RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 LY6G6CO95867 125 aa0.27□□□□□ -2.37
USP9X-204ENST00000463829 EVI2AP22794 236 aa0.27□□□□□ -2.37
USP9X-204ENST00000463829 DNAJB13P59910 316 aa0.27□□□□□ -2.37
USP9X-204ENST00000463829 CCSMST1Q4G0I0 132 aa0.27□□□□□ -2.37
USP9X-204ENST00000463829 CSAG1Q6PB30 78 aa0.27□□□□□ -2.37
USP9X-204ENST00000463829 PCBD2Q9H0N5 130 aa0.27□□□□□ -2.37
USP9X-204ENST00000463829 ATPIF1Q9UII2 106 aa0.27□□□□□ -2.37
USP9X-204ENST00000463829 MPC1Q9Y5U8 109 aa0.27□□□□□ -2.37
USP9X-204ENST00000463829 MACF1Q9UPN3 7388 aaKnown RBP0.27□□□□□ -2.37
USP9X-204ENST00000463829 FGD6Q6ZV73 1430 aa0.27□□□□□ -2.37
USP9X-204ENST00000463829 TRAV13-1A0A0B4J241 112 aa0.26□□□□□ -2.37
USP9X-204ENST00000463829 LOC107984156A0A0G2JMH3 177 aa0.26□□□□□ -2.37
USP9X-204ENST00000463829 A0A1W2PRE2 83 aa0.26□□□□□ -2.37
USP9X-204ENST00000463829 E7EQ34 232 aa0.26□□□□□ -2.37
USP9X-204ENST00000463829 FAM107AO95990 144 aa0.26□□□□□ -2.37
USP9X-204ENST00000463829 SRP9P49458 86 aaKnown RBP0.26□□□□□ -2.37
USP9X-204ENST00000463829 ARL17AQ8IVW1 177 aa0.26□□□□□ -2.37
USP9X-204ENST00000463829 MORN4Q8NDC4 146 aa0.26□□□□□ -2.37
USP9X-204ENST00000463829 NABP2Q9BQ15 211 aa0.26□□□□□ -2.37
USP9X-204ENST00000463829 LXNQ9BS40 222 aa0.26□□□□□ -2.37
USP9X-204ENST00000463829 FKBP11Q9NYL4 201 aa0.26□□□□□ -2.37
USP9X-204ENST00000463829 MRPL35Q9NZE8 188 aaKnown RBP0.26□□□□□ -2.37
USP9X-204ENST00000463829 FAM135BQ49AJ0 1406 aa0.25□□□□□ -2.37
USP9X-204ENST00000463829 TRBV7-6A0A0J9YX20 115 aa0.25□□□□□ -2.37
USP9X-204ENST00000463829 TEX29Q8N6K0 151 aa0.25□□□□□ -2.37
USP9X-204ENST00000463829 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.25□□□□□ -2.37
USP9X-204ENST00000463829 C19orf12Q9NSK7 152 aa0.25□□□□□ -2.37
USP9X-204ENST00000463829 MED31Q9Y3C7 131 aa0.25□□□□□ -2.37
USP9X-204ENST00000463829 BDP1A6H8Y1 2624 aa0.25□□□□□ -2.37
USP9X-204ENST00000463829 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.24□□□□□ -2.37
USP9X-204ENST00000463829 RPL37P61927 97 aaKnown RBP0.24□□□□□ -2.37
USP9X-204ENST00000463829 FXYD3Q14802 87 aa0.24□□□□□ -2.37
USP9X-204ENST00000463829 HRCT1Q6UXD1 115 aa0.24□□□□□ -2.37
USP9X-204ENST00000463829 OR8J3Q8NGG0 315 aa0.24□□□□□ -2.37
USP9X-204ENST00000463829 THEM6Q8WUY1 208 aa0.24□□□□□ -2.37
USP9X-204ENST00000463829 FER1L6Q2WGJ9 1857 aa0.24□□□□□ -2.37
USP9X-204ENST00000463829 IFITM5A6NNB3 132 aa0.23□□□□□ -2.37
USP9X-204ENST00000463829 H3BMG7 143 aa0.23□□□□□ -2.37
USP9X-204ENST00000463829 EDF1O60869 148 aaKnown RBP0.23□□□□□ -2.37
USP9X-204ENST00000463829 IGF2P01344 180 aa0.23□□□□□ -2.37
USP9X-204ENST00000463829 SPINK6Q6UWN8 80 aa0.23□□□□□ -2.37
USP9X-204ENST00000463829 DEFB132Q7Z7B7 95 aa0.23□□□□□ -2.37
USP9X-204ENST00000463829 OR51A4Q8NGJ6 313 aa0.23□□□□□ -2.37
USP9X-204ENST00000463829 LINC00208Q96KT6 92 aa0.23□□□□□ -2.37
USP9X-204ENST00000463829 MAST4O15021 2626 aa0.23□□□□□ -2.37
USP9X-204ENST00000463829 MEGF8Q7Z7M0 2845 aa0.23□□□□□ -2.37
USP9X-204ENST00000463829 SYNE2Q8WXH0 6885 aaKnown RBP0.22□□□□□ -2.37
USP9X-204ENST00000463829 NBDYA0A0U1RRE5 68 aa0.22□□□□□ -2.37
USP9X-204ENST00000463829 ETV6P41212 452 aa0.22□□□□□ -2.37
USP9X-204ENST00000463829 POLR2HP52434 150 aaKnown RBP0.22□□□□□ -2.37
USP9X-204ENST00000463829 GTF2A1P52655 376 aaPredicted RBP0.22□□□□□ -2.37
USP9X-204ENST00000463829 LSM3P62310 102 aaKnown RBP0.22□□□□□ -2.37
USP9X-204ENST00000463829 MRPL36Q9P0J6 103 aaKnown RBP0.22□□□□□ -2.37
USP9X-204ENST00000463829 MYH1P12882 1939 aa0.22□□□□□ -2.37
USP9X-204ENST00000463829 AFDNP55196 1824 aaKnown RBP0.22□□□□□ -2.37
USP9X-204ENST00000463829 LOC101927531A0A1B0GV80 90 aa0.21□□□□□ -2.38
USP9X-204ENST00000463829 TMEM30CPA0ZSE6 113 aa0.21□□□□□ -2.38
USP9X-204ENST00000463829 HIGD1CA8MV81 97 aa0.21□□□□□ -2.38
USP9X-204ENST00000463829 SLC25A4P12235 298 aa0.21□□□□□ -2.38
USP9X-204ENST00000463829 CRYGSP22914 178 aa0.21□□□□□ -2.38
USP9X-204ENST00000463829 ZNF56Q15929 161 aa0.21□□□□□ -2.38
USP9X-204ENST00000463829 C5orf56Q8N8D9 126 aa0.21□□□□□ -2.38
USP9X-204ENST00000463829 SMIM7Q9BQ49 75 aa0.21□□□□□ -2.38
USP9X-204ENST00000463829 A2MP01023 1474 aa0.21□□□□□ -2.38
USP9X-204ENST00000463829 ESPL1Q14674 2120 aa0.2□□□□□ -2.38
USP9X-204ENST00000463829 FAT4Q6V0I7 4981 aa0.2□□□□□ -2.38
USP9X-204ENST00000463829 LOC107984640A0A0U1RRK4 108 aa0.2□□□□□ -2.38
USP9X-204ENST00000463829 TMEM189A5PLL7 270 aa0.2□□□□□ -2.38
USP9X-204ENST00000463829 TPST1O60507 370 aa0.2□□□□□ -2.38
USP9X-204ENST00000463829 BLCAPP62952 87 aa0.2□□□□□ -2.38
USP9X-204ENST00000463829 CBLN4Q9NTU7 201 aa0.2□□□□□ -2.38
USP9X-204ENST00000463829 COMMD3Q9UBI1 195 aa0.2□□□□□ -2.38
USP9X-204ENST00000463829 TRAPPC2LQ9UL33 140 aa0.2□□□□□ -2.38
USP9X-204ENST00000463829 V9GYQ6 96 aa0.2□□□□□ -2.38
USP9X-204ENST00000463829 RBBP6Q7Z6E9 1792 aaKnown RBP0.19□□□□□ -2.38
USP9X-204ENST00000463829 FSIP2Q5CZC0 6907 aa0.19□□□□□ -2.38
USP9X-204ENST00000463829 A0A1B0GV72 72 aa0.19□□□□□ -2.38
USP9X-204ENST00000463829 FXYD1O00168 92 aa0.19□□□□□ -2.38
USP9X-204ENST00000463829 LYPD5Q6UWN5 251 aa0.19□□□□□ -2.38
USP9X-204ENST00000463829 DMAC1Q96GE9 116 aa0.19□□□□□ -2.38
USP9X-204ENST00000463829 CENPHQ9H3R5 247 aa0.19□□□□□ -2.38
USP9X-204ENST00000463829 SPAG17Q6Q759 2223 aa0.19□□□□□ -2.38
USP9X-204ENST00000463829 PTPRZ1P23471 2315 aaPredicted RBP0.19□□□□□ -2.38
USP9X-204ENST00000463829 PBRM1Q86U86 1689 aa0.18□□□□□ -2.38
USP9X-204ENST00000463829 TPRP12270 2363 aaKnown RBP0.18□□□□□ -2.38
USP9X-204ENST00000463829 CDC42EP2O14613 210 aa0.18□□□□□ -2.38
USP9X-204ENST00000463829 HBDP02042 147 aa0.18□□□□□ -2.38
USP9X-204ENST00000463829 NAT14Q8WUY8 206 aa0.18□□□□□ -2.38
USP9X-204ENST00000463829 SMPXQ9UHP9 88 aa0.18□□□□□ -2.38
USP9X-204ENST00000463829 CDK12Q9NYV4 1490 aaPredicted RBP0.17□□□□□ -2.38
USP9X-204ENST00000463829 A0A0G2JMM0 328 aa0.17□□□□□ -2.38
USP9X-204ENST00000463829 M0QZK8 103 aa0.17□□□□□ -2.38
USP9X-204ENST00000463829 PGRMC1O00264 195 aaKnown RBP0.17□□□□□ -2.38
USP9X-204ENST00000463829 IGKCP01834 107 aa0.17□□□□□ -2.38
USP9X-204ENST00000463829 RPL7P18124 248 aaKnown RBP0.17□□□□□ -2.38
USP9X-204ENST00000463829 RHOHQ15669 191 aa0.17□□□□□ -2.38
USP9X-204ENST00000463829 ASB16-AS1Q495Z4 193 aa0.17□□□□□ -2.38
USP9X-204ENST00000463829 TOMM20LQ6UXN7 152 aa0.17□□□□□ -2.38
USP9X-204ENST00000463829 IDO2Q6ZQW0 420 aa0.17□□□□□ -2.38
USP9X-204ENST00000463829 OR5A2Q8NGI9 324 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms