RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 RNF222A6NCQ9 220 aa13.04□□□□□ -0.32
SF3A1-205ENST00000463818 IFNA5P01569 189 aa13.04□□□□□ -0.32
SF3A1-205ENST00000463818 CSN1S1P47710 185 aa13.04□□□□□ -0.32
SF3A1-205ENST00000463818 TCL1AP56279 114 aa13.04□□□□□ -0.32
SF3A1-205ENST00000463818 LYPD1Q8N2G4 141 aa13.04□□□□□ -0.32
SF3A1-205ENST00000463818 OR2T35Q8NGX2 323 aa13.04□□□□□ -0.32
SF3A1-205ENST00000463818 SCGB1C1Q8TD33 95 aa13.04□□□□□ -0.32
SF3A1-205ENST00000463818 SMIM3Q9BZL3 60 aa13.04□□□□□ -0.32
SF3A1-205ENST00000463818 WFDC1Q9HC57 220 aa13.04□□□□□ -0.32
SF3A1-205ENST00000463818 TNFSF18Q9UNG2 199 aa13.04□□□□□ -0.32
SF3A1-205ENST00000463818 PCLOQ9Y6V0 5065 aa13.03□□□□□ -0.32
SF3A1-205ENST00000463818 IBA57Q5T440 356 aaKnown RBP13.03□□□□□ -0.32
SF3A1-205ENST00000463818 Q8TAT8 98 aa13.03□□□□□ -0.32
SF3A1-205ENST00000463818 UPK3BQ9BT76 320 aa13.03□□□□□ -0.32
SF3A1-205ENST00000463818 Q9H3A6 140 aa13.03□□□□□ -0.32
SF3A1-205ENST00000463818 MRPS16Q9Y3D3 137 aaKnown RBP13.03□□□□□ -0.32
SF3A1-205ENST00000463818 A0A096LPF7 62 aa13.02□□□□□ -0.33
SF3A1-205ENST00000463818 TRBV7-9A0A0J9YWB2 115 aa13.02□□□□□ -0.33
SF3A1-205ENST00000463818 UBE2L3P68036 154 aaKnown RBP13.02□□□□□ -0.33
SF3A1-205ENST00000463818 KRTAP1-5Q9BYS1 174 aa13.02□□□□□ -0.33
SF3A1-205ENST00000463818 RBAKDNA6NC62 111 aa13.01□□□□□ -0.33
SF3A1-205ENST00000463818 IGHV3-53P01767 116 aa13.01□□□□□ -0.33
SF3A1-205ENST00000463818 ZNF266Q14584 549 aa13.01□□□□□ -0.33
SF3A1-205ENST00000463818 TTC32Q5I0X7 151 aa13.01□□□□□ -0.33
SF3A1-205ENST00000463818 ARPC5LQ9BPX5 153 aa13.01□□□□□ -0.33
SF3A1-205ENST00000463818 MRPL16Q9NX20 251 aaKnown RBP13.01□□□□□ -0.33
SF3A1-205ENST00000463818 DIRC3C9JPN6 131 aa13□□□□□ -0.33
SF3A1-205ENST00000463818 EIF3GO75821 320 aaKnown RBP eCLIP13□□□□□ -0.33
SF3A1-205ENST00000463818 TAS2R45P59539 299 aa13□□□□□ -0.33
SF3A1-205ENST00000463818 KHDC3LQ587J8 217 aa13□□□□□ -0.33
SF3A1-205ENST00000463818 ST6GAL2Q96JF0 529 aa13□□□□□ -0.33
SF3A1-205ENST00000463818 C16orf90A8MZG2 172 aa12.99□□□□□ -0.33
SF3A1-205ENST00000463818 PAX4O43316 350 aa12.99□□□□□ -0.33
SF3A1-205ENST00000463818 MUC21Q5SSG8 566 aa12.99□□□□□ -0.33
SF3A1-205ENST00000463818 INO80EQ8NBZ0 244 aaPredicted RBP12.99□□□□□ -0.33
SF3A1-205ENST00000463818 OR2G3Q8NGZ4 309 aa12.99□□□□□ -0.33
SF3A1-205ENST00000463818 HYLS1Q96M11 299 aa12.99□□□□□ -0.33
SF3A1-205ENST00000463818 A0A1W2PPQ1 181 aa12.98□□□□□ -0.33
SF3A1-205ENST00000463818 PGPA6NDG6 321 aa12.98□□□□□ -0.33
SF3A1-205ENST00000463818 PSMG3Q9BT73 122 aaPredicted RBP12.98□□□□□ -0.33
SF3A1-205ENST00000463818 ZNF415Q09FC8 603 aa12.97□□□□□ -0.33
SF3A1-205ENST00000463818 SLAQ13239 276 aa12.97□□□□□ -0.33
SF3A1-205ENST00000463818 FHL2Q14192 279 aa12.97□□□□□ -0.33
SF3A1-205ENST00000463818 Q6ZNX1 250 aa12.97□□□□□ -0.33
SF3A1-205ENST00000463818 OTORQ9NRC9 128 aa12.97□□□□□ -0.33
SF3A1-205ENST00000463818 MDFICQ9P1T7 246 aa12.97□□□□□ -0.33
SF3A1-205ENST00000463818 PRO0255Q9UI72 69 aa12.97□□□□□ -0.33
SF3A1-205ENST00000463818 HHLA3Q9XRX5 114 aa12.97□□□□□ -0.33
SF3A1-205ENST00000463818 LENEPQ9Y5L5 61 aa12.97□□□□□ -0.33
SF3A1-205ENST00000463818 ICOSQ9Y6W8 199 aa12.97□□□□□ -0.33
SF3A1-205ENST00000463818 MUC4Q99102 2169 aa12.97□□□□□ -0.33
SF3A1-205ENST00000463818 FXYD6-FXYD2A0A087WZ82 144 aa12.96□□□□□ -0.33
SF3A1-205ENST00000463818 ZNF345Q14585 488 aa12.96□□□□□ -0.33
SF3A1-205ENST00000463818 ACOT6Q3I5F7 207 aaPredicted RBP12.96□□□□□ -0.33
SF3A1-205ENST00000463818 Q6AWC8 147 aa12.96□□□□□ -0.33
SF3A1-205ENST00000463818 C8orf49Q96NF6 230 aa12.96□□□□□ -0.33
SF3A1-205ENST00000463818 LRP1BQ9NZR2 4599 aa12.96□□□□□ -0.34
SF3A1-205ENST00000463818 A0A1W2PPV4 95 aa12.95□□□□□ -0.34
SF3A1-205ENST00000463818 CRYBA4P53673 196 aa12.95□□□□□ -0.34
SF3A1-205ENST00000463818 TMEM183BQ1AE95 376 aa12.95□□□□□ -0.34
SF3A1-205ENST00000463818 TMEM183AQ8IXX5 376 aa12.95□□□□□ -0.34
SF3A1-205ENST00000463818 CMTM2Q8TAZ6 248 aa12.95□□□□□ -0.34
SF3A1-205ENST00000463818 TMED6Q8WW62 240 aa12.95□□□□□ -0.34
SF3A1-205ENST00000463818 RPH3ALQ9UNE2 315 aa12.95□□□□□ -0.34
SF3A1-205ENST00000463818 HMSDA8MTL9 139 aa12.94□□□□□ -0.34
SF3A1-205ENST00000463818 SIVA1O15304 175 aa12.94□□□□□ -0.34
SF3A1-205ENST00000463818 BTF3P20290 206 aaKnown RBP12.94□□□□□ -0.34
SF3A1-205ENST00000463818 RAB2AP61019 212 aa12.94□□□□□ -0.34
SF3A1-205ENST00000463818 SERF2P84101 59 aa12.94□□□□□ -0.34
SF3A1-205ENST00000463818 FAM74A1Q5RGS3 127 aa12.94□□□□□ -0.34
SF3A1-205ENST00000463818 FAM159AQ6UWV7 190 aa12.94□□□□□ -0.34
SF3A1-205ENST00000463818 PQLC2Q6ZP29 291 aa12.94□□□□□ -0.34
SF3A1-205ENST00000463818 SPATA12Q7Z6I5 190 aa12.94□□□□□ -0.34
SF3A1-205ENST00000463818 SPXQ9BT56 116 aa12.94□□□□□ -0.34
SF3A1-205ENST00000463818 TAAR5O14804 337 aa12.93□□□□□ -0.34
SF3A1-205ENST00000463818 ATP6V0CP27449 155 aa12.93□□□□□ -0.34
SF3A1-205ENST00000463818 GOLT1AQ6ZVE7 132 aa12.93□□□□□ -0.34
SF3A1-205ENST00000463818 OR10G4Q8NGN3 311 aa12.93□□□□□ -0.34
SF3A1-205ENST00000463818 OR10G9Q8NGN4 311 aa12.93□□□□□ -0.34
SF3A1-205ENST00000463818 OR10G7Q8NGN6 311 aa12.93□□□□□ -0.34
SF3A1-205ENST00000463818 TRGV11A0A075B6L2 103 aa12.92□□□□□ -0.34
SF3A1-205ENST00000463818 TRGV4A0A0C4DH28 118 aa12.92□□□□□ -0.34
SF3A1-205ENST00000463818 HMGB3O15347 200 aaKnown RBP12.92□□□□□ -0.34
SF3A1-205ENST00000463818 ARPC5O15511 151 aa12.92□□□□□ -0.34
SF3A1-205ENST00000463818 NXPH4O95158 308 aa12.92□□□□□ -0.34
SF3A1-205ENST00000463818 SFTA3P0C7M3 94 aa12.92□□□□□ -0.34
SF3A1-205ENST00000463818 MRPL23Q16540 153 aaKnown RBP12.92□□□□□ -0.34
SF3A1-205ENST00000463818 LYPD5Q6UWN5 251 aa12.92□□□□□ -0.34
SF3A1-205ENST00000463818 ARL6IP6Q8N6S5 226 aa12.92□□□□□ -0.34
SF3A1-205ENST00000463818 OR11H4Q8NGC9 324 aa12.92□□□□□ -0.34
SF3A1-205ENST00000463818 RASL10AQ92737 203 aa12.92□□□□□ -0.34
SF3A1-205ENST00000463818 ZNF479Q96JC4 524 aa12.92□□□□□ -0.34
SF3A1-205ENST00000463818 KRTAP4-5Q9BYR2 181 aa12.92□□□□□ -0.34
SF3A1-205ENST00000463818 GNRH2O43555 120 aa12.91□□□□□ -0.34
SF3A1-205ENST00000463818 LINC00315P59091 139 aa12.91□□□□□ -0.34
SF3A1-205ENST00000463818 RPL7L1Q6DKI1 246 aaKnown RBP12.91□□□□□ -0.34
SF3A1-205ENST00000463818 IQCF2Q8IXL9 164 aa12.91□□□□□ -0.34
SF3A1-205ENST00000463818 KCNRGQ8N5I3 272 aa12.91□□□□□ -0.34
SF3A1-205ENST00000463818 HSD17B11Q8NBQ5 300 aa12.91□□□□□ -0.34
SF3A1-205ENST00000463818 CYTL1Q9NRR1 136 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms