RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 SCN2AQ99250 2005 aa7.34□□□□□ -1.24
SCAF11-205ENST00000465950 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.33□□□□□ -1.24
SCAF11-205ENST00000465950 ARMS2P0C7Q2 107 aa7.33□□□□□ -1.24
SCAF11-205ENST00000465950 TMEM88Q6PEY1 159 aa7.33□□□□□ -1.24
SCAF11-205ENST00000465950 OR11H7Q8NGC8 314 aa7.33□□□□□ -1.24
SCAF11-205ENST00000465950 PARLQ9H300 379 aa7.33□□□□□ -1.24
SCAF11-205ENST00000465950 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.33□□□□□ -1.241e-38■■■■■ 50.6
SCAF11-205ENST00000465950 EBI3Q14213 229 aa7.33□□□□□ -1.24
SCAF11-205ENST00000465950 KLK9Q9UKQ9 250 aa7.33□□□□□ -1.24
SCAF11-205ENST00000465950 ADAMTS9Q9P2N4 1935 aa7.33□□□□□ -1.24
SCAF11-205ENST00000465950 FAM231BA6NCW3 169 aa7.33□□□□□ -1.24
SCAF11-205ENST00000465950 INS-IGF2F8WCM5 200 aa7.33□□□□□ -1.24
SCAF11-205ENST00000465950 LEPROTO15243 131 aa7.33□□□□□ -1.24
SCAF11-205ENST00000465950 HERVK_113P63121 156 aa7.33□□□□□ -1.24
SCAF11-205ENST00000465950 HIST1H4GQ99525 98 aa7.33□□□□□ -1.24
SCAF11-205ENST00000465950 B9D2Q9BPU9 175 aa7.33□□□□□ -1.24
SCAF11-205ENST00000465950 SLC25A2Q9BXI2 301 aa7.33□□□□□ -1.24
SCAF11-205ENST00000465950 ZNF702PQ9H963 129 aa7.33□□□□□ -1.24
SCAF11-205ENST00000465950 ELF5Q9UKW6 265 aaPredicted RBP7.33□□□□□ -1.24
SCAF11-205ENST00000465950 DOCK9Q9BZ29 2069 aa7.33□□□□□ -1.24
SCAF11-205ENST00000465950 IGLC1P0CG04 106 aa7.33□□□□□ -1.24
SCAF11-205ENST00000465950 HLA-DRB4P13762 266 aa7.33□□□□□ -1.24
SCAF11-205ENST00000465950 SMIM2Q9BVW6 85 aa7.33□□□□□ -1.24
SCAF11-205ENST00000465950 HLA-DRB4X5D2U9 266 aa7.33□□□□□ -1.24
SCAF11-205ENST00000465950 NOTCH4Q99466 2003 aa7.32□□□□□ -1.24
SCAF11-205ENST00000465950 TRBV10-1A0A0K0K1A3 114 aa7.32□□□□□ -1.24
SCAF11-205ENST00000465950 PRSS29PA6NIE9 313 aa7.32□□□□□ -1.24
SCAF11-205ENST00000465950 NDUFA1O15239 70 aa7.32□□□□□ -1.24
SCAF11-205ENST00000465950 LHFPL1Q86WI0 220 aa7.32□□□□□ -1.24
SCAF11-205ENST00000465950 APRG1Q8IVJ8 170 aa7.32□□□□□ -1.24
SCAF11-205ENST00000465950 GFRA4Q9GZZ7 299 aa7.32□□□□□ -1.24
SCAF11-205ENST00000465950 TP53TG1Q9Y2A0 90 aa7.32□□□□□ -1.24
SCAF11-205ENST00000465950 BUB3O43684 328 aa7.32□□□□□ -1.24
SCAF11-205ENST00000465950 Q8N976 141 aa7.32□□□□□ -1.24
SCAF11-205ENST00000465950 OBSL1O75147 1896 aa7.32□□□□□ -1.24
SCAF11-205ENST00000465950 TRAV13-1A0A0B4J241 112 aa7.32□□□□□ -1.24
SCAF11-205ENST00000465950 H3BQ85 93 aa7.32□□□□□ -1.24
SCAF11-205ENST00000465950 SIVA1O15304 175 aa7.32□□□□□ -1.24
SCAF11-205ENST00000465950 IGLV3-1P01715 115 aa7.32□□□□□ -1.24
SCAF11-205ENST00000465950 TMEM61Q8N0U2 210 aa7.32□□□□□ -1.24
SCAF11-205ENST00000465950 GTF3C1Q12789 2109 aa7.32□□□□□ -1.24
SCAF11-205ENST00000465950 SLC7A5P1Q8MH63 180 aa7.32□□□□□ -1.24
SCAF11-205ENST00000465950 MAP6D1Q9H9H5 199 aa7.32□□□□□ -1.24
SCAF11-205ENST00000465950 LSM4Q9Y4Z0 139 aaKnown RBP7.32□□□□□ -1.24
SCAF11-205ENST00000465950 C10orf142B7Z368 130 aa7.31□□□□□ -1.24
SCAF11-205ENST00000465950 GTF2H5Q6ZYL4 71 aa7.31□□□□□ -1.24
SCAF11-205ENST00000465950 TRAV4A0A0B4J268 109 aa7.31□□□□□ -1.24
SCAF11-205ENST00000465950 HBDP02042 147 aa7.31□□□□□ -1.24
SCAF11-205ENST00000465950 ZFP2Q6ZN57 461 aa7.31□□□□□ -1.24
SCAF11-205ENST00000465950 IGKV1-5P01602 117 aa7.31□□□□□ -1.24
SCAF11-205ENST00000465950 C1orf134Q5TEV5 83 aa7.31□□□□□ -1.24
SCAF11-205ENST00000465950 GSN-AS1Q9NRJ2 163 aa7.31□□□□□ -1.24
SCAF11-205ENST00000465950 ZNF492Q9P255 531 aa7.31□□□□□ -1.24
SCAF11-205ENST00000465950 CRYGDP07320 174 aa7.31□□□□□ -1.24
SCAF11-205ENST00000465950 LGALS9BQ3B8N2 356 aa7.31□□□□□ -1.24
SCAF11-205ENST00000465950 SPG11Q96JI7 2443 aa7.3□□□□□ -1.24
SCAF11-205ENST00000465950 ETDCA0A1B0GVM5 59 aa7.3□□□□□ -1.24
SCAF11-205ENST00000465950 K7EMI3 77 aa7.3□□□□□ -1.24
SCAF11-205ENST00000465950 IGLV2-23P01705 113 aa7.3□□□□□ -1.24
SCAF11-205ENST00000465950 NIT2Q9NQR4 276 aa7.3□□□□□ -1.24
SCAF11-205ENST00000465950 GNG5P63218 68 aa7.3□□□□□ -1.24
SCAF11-205ENST00000465950 LINC00518Q8N0U6 118 aa7.3□□□□□ -1.24
SCAF11-205ENST00000465950 EXOC3-AS1Q8N2X6 119 aa7.3□□□□□ -1.24
SCAF11-205ENST00000465950 Q6ZSR3 168 aa7.3□□□□□ -1.24
SCAF11-205ENST00000465950 NCOR2Q9Y618 2525 aa7.3□□□□□ -1.24
SCAF11-205ENST00000465950 K7EP13 123 aa7.3□□□□□ -1.24
SCAF11-205ENST00000465950 KRTAP10-9P60411 292 aa7.3□□□□□ -1.24
SCAF11-205ENST00000465950 C14orf178Q8N769 122 aaPredicted RBP7.3□□□□□ -1.24
SCAF11-205ENST00000465950 ZNF706Q9Y5V0 76 aaPredicted RBP7.3□□□□□ -1.24
SCAF11-205ENST00000465950 COX7A2LO14548 114 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 SCGB1A1P11684 91 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 SDHCQ99643 169 aaPredicted RBP7.29□□□□□ -1.24
SCAF11-205ENST00000465950 CHAC1Q9BUX1 264 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 ZNF407Q9C0G0 2248 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 hDV102S1A0JD36 115 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 QRFPP83859 136 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 PRIMA1Q86XR5 153 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 LINC00574Q9H8X3 128 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 DOCK7Q96N67 2140 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 IGLC7A0M8Q6 106 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 HIGD1CA8MV81 97 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 RPL18AQ02543 176 aaKnown RBP7.29□□□□□ -1.24
SCAF11-205ENST00000465950 TAL2Q16559 108 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 MGST2Q99735 147 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 SNHG12Q9BXW3 62 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 CADP27708 2225 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 MED14OSP0DP75 135 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 MBD3L1Q8WWY6 194 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 HSPB9Q9BQS6 159 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 TRAV1-1A0A0B4J248 108 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 IGHV3-30P01768 117 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 IGHV3-33P01772 117 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 TYMSP04818 313 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 IGHV3-30-3P0DP02 117 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 IGHV3-30-5P0DP03 117 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 ANXA2RQ3ZCQ2 193 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 Q86TA4 180 aa7.29□□□□□ -1.24
SCAF11-205ENST00000465950 SCO2A0A1W2PP80 73 aa7.28□□□□□ -1.24
SCAF11-205ENST00000465950 CT83Q5H943 113 aa7.28□□□□□ -1.24
SCAF11-205ENST00000465950 ARTNQ5T4W7 220 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms