RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 ARL6Q9H0F7 186 aa5.94□□□□□ -1.46
APP-213ENST00000464867 KIF25-AS1Q9Y6Z4 181 aa5.94□□□□□ -1.46
APP-213ENST00000464867 SMCO3A2RU48 225 aa5.93□□□□□ -1.46
APP-213ENST00000464867 H3BTX0 84 aa5.93□□□□□ -1.46
APP-213ENST00000464867 SLC17A3O00476 420 aa5.93□□□□□ -1.46
APP-213ENST00000464867 PHOX2AO14813 284 aa5.93□□□□□ -1.46
APP-213ENST00000464867 GATA1P15976 413 aaPredicted RBP5.93□□□□□ -1.46
APP-213ENST00000464867 PLP1P60201 277 aa5.93□□□□□ -1.46
APP-213ENST00000464867 ERCC8Q13216 396 aa5.93□□□□□ -1.46
APP-213ENST00000464867 RHOHQ15669 191 aa5.93□□□□□ -1.46
APP-213ENST00000464867 SCGB2B2Q4G0G5 96 aa5.93□□□□□ -1.46
APP-213ENST00000464867 SPINK6Q6UWN8 80 aa5.93□□□□□ -1.46
APP-213ENST00000464867 SAMD12Q8N8I0 201 aa5.93□□□□□ -1.46
APP-213ENST00000464867 TERB2Q8NHR7 220 aa5.93□□□□□ -1.46
APP-213ENST00000464867 RNF185Q96GF1 192 aa5.93□□□□□ -1.46
APP-213ENST00000464867 ARV1Q9H2C2 271 aa5.93□□□□□ -1.46
APP-213ENST00000464867 NAA60Q9H7X0 242 aa5.93□□□□□ -1.46
APP-213ENST00000464867 FBLL1A6NHQ2 334 aaKnown RBP5.92□□□□□ -1.46
APP-213ENST00000464867 MRPS12O15235 138 aaKnown RBP5.92□□□□□ -1.46
APP-213ENST00000464867 CRISP2P16562 243 aa5.92□□□□□ -1.46
APP-213ENST00000464867 RPL19P84098 196 aaKnown RBP5.92□□□□□ -1.46
APP-213ENST00000464867 ELOBQ15370 118 aa5.92□□□□□ -1.46
APP-213ENST00000464867 GUK1Q16774 197 aa5.92□□□□□ -1.46
APP-213ENST00000464867 KCNIP4Q6PIL6 250 aa5.92□□□□□ -1.46
APP-213ENST00000464867 SDIM1Q6ZPB5 146 aa5.92□□□□□ -1.46
APP-213ENST00000464867 LINC00305Q7Z4B0 112 aa5.92□□□□□ -1.46
APP-213ENST00000464867 CROCCP3Q8IVE0 287 aa5.92□□□□□ -1.46
APP-213ENST00000464867 SLC25A29Q8N8R3 303 aa5.92□□□□□ -1.46
APP-213ENST00000464867 OR10G9Q8NGN4 311 aa5.92□□□□□ -1.46
APP-213ENST00000464867 MARCH1Q8TCQ1 289 aa5.92□□□□□ -1.46
APP-213ENST00000464867 UBE2WQ96B02 151 aa5.92□□□□□ -1.46
APP-213ENST00000464867 YIPF6Q96EC8 236 aa5.92□□□□□ -1.46
APP-213ENST00000464867 VAX2Q9UIW0 290 aa5.92□□□□□ -1.46
APP-213ENST00000464867 KLK12Q9UKR0 248 aa5.92□□□□□ -1.46
APP-213ENST00000464867 KCNIP3Q9Y2W7 256 aa5.92□□□□□ -1.46
APP-213ENST00000464867 TRGV11A0A075B6L2 103 aa5.91□□□□□ -1.46
APP-213ENST00000464867 A0A087WWC5 75 aa5.91□□□□□ -1.46
APP-213ENST00000464867 A0A087WYN8 130 aa5.91□□□□□ -1.46
APP-213ENST00000464867 TRBV6-4A0A1B0GX49 114 aa5.91□□□□□ -1.46
APP-213ENST00000464867 M0R2P5 195 aa5.91□□□□□ -1.46
APP-213ENST00000464867 MED6O75586 246 aa5.91□□□□□ -1.46
APP-213ENST00000464867 IAPPP10997 89 aa5.91□□□□□ -1.46
APP-213ENST00000464867 POLR2GP62487 172 aaKnown RBP eCLIP5.91□□□□□ -1.46
APP-213ENST00000464867 Q0VG73 95 aa5.91□□□□□ -1.46
APP-213ENST00000464867 TMEM78Q5T7P6 136 aa5.91□□□□□ -1.46
APP-213ENST00000464867 PXDC1Q5TGL8 231 aa5.91□□□□□ -1.46
APP-213ENST00000464867 SNX29P2Q8IUI4 249 aa5.91□□□□□ -1.46
APP-213ENST00000464867 OR51S1Q8NGJ8 323 aa5.91□□□□□ -1.46
APP-213ENST00000464867 OR52I2Q8NH67 350 aa5.91□□□□□ -1.46
APP-213ENST00000464867 GTSF1Q8WW33 167 aa5.91□□□□□ -1.46
APP-213ENST00000464867 FAM19A4Q96LR4 140 aa5.91□□□□□ -1.46
APP-213ENST00000464867 CIB3Q96Q77 187 aaPredicted RBP5.91□□□□□ -1.46
APP-213ENST00000464867 BLOC1S6Q9UL45 172 aa5.91□□□□□ -1.46
APP-213ENST00000464867 LOC100506127A0A0U1RQW1 187 aa5.9□□□□□ -1.46
APP-213ENST00000464867 FAM231BA6NCW3 169 aa5.9□□□□□ -1.46
APP-213ENST00000464867 USP17L23D6RBM5 183 aa5.9□□□□□ -1.46
APP-213ENST00000464867 ANKRD65E5RJM6 399 aa5.9□□□□□ -1.46
APP-213ENST00000464867 CIDEAO60543 219 aa5.9□□□□□ -1.46
APP-213ENST00000464867 HIST1H1EP10412 219 aaKnown RBP5.9□□□□□ -1.46
APP-213ENST00000464867 TBPP20226 339 aa5.9□□□□□ -1.46
APP-213ENST00000464867 BAK1Q16611 211 aa5.9□□□□□ -1.46
APP-213ENST00000464867 TMEM183BQ1AE95 376 aa5.9□□□□□ -1.46
APP-213ENST00000464867 MUC21Q5SSG8 566 aa5.9□□□□□ -1.46
APP-213ENST00000464867 FAM159AQ6UWV7 190 aa5.9□□□□□ -1.46
APP-213ENST00000464867 Q6ZQT7 251 aa5.9□□□□□ -1.46
APP-213ENST00000464867 TMEM183AQ8IXX5 376 aa5.9□□□□□ -1.46
APP-213ENST00000464867 MRPL53Q96EL3 112 aaKnown RBP5.9□□□□□ -1.46
APP-213ENST00000464867 AGPAT4-IT1Q9H0P7 198 aa5.9□□□□□ -1.46
APP-213ENST00000464867 SLC39A9Q9NUM3 307 aa5.9□□□□□ -1.46
APP-213ENST00000464867 A0A087WX48 190 aa5.89□□□□□ -1.47
APP-213ENST00000464867 TRAV26-2A0A0B4J265 109 aa5.89□□□□□ -1.47
APP-213ENST00000464867 A0A0B4J2A0 478 aa5.89□□□□□ -1.47
APP-213ENST00000464867 PIGBOS1A0A0B4J2F0 54 aa5.89□□□□□ -1.47
APP-213ENST00000464867 PGPA6NDG6 321 aa5.89□□□□□ -1.47
APP-213ENST00000464867 IGLC2P0DOY2 106 aa5.89□□□□□ -1.47
APP-213ENST00000464867 PRR3P79522 188 aaKnown RBP5.89□□□□□ -1.47
APP-213ENST00000464867 CIRBPQ14011 172 aaKnown RBP5.89□□□□□ -1.47
APP-213ENST00000464867 PRR4Q16378 134 aa5.89□□□□□ -1.47
APP-213ENST00000464867 PATE2Q6UY27 113 aa5.89□□□□□ -1.47
APP-213ENST00000464867 NIT1Q86X76 327 aa5.89□□□□□ -1.47
APP-213ENST00000464867 SAT2Q96F10 170 aaPredicted RBP5.89□□□□□ -1.47
APP-213ENST00000464867 DNAJC30Q96LL9 226 aa5.89□□□□□ -1.47
APP-213ENST00000464867 SHPKQ9UHJ6 478 aa5.89□□□□□ -1.47
APP-213ENST00000464867 PRELID1Q9Y255 219 aa5.89□□□□□ -1.47
APP-213ENST00000464867 C5orf51A6NDU8 294 aa5.88□□□□□ -1.47
APP-213ENST00000464867 H3BQ15 152 aa5.88□□□□□ -1.47
APP-213ENST00000464867 H7C1H1 209 aa5.88□□□□□ -1.47
APP-213ENST00000464867 GOSR2O14653 212 aa5.88□□□□□ -1.47
APP-213ENST00000464867 COX7A2P2O60397 106 aa5.88□□□□□ -1.47
APP-213ENST00000464867 ZNF253O75346 499 aa5.88□□□□□ -1.47
APP-213ENST00000464867 CD3DP04234 171 aa5.88□□□□□ -1.47
APP-213ENST00000464867 PRSS1P07477 247 aa5.88□□□□□ -1.47
APP-213ENST00000464867 UBE2MP61081 183 aaKnown RBP5.88□□□□□ -1.47
APP-213ENST00000464867 SPANXN5Q5MJ07 72 aa5.88□□□□□ -1.47
APP-213ENST00000464867 ATRAIDQ6UW56 229 aa5.88□□□□□ -1.47
APP-213ENST00000464867 ZFAND2AQ8N6M9 145 aa5.88□□□□□ -1.47
APP-213ENST00000464867 RTBDNQ9BSG5 229 aaPredicted RBP5.88□□□□□ -1.47
APP-213ENST00000464867 IGHV3-64A0A075B6Q5 118 aa5.87□□□□□ -1.47
APP-213ENST00000464867 PRSS46E5RG02 174 aa5.87□□□□□ -1.47
APP-213ENST00000464867 F5H697 171 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms