RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 PF4V1P10720 104 aa12.59□□□□□ -0.39
SLX4-202ENST00000466154 ARL3P36405 182 aa12.59□□□□□ -0.39
SLX4-202ENST00000466154 FOXE3Q13461 319 aa12.59□□□□□ -0.39
SLX4-202ENST00000466154 PET117Q6UWS5 81 aa12.59□□□□□ -0.39
SLX4-202ENST00000466154 H3BUX3 64 aa12.59□□□□□ -0.39
SLX4-202ENST00000466154 PAX8Q06710 450 aa12.59□□□□□ -0.39
SLX4-202ENST00000466154 ZNF738Q8NE65 137 aa12.59□□□□□ -0.39
SLX4-202ENST00000466154 RBX1P62877 108 aa12.58□□□□□ -0.39
SLX4-202ENST00000466154 CLEC2AQ6UVW9 174 aa12.58□□□□□ -0.39
SLX4-202ENST00000466154 UNQ9165/PRO28630Q6UXU0 137 aa12.58□□□□□ -0.39
SLX4-202ENST00000466154 MOB4Q9Y3A3 225 aa12.58□□□□□ -0.39
SLX4-202ENST00000466154 TRAV26-2A0A0B4J265 109 aa12.58□□□□□ -0.4
SLX4-202ENST00000466154 CCL25O15444 150 aa12.58□□□□□ -0.4
SLX4-202ENST00000466154 ST20Q9HBF5 79 aa12.58□□□□□ -0.4
SLX4-202ENST00000466154 MRPS16Q9Y3D3 137 aaKnown RBP12.58□□□□□ -0.4
SLX4-202ENST00000466154 CRXO43186 299 aaPredicted RBP12.58□□□□□ -0.4
SLX4-202ENST00000466154 IGF1P05019 195 aa12.58□□□□□ -0.4
SLX4-202ENST00000466154 MRPL52Q86TS9 123 aaKnown RBP12.58□□□□□ -0.4
SLX4-202ENST00000466154 WFDC12Q8WWY7 111 aa12.58□□□□□ -0.4
SLX4-202ENST00000466154 PIMREGQ9BSJ6 248 aa12.58□□□□□ -0.4
SLX4-202ENST00000466154 BLCAPP62952 87 aa12.57□□□□□ -0.4
SLX4-202ENST00000466154 IGHV1-69DA0A0B4J2H0 117 aa12.57□□□□□ -0.4
SLX4-202ENST00000466154 IGHV1-69P01742 117 aa12.57□□□□□ -0.4
SLX4-202ENST00000466154 C11orf21Q9P2W6 132 aa12.57□□□□□ -0.4
SLX4-202ENST00000466154 RPS20P60866 119 aaKnown RBP12.56□□□□□ -0.4
SLX4-202ENST00000466154 ZNF493Q6ZR52 646 aa12.56□□□□□ -0.4
SLX4-202ENST00000466154 Q6ZS46 218 aa12.56□□□□□ -0.4
SLX4-202ENST00000466154 KLK15Q9H2R5 256 aa12.56□□□□□ -0.4
SLX4-202ENST00000466154 HIF1ANQ9NWT6 349 aa12.56□□□□□ -0.4
SLX4-202ENST00000466154 A0A096LNJ9 63 aa12.56□□□□□ -0.4
SLX4-202ENST00000466154 TRBV7-1A0A0A6YYK4 115 aa12.56□□□□□ -0.4
SLX4-202ENST00000466154 MAPK1IP1LQ8NDC0 245 aa12.56□□□□□ -0.4
SLX4-202ENST00000466154 IGHV4-30-2A0A087WSY4 118 aa12.56□□□□□ -0.4
SLX4-202ENST00000466154 VAMP3Q15836 100 aa12.56□□□□□ -0.4
SLX4-202ENST00000466154 SPANXN1Q5VSR9 72 aa12.56□□□□□ -0.4
SLX4-202ENST00000466154 OR4C5Q8NGB2 326 aa12.56□□□□□ -0.4
SLX4-202ENST00000466154 ZANQ9Y493 2812 aa12.56□□□□□ -0.4
SLX4-202ENST00000466154 TRAV8-2A0A0B4J237 113 aa12.55□□□□□ -0.4
SLX4-202ENST00000466154 SMAD7O15105 426 aaKnown RBP12.55□□□□□ -0.4
SLX4-202ENST00000466154 Q5PR19 223 aa12.55□□□□□ -0.4
SLX4-202ENST00000466154 SLC50A1Q9BRV3 221 aa12.55□□□□□ -0.4
SLX4-202ENST00000466154 PRORYQ9H606 182 aa12.55□□□□□ -0.4
SLX4-202ENST00000466154 IGSF10Q6WRI0 2623 aa12.55□□□□□ -0.4
SLX4-202ENST00000466154 IGKV3D-20A0A0C4DH25 116 aa12.55□□□□□ -0.4
SLX4-202ENST00000466154 HBDP02042 147 aa12.55□□□□□ -0.4
SLX4-202ENST00000466154 NMUP48645 174 aa12.55□□□□□ -0.4
SLX4-202ENST00000466154 F6UB75 175 aa12.54□□□□□ -0.4
SLX4-202ENST00000466154 H3BVH4 76 aa12.54□□□□□ -0.4
SLX4-202ENST00000466154 RAB9AP51151 201 aa12.54□□□□□ -0.4
SLX4-202ENST00000466154 TMEM95Q3KNT9 176 aa12.54□□□□□ -0.4
SLX4-202ENST00000466154 IGLC6P0CF74 106 aa12.54□□□□□ -0.4
SLX4-202ENST00000466154 LEPP41159 167 aa12.54□□□□□ -0.4
SLX4-202ENST00000466154 LINC01545Q5VT33 79 aa12.54□□□□□ -0.4
SLX4-202ENST00000466154 DEFB104AQ8WTQ1 72 aa12.54□□□□□ -0.4
SLX4-202ENST00000466154 MAP1LC3AQ9H492 121 aa12.54□□□□□ -0.4
SLX4-202ENST00000466154 SCRT2Q9NQ03 307 aa12.54□□□□□ -0.4
SLX4-202ENST00000466154 LRRK2Q5S007 2527 aa12.53□□□□□ -0.4
SLX4-202ENST00000466154 PRSS1P07477 247 aa12.53□□□□□ -0.4
SLX4-202ENST00000466154 IFI27L1Q96BM0 104 aa12.53□□□□□ -0.4
SLX4-202ENST00000466154 M0R381 172 aa12.53□□□□□ -0.4
SLX4-202ENST00000466154 PIFOQ8TCI5 191 aa12.53□□□□□ -0.4
SLX4-202ENST00000466154 TNFRSF6BO95407 300 aa12.52□□□□□ -0.4
SLX4-202ENST00000466154 GAGE1Q13065 139 aa12.52□□□□□ -0.4
SLX4-202ENST00000466154 C20orf173Q96LM9 149 aa12.52□□□□□ -0.4
SLX4-202ENST00000466154 DKK2Q9UBU2 259 aa12.52□□□□□ -0.4
SLX4-202ENST00000466154 SORL1Q92673 2214 aa12.52□□□□□ -0.4
SLX4-202ENST00000466154 S100A4P26447 101 aaKnown RBP12.52□□□□□ -0.41
SLX4-202ENST00000466154 HIST1H1AQ02539 215 aaPredicted RBP12.52□□□□□ -0.41
SLX4-202ENST00000466154 ZNF575Q86XF7 245 aa12.52□□□□□ -0.41
SLX4-202ENST00000466154 SMIM15Q7Z3B0 74 aa12.52□□□□□ -0.41
SLX4-202ENST00000466154 RNF185Q96GF1 192 aa12.52□□□□□ -0.41
SLX4-202ENST00000466154 COX11Q9Y6N1 276 aa12.51□□□□□ -0.41
SLX4-202ENST00000466154 CUBNO60494 3623 aa12.51□□□□□ -0.41
SLX4-202ENST00000466154 PRR9Q5T870 116 aa12.51□□□□□ -0.41
SLX4-202ENST00000466154 FBLL1A6NHQ2 334 aaKnown RBP12.5□□□□□ -0.41
SLX4-202ENST00000466154 KIR3DS1Q14943 382 aa12.5□□□□□ -0.41
SLX4-202ENST00000466154 TM4SF20Q53R12 229 aa12.5□□□□□ -0.41
SLX4-202ENST00000466154 DOPEY1Q5JWR5 2465 aa12.5□□□□□ -0.41
SLX4-202ENST00000466154 EDN2P20800 178 aa12.5□□□□□ -0.41
SLX4-202ENST00000466154 OR4X2Q8NGF9 303 aa12.5□□□□□ -0.41
SLX4-202ENST00000466154 GATD1Q8NB37 220 aa12.5□□□□□ -0.41
SLX4-202ENST00000466154 ABCA12Q86UK0 2595 aa12.49□□□□□ -0.41
SLX4-202ENST00000466154 PRSS47A8MTI9 375 aa12.49□□□□□ -0.41
SLX4-202ENST00000466154 BVES-AS1Q5T3Y7 98 aa12.49□□□□□ -0.41
SLX4-202ENST00000466154 U3KQK5 164 aa12.49□□□□□ -0.41
SLX4-202ENST00000466154 RIPPLY3P57055 190 aa12.49□□□□□ -0.41
SLX4-202ENST00000466154 LINC01559Q495D7 138 aa12.49□□□□□ -0.41
SLX4-202ENST00000466154 NAA38Q9BRA0 125 aaKnown RBP12.49□□□□□ -0.41
SLX4-202ENST00000466154 C7orf71A4D174 169 aa12.49□□□□□ -0.41
SLX4-202ENST00000466154 RNASE4P34096 147 aaKnown RBP12.49□□□□□ -0.41
SLX4-202ENST00000466154 C10orf105Q8TEF2 133 aa12.49□□□□□ -0.41
SLX4-202ENST00000466154 TMEM190Q8WZ59 177 aa12.49□□□□□ -0.41
SLX4-202ENST00000466154 TMEM158Q8WZ71 300 aa12.49□□□□□ -0.41
SLX4-202ENST00000466154 TLN2Q9Y4G6 2542 aa12.49□□□□□ -0.41
SLX4-202ENST00000466154 OR10J6PQ8NGY7 276 aa12.48□□□□□ -0.41
SLX4-202ENST00000466154 TTTY13Q9BZ97 58 aa12.48□□□□□ -0.41
SLX4-202ENST00000466154 ZNF462Q96JM2 2506 aa12.48□□□□□ -0.41
SLX4-202ENST00000466154 AVPP01185 164 aa12.48□□□□□ -0.41
SLX4-202ENST00000466154 IGKV3-20P01619 116 aa12.48□□□□□ -0.41
SLX4-202ENST00000466154 MS4A6AQ9H2W1 248 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms