP1-1Q07627 177 aa10.26□□□□□ -0.77
UBE4B-206ENST00000466379 KLF5Q13887 457 aaPredicted RBP10.26□□□□□ -0.77
UBE4B-206ENST00000466379 PRR9Q5T870 116 aa10.26□□□□□ -0.77
UBE4B-206ENST00000466379 Q6AWC8 147 aa10.26□□□□□ -0.77
UBE4B-206ENST00000466379 MYOZ3Q8TDC0 251 aa10.26□□□□□ -0.77
UBE4B-206ENST00000466379 BORCS7Q96B45 105 aa10.26□□□□□ -0.77
UBE4B-206ENST00000466379 C11orf21Q9P2W6 132 aa10.26□□□□□ -0.77
UBE4B-206ENST00000466379 ITPR2Q14571 2701 aa10.26□□□□□ -0.77
UBE4B-206ENST00000466379 AKAP9Q99996 3911 aa10.25□□□□□ -0.77
UBE4B-206ENST00000466379 K7EMT4 169 aa10.25□□□□□ -0.77
UBE4B-206ENST00000466379 GPX1P07203 203 aa10.25□□□□□ -0.77
UBE4B-206ENST00000466379 AMTP48728 403 aa10.25□□□□□ -0.77
UBE4B-206ENST00000466379 DEFB136Q30KP8 78 aa10.25□□□□□ -0.77
UBE4B-206ENST00000466379 FER1L6-AS1Q8NA97 138 aa10.25□□□□□ -0.77
UBE4B-206ENST00000466379 UFC1Q9Y3C8 167 aa10.25□□□□□ -0.77
UBE4B-206ENST00000466379 SCGB1D1O95968 90 aa10.24□□□□□ -0.77
UBE4B-206ENST00000466379 NTF3P20783 257 aa10.24□□□□□ -0.77
UBE4B-206ENST00000466379 TFPI2P48307 235 aa10.24□□□□□ -0.77
UBE4B-206ENST00000466379 RNASEKQ6P5S7 137 aaKnown RBP10.24□□□□□ -0.77
UBE4B-206ENST00000466379 IGKV3D-20A0A0C4DH25 116 aa10.24□□□□□ -0.77
UBE4B-206ENST00000466379 LINC00587B1AMM8 73 aa10.24□□□□□ -0.77
UBE4B-206ENST00000466379 RPS20P60866 119 aaKnown RBP10.24□□□□□ -0.77
UBE4B-206ENST00000466379 HIST1H1AQ02539 215 aaPredicted RBP10.24□□□□□ -0.77
UBE4B-206ENST00000466379 Q8N2B8 174 aa10.24□□□□□ -0.77
UBE4B-206ENST00000466379 KLHDC1Q8N7A1 406 aa10.24□□□□□ -0.77
UBE4B-206ENST00000466379 URB1-AS1Q96HZ7 61 aa10.24□□□□□ -0.77
UBE4B-206ENST00000466379 UBE2E2Q96LR5 201 aa10.24□□□□□ -0.77
UBE4B-206ENST00000466379 YAE1D1Q9NRH1 226 aa10.24□□□□□ -0.77
UBE4B-206ENST00000466379 CLEC5AQ9NY25 188 aa10.24□□□□□ -0.77
UBE4B-206ENST00000466379 DNAJC9-AS1A6NH13 148 aa10.23□□□□□ -0.77
UBE4B-206ENST00000466379 ZNF324O75467 553 aaPredicted RBP10.23□□□□□ -0.77
UBE4B-206ENST00000466379 IGLC6P0CF74 106 aa10.23□□□□□ -0.77
UBE4B-206ENST00000466379 HOXD3P31249 432 aaPredicted RBP10.23□□□□□ -0.77
UBE4B-206ENST00000466379 S100A12P80511 92 aa10.23□□□□□ -0.77
UBE4B-206ENST00000466379 LINC01559Q495D7 138 aa10.23□□□□□ -0.77
UBE4B-206ENST00000466379 OR10J6PQ8NGY7 276 aa10.23□□□□□ -0.77
UBE4B-206ENST00000466379 PRO1933Q9H354 126 aa10.23□□□□□ -0.77
UBE4B-206ENST00000466379 OVOL1O14753 267 aa10.23□□□□□ -0.77
UBE4B-206ENST00000466379 ESM1Q9NQ30 184 aa10.23□□□□□ -0.77
UBE4B-206ENST00000466379 GCN1Q92616 2671 aaKnown RBP10.23□□□□□ -0.77
UBE4B-206ENST00000466379 CTRLP40313 264 aa10.22□□□□□ -0.77
UBE4B-206ENST00000466379 TWIST1Q15672 202 aa10.22□□□□□ -0.77
UBE4B-206ENST00000466379 NIT1Q86X76 327 aa10.22□□□□□ -0.77
UBE4B-206ENST00000466379 RNF152Q8N8N0 203 aa10.22□□□□□ -0.77
UBE4B-206ENST00000466379 GATD1Q8NB37 220 aa10.22□□□□□ -0.77
UBE4B-206ENST00000466379 DUX3Q96PT4 197 aa10.22□□□□□ -0.77
UBE4B-206ENST00000466379 FOXC2Q99958 501 aa10.22□□□□□ -0.77
UBE4B-206ENST00000466379 MSRB1Q9NZV6 116 aa10.22□□□□□ -0.77
UBE4B-206ENST00000466379 UNC79Q9P2D8 2635 aa10.22□□□□□ -0.77
UBE4B-206ENST00000466379 ANK3Q12955 4377 aaKnown RBP10.22□□□□□ -0.77
UBE4B-206ENST00000466379 SLURP1P55000 103 aa10.22□□□□□ -0.77
UBE4B-206ENST00000466379 SRSF2Q01130 221 aaKnown RBP10.22□□□□□ -0.77
UBE4B-206ENST00000466379 KHDC1LQ5JSQ8 128 aa10.22□□□□□ -0.77
UBE4B-206ENST00000466379 DNLZQ5SXM8 178 aa10.22□□□□□ -0.77
UBE4B-206ENST00000466379 Q6ZSV7 163 aa10.22□□□□□ -0.77
UBE4B-206ENST00000466379 AMN1Q8IY45 258 aa10.22□□□□□ -0.77
UBE4B-206ENST00000466379 DCANP1Q8TF63 244 aa10.22□□□□□ -0.77
UBE4B-206ENST00000466379 NAGKQ9UJ70 344 aa10.22□□□□□ -0.77
UBE4B-206ENST00000466379 ACANP16112 2415 aa10.22□□□□□ -0.77
UBE4B-206ENST00000466379 A0A1B0GW15 77 aa10.21□□□□□ -0.77
UBE4B-206ENST00000466379 HSBP1O75506 76 aa10.21□□□□□ -0.77
UBE4B-206ENST00000466379 KRTDAPP60985 99 aa10.21□□□□□ -0.77
UBE4B-206ENST00000466379 KIR3DS1Q14943 382 aa10.21□□□□□ -0.77
UBE4B-206ENST00000466379 PMCHL1Q16048 86 aa10.21□□□□□ -0.77
UBE4B-206ENST00000466379 TCTEX1D4Q5JR98 221 aa10.21□□□□□ -0.77
UBE4B-206ENST00000466379 OR8A1Q8NGG7 326 aa10.21□□□□□ -0.77
UBE4B-206ENST00000466379 MS4A6AQ9H2W1 248 aa10.21□□□□□ -0.77
UBE4B-206ENST00000466379 CSN3P07498 182 aa10.21□□□□□ -0.78
UBE4B-206ENST00000466379 ZFAND2AQ8N6M9 145 aa10.21□□□□□ -0.78
UBE4B-206ENST00000466379 WFDC12Q8WWY7 111 aa10.21□□□□□ -0.78
UBE4B-206ENST00000466379 LINC00477Q96M19 166 aa10.21□□□□□ -0.78
UBE4B-206ENST00000466379 CD5LO43866 347 aa10.2□□□□□ -0.78
UBE4B-206ENST00000466379 ZNF493Q6ZR52 646 aa10.2□□□□□ -0.78
UBE4B-206ENST00000466379 REC114Q7Z4M0 266 aa10.2□□□□□ -0.78
UBE4B-206ENST00000466379 ZNF688P0C7X2 276 aa10.19□□□□□ -0.78
UBE4B-206ENST00000466379 TMEM86BQ8N661 226 aa10.19□□□□□ -0.78
UBE4B-206ENST00000466379 MYO9AB2RTY4 2548 aa10.19□□□□□ -0.78
UBE4B-206ENST00000466379 C2orf70A6NJV1 201 aa10.19□□□□□ -0.78
UBE4B-206ENST00000466379 D6R8Y8 96 aa10.19□□□□□ -0.78
UBE4B-206ENST00000466379 M0R2Z0 102 aa10.19□□□□□ -0.78
UBE4B-206ENST00000466379 ZNF664Q8N3J9 261 aa10.19□□□□□ -0.78
UBE4B-206ENST00000466379 TEX29Q8N6K0 151 aa10.19□□□□□ -0.78
UBE4B-206ENST00000466379 SMKR1H3BMG3 65 aa10.18□□□□□ -0.78
UBE4B-206ENST00000466379 LGALS9O00182 355 aa10.18□□□□□ -0.78
UBE4B-206ENST00000466379 RNASE4P34096 147 aaKnown RBP10.18□□□□□ -0.78
UBE4B-206ENST00000466379 ID1P41134 155 aa10.18□□□□□ -0.78
UBE4B-206ENST00000466379 FAM104BQ5XKR9 115 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms