RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 FAM19A2Q8N3H0 131 aa9.68□□□□□ -0.86
VAPB-203ENST00000463370 URB1-AS1Q96HZ7 61 aa9.68□□□□□ -0.86
VAPB-203ENST00000463370 KCNS1Q96KK3 526 aa9.68□□□□□ -0.86
VAPB-203ENST00000463370 LOC102724200A0A096LPH7 203 aaPredicted RBP9.68□□□□□ -0.86
VAPB-203ENST00000463370 IGKV3D-20A0A0C4DH25 116 aa9.68□□□□□ -0.86
VAPB-203ENST00000463370 FABP5P3A8MUU1 101 aa9.68□□□□□ -0.86
VAPB-203ENST00000463370 J3KRW8 73 aa9.68□□□□□ -0.86
VAPB-203ENST00000463370 PMCHP20382 165 aa9.68□□□□□ -0.86
VAPB-203ENST00000463370 KLF5Q13887 457 aaPredicted RBP9.68□□□□□ -0.86
VAPB-203ENST00000463370 RNF152Q8N8N0 203 aa9.68□□□□□ -0.86
VAPB-203ENST00000463370 SAMD10Q9BYL1 202 aa9.68□□□□□ -0.86
VAPB-203ENST00000463370 ESM1Q9NQ30 184 aa9.68□□□□□ -0.86
VAPB-203ENST00000463370 GPX1P07203 203 aa9.67□□□□□ -0.86
VAPB-203ENST00000463370 HOXD3P31249 432 aaPredicted RBP9.67□□□□□ -0.86
VAPB-203ENST00000463370 TCTEX1D4Q5JR98 221 aa9.67□□□□□ -0.86
VAPB-203ENST00000463370 UBE2E2Q96LR5 201 aa9.67□□□□□ -0.86
VAPB-203ENST00000463370 DNAJC9-AS1A6NH13 148 aa9.67□□□□□ -0.86
VAPB-203ENST00000463370 IGLC6P0CF74 106 aa9.67□□□□□ -0.86
VAPB-203ENST00000463370 PAFAH1B2P68402 229 aa9.67□□□□□ -0.86
VAPB-203ENST00000463370 RIGQ13278 110 aa9.67□□□□□ -0.86
VAPB-203ENST00000463370 Q6AWC8 147 aa9.67□□□□□ -0.86
VAPB-203ENST00000463370 WFDC3Q8IUB2 231 aa9.67□□□□□ -0.86
VAPB-203ENST00000463370 KLHDC1Q8N7A1 406 aa9.67□□□□□ -0.86
VAPB-203ENST00000463370 UFC1Q9Y3C8 167 aa9.67□□□□□ -0.86
VAPB-203ENST00000463370 LINC00587B1AMM8 73 aa9.66□□□□□ -0.86
VAPB-203ENST00000463370 KIR3DS1Q14943 382 aa9.66□□□□□ -0.86
VAPB-203ENST00000463370 LINC01559Q495D7 138 aa9.66□□□□□ -0.86
VAPB-203ENST00000463370 FER1L6-AS1Q8NA97 138 aa9.66□□□□□ -0.86
VAPB-203ENST00000463370 DCANP1Q8TF63 244 aa9.66□□□□□ -0.86
VAPB-203ENST00000463370 FOXC2Q99958 501 aa9.66□□□□□ -0.86
VAPB-203ENST00000463370 MTORP42345 2549 aa9.66□□□□□ -0.86
VAPB-203ENST00000463370 ZNF324O75467 553 aaPredicted RBP9.66□□□□□ -0.86
VAPB-203ENST00000463370 AMTP48728 403 aa9.66□□□□□ -0.86
VAPB-203ENST00000463370 GATD1Q8NB37 220 aa9.66□□□□□ -0.86
VAPB-203ENST00000463370 DUX3Q96PT4 197 aa9.66□□□□□ -0.86
VAPB-203ENST00000463370 CLEC5AQ9NY25 188 aa9.66□□□□□ -0.86
VAPB-203ENST00000463370 MSRB1Q9NZV6 116 aa9.66□□□□□ -0.86
VAPB-203ENST00000463370 CTRLP40313 264 aa9.65□□□□□ -0.86
VAPB-203ENST00000463370 TFPI2P48307 235 aa9.65□□□□□ -0.86
VAPB-203ENST00000463370 HIST1H1AQ02539 215 aaPredicted RBP9.65□□□□□ -0.86
VAPB-203ENST00000463370 Q6ZSV7 163 aa9.65□□□□□ -0.86
VAPB-203ENST00000463370 ZFAND2AQ8N6M9 145 aa9.65□□□□□ -0.86
VAPB-203ENST00000463370 SLURP1P55000 103 aa9.65□□□□□ -0.87
VAPB-203ENST00000463370 RNASEKQ6P5S7 137 aaKnown RBP9.65□□□□□ -0.87
VAPB-203ENST00000463370 NIT1Q86X76 327 aa9.65□□□□□ -0.87
VAPB-203ENST00000463370 AMN1Q8IY45 258 aa9.65□□□□□ -0.87
VAPB-203ENST00000463370 YAE1D1Q9NRH1 226 aa9.65□□□□□ -0.87
VAPB-203ENST00000463370 PPP1R14DQ9NXH3 145 aa9.65□□□□□ -0.87
VAPB-203ENST00000463370 OTOGQ6ZRI0 2925 aa9.64□□□□□ -0.87
VAPB-203ENST00000463370 SCGB1D1O95968 90 aa9.64□□□□□ -0.87
VAPB-203ENST00000463370 NTF3P20783 257 aa9.64□□□□□ -0.87
VAPB-203ENST00000463370 SRSF2Q01130 221 aaKnown RBP9.64□□□□□ -0.87
VAPB-203ENST00000463370 ADAMTSL5Q6ZMM2 481 aa9.64□□□□□ -0.87
VAPB-203ENST00000463370 ZNF493Q6ZR52 646 aa9.64□□□□□ -0.87
VAPB-203ENST00000463370 OR8A1Q8NGG7 326 aa9.64□□□□□ -0.87
VAPB-203ENST00000463370 OR10J6PQ8NGY7 276 aa9.64□□□□□ -0.87
VAPB-203ENST00000463370 MS4A6AQ9H2W1 248 aa9.64□□□□□ -0.87
VAPB-203ENST00000463370 NOTCH2Q04721 2471 aa9.64□□□□□ -0.87
VAPB-203ENST00000463370 OVOL1O14753 267 aa9.64□□□□□ -0.87
VAPB-203ENST00000463370 CD5LO43866 347 aa9.64□□□□□ -0.87
VAPB-203ENST00000463370 RPS20P60866 119 aaKnown RBP9.64□□□□□ -0.87
VAPB-203ENST00000463370 S100A12P80511 92 aa9.64□□□□□ -0.87
VAPB-203ENST00000463370 TWIST1Q15672 202 aa9.64□□□□□ -0.87
VAPB-203ENST00000463370 PMCHL1Q16048 86 aa9.64□□□□□ -0.87
VAPB-203ENST00000463370 DNLZQ5SXM8 178 aa9.64□□□□□ -0.87
VAPB-203ENST00000463370 REC114Q7Z4M0 266 aa9.64□□□□□ -0.87
VAPB-203ENST00000463370 TMEM86BQ8N661 226 aa9.64□□□□□ -0.87
VAPB-203ENST00000463370 BORCS7Q96B45 105 aa9.64□□□□□ -0.87
VAPB-203ENST00000463370 SMR3AQ99954 134 aa9.64□□□□□ -0.87
VAPB-203ENST00000463370 PRO1933Q9H354 126 aa9.64□□□□□ -0.87
VAPB-203ENST00000463370 WFDC12Q8WWY7 111 aa9.63□□□□□ -0.87
VAPB-203ENST00000463370 LINC00477Q96M19 166 aa9.63□□□□□ -0.87
VAPB-203ENST00000463370 A0A1B0GW15 77 aa9.63□□□□□ -0.87
VAPB-203ENST00000463370 FAM19A4Q96LR4 140 aa9.63□□□□□ -0.87
VAPB-203ENST00000463370 C2orf70A6NJV1 201 aa9.62□□□□□ -0.87
VAPB-203ENST00000463370 ZNF688P0C7X2 276 aa9.62□□□□□ -0.87
VAPB-203ENST00000463370 KHDC1LQ5JSQ8 128 aa9.62□□□□□ -0.87
VAPB-203ENST00000463370 ZNF664Q8N3J9 261 aa9.62□□□□□ -0.87
VAPB-203ENST00000463370 NAGKQ9UJ70 344 aa9.62□□□□□ -0.87
VAPB-203ENST00000463370 LGALS9O00182 355 aa9.61□□□□□ -0.87
VAPB-203ENST00000463370 SPRY2O43597 315 aa9.61□□□□□ -0.87
VAPB-203ENST00000463370 HSBP1O75506 76 aa9.61□□□□□ -0.87
VAPB-203ENST00000463370 CSN3P07498 182 aa9.61□□□□□ -0.87
VAPB-203ENST00000463370 KRTDAPP60985 99 aa9.61□□□□□ -0.87
VAPB-203ENST00000463370 TDRG1Q3Y452 100 aa9.61□□□□□ -0.87
VAPB-203ENST00000463370 FAM104BQ5XKR9 115 aa9.61□□□□□ -0.87
VAPB-203ENST00000463370 C11orf44Q8N8P7 122 aa9.61□□□□□ -0.87
VAPB-203ENST00000463370 OR11H1Q8NG94 326 aa9.61□□□□□ -0.87
VAPB-203ENST00000463370 CNFNQ9BYD5 112 aa9.61□□□□□ -0.87
VAPB-203ENST00000463370 D6R8Y8 96 aa9.61□□□□□ -0.87
VAPB-203ENST00000463370 SMKR1H3BMG3 65 aa9.61□□□□□ -0.87
VAPB-203ENST00000463370 Q8N976 141 aa9.61□□□□□ -0.87
VAPB-203ENST00000463370 OR10AG1Q8NH19 301 aa9.61□□□□□ -0.87
VAPB-203ENST00000463370 LENEPQ9Y5L5 61 aa9.61□□□□□ -0.87
VAPB-203ENST00000463370 NIPBLQ6KC79 2804 aaeCLIP9.61□□□□□ -0.87
VAPB-203ENST00000463370 SETD2Q9BYW2 2564 aaPredicted RBP9.61□□□□□ -0.87
VAPB-203ENST00000463370 MRPL51Q4U2R6 128 aaKnown RBP9.6□□□□□ -0.87
VAPB-203ENST00000463370 PSMG4Q5JS54 123 aa9.6□□□□□ -0.87
VAPB-203ENST00000463370 M0R2Z0 102 aa9.6□□□□□ -0.87
VAPB-203ENST00000463370 GAS8-AS1O95177 125 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms