RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 VPS25Q9BRG1 176 aa1.44□□□□□ -2.18
GPNMB-205ENST00000463011 LIMD2Q9BT23 127 aa1.44□□□□□ -2.18
GPNMB-205ENST00000463011 TPT1P8Q9HAU6 139 aa1.44□□□□□ -2.18
GPNMB-205ENST00000463011 ADGRB2O60241 1585 aa1.43□□□□□ -2.18
GPNMB-205ENST00000463011 DISP2A7MBM2 1401 aa1.43□□□□□ -2.18
GPNMB-205ENST00000463011 FAM236AA0A1B0GUQ0 79 aa1.43□□□□□ -2.18
GPNMB-205ENST00000463011 FAM236BA0A1B0GV22 79 aa1.43□□□□□ -2.18
GPNMB-205ENST00000463011 IFITM5A6NNB3 132 aa1.43□□□□□ -2.18
GPNMB-205ENST00000463011 BBIP1A8MTZ0 92 aa1.43□□□□□ -2.18
GPNMB-205ENST00000463011 JMJD7-PLA2G4BH0Y9G9 81 aa1.43□□□□□ -2.18
GPNMB-205ENST00000463011 CDC42EP2O14613 210 aa1.43□□□□□ -2.18
GPNMB-205ENST00000463011 NCS1P62166 190 aa1.43□□□□□ -2.18
GPNMB-205ENST00000463011 CTAGE3PQ8IX95 158 aa1.43□□□□□ -2.18
GPNMB-205ENST00000463011 LPAR5Q9H1C0 372 aa1.43□□□□□ -2.18
GPNMB-205ENST00000463011 WFDC10AQ9H1F0 79 aa1.43□□□□□ -2.18
GPNMB-205ENST00000463011 PRG4Q92954 1404 aaPredicted RBP1.42□□□□□ -2.18
GPNMB-205ENST00000463011 ERBINQ96RT1 1412 aa1.42□□□□□ -2.18
GPNMB-205ENST00000463011 RTTNQ86VV8 2226 aa1.42□□□□□ -2.18
GPNMB-205ENST00000463011 A6NN06 94 aa1.42□□□□□ -2.18
GPNMB-205ENST00000463011 M0R129 80 aa1.42□□□□□ -2.18
GPNMB-205ENST00000463011 SULT1C4O75897 302 aa1.42□□□□□ -2.18
GPNMB-205ENST00000463011 IGHV3-33P01772 117 aa1.42□□□□□ -2.18
GPNMB-205ENST00000463011 TSPAN19P0C672 248 aa1.42□□□□□ -2.18
GPNMB-205ENST00000463011 LYNX1P0DP58 116 aa1.42□□□□□ -2.18
GPNMB-205ENST00000463011 DNAJB13P59910 316 aa1.42□□□□□ -2.18
GPNMB-205ENST00000463011 ASB16-AS1Q495Z4 193 aa1.42□□□□□ -2.18
GPNMB-205ENST00000463011 IZUMO2Q6UXV1 221 aa1.42□□□□□ -2.18
GPNMB-205ENST00000463011 LSM2Q9Y333 95 aaKnown RBP1.42□□□□□ -2.18
GPNMB-205ENST00000463011 FREM1Q5H8C1 2179 aa1.42□□□□□ -2.18
GPNMB-205ENST00000463011 CEP192Q8TEP8 1941 aa1.42□□□□□ -2.18
GPNMB-205ENST00000463011 GPR98Q8WXG9 6306 aa1.41□□□□□ -2.18
GPNMB-205ENST00000463011 CR1P17927 2039 aa1.41□□□□□ -2.18
GPNMB-205ENST00000463011 TRAV23DV6A0A075B6W5 121 aa1.41□□□□□ -2.18
GPNMB-205ENST00000463011 RBP4P02753 201 aa1.41□□□□□ -2.18
GPNMB-205ENST00000463011 PRB1P04280 392 aa1.41□□□□□ -2.18
GPNMB-205ENST00000463011 RPS25P62851 125 aaKnown RBP1.41□□□□□ -2.18
GPNMB-205ENST00000463011 PLGLB1Q02325 96 aa1.41□□□□□ -2.18
GPNMB-205ENST00000463011 TCTEX1D1Q8N7M0 179 aa1.41□□□□□ -2.18
GPNMB-205ENST00000463011 OR10AC1Q8NH08 325 aa1.41□□□□□ -2.18
GPNMB-205ENST00000463011 PAIP2BQ9ULR5 123 aaKnown RBP1.41□□□□□ -2.18
GPNMB-205ENST00000463011 PCDH15Q96QU1 1955 aa1.4□□□□□ -2.19
GPNMB-205ENST00000463011 IGLV3-32A0A0A0MS00 114 aa1.4□□□□□ -2.19
GPNMB-205ENST00000463011 CCSMST1Q4G0I0 132 aa1.4□□□□□ -2.19
GPNMB-205ENST00000463011 Q6ZSA8 131 aa1.4□□□□□ -2.19
GPNMB-205ENST00000463011 LINC00299Q6ZSB3 139 aa1.4□□□□□ -2.19
GPNMB-205ENST00000463011 C3orf62Q6ZUJ4 267 aa1.4□□□□□ -2.19
GPNMB-205ENST00000463011 MRPL57Q9BQC6 102 aaKnown RBP1.4□□□□□ -2.19
GPNMB-205ENST00000463011 PLXNA4Q9HCM2 1894 aa1.39□□□□□ -2.19
GPNMB-205ENST00000463011 TNRC6BQ9UPQ9 1833 aaKnown RBP1.39□□□□□ -2.19
GPNMB-205ENST00000463011 A0A1W2PPB8 328 aa1.39□□□□□ -2.19
GPNMB-205ENST00000463011 A0A1W2PRS3 328 aa1.39□□□□□ -2.19
GPNMB-205ENST00000463011 KIR3DP1A8MWS1 328 aa1.39□□□□□ -2.19
GPNMB-205ENST00000463011 NPFFO15130 113 aa1.39□□□□□ -2.19
GPNMB-205ENST00000463011 NCR2O95944 276 aa1.39□□□□□ -2.19
GPNMB-205ENST00000463011 IGLV3-1P01715 115 aa1.39□□□□□ -2.19
GPNMB-205ENST00000463011 ADCYAP1P18509 176 aa1.39□□□□□ -2.19
GPNMB-205ENST00000463011 COPZ1P61923 177 aa1.39□□□□□ -2.19
GPNMB-205ENST00000463011 IDO2Q6ZQW0 420 aa1.39□□□□□ -2.19
GPNMB-205ENST00000463011 SNX29P2Q8IUI4 249 aa1.39□□□□□ -2.19
GPNMB-205ENST00000463011 PLPP5Q8NEB5 264 aa1.39□□□□□ -2.19
GPNMB-205ENST00000463011 LINC00526Q96FQ7 95 aa1.39□□□□□ -2.19
GPNMB-205ENST00000463011 ERG28Q9UKR5 140 aa1.39□□□□□ -2.19
GPNMB-205ENST00000463011 WDR97A6NE52 1622 aa1.39□□□□□ -2.19
GPNMB-205ENST00000463011 MYOFQ9NZM1 2061 aa1.38□□□□□ -2.19
GPNMB-205ENST00000463011 ZNF670-ZNF695F2Z2N8 137 aa1.38□□□□□ -2.19
GPNMB-205ENST00000463011 YPEL1O60688 119 aa1.38□□□□□ -2.19
GPNMB-205ENST00000463011 PRB4P10163 310 aaPredicted RBP1.38□□□□□ -2.19
GPNMB-205ENST00000463011 IL7P13232 177 aa1.38□□□□□ -2.19
GPNMB-205ENST00000463011 CSAG1Q6PB30 78 aa1.38□□□□□ -2.19
GPNMB-205ENST00000463011 ODF3Q96PU9 254 aa1.38□□□□□ -2.19
GPNMB-205ENST00000463011 POLEQ07864 2286 aa1.38□□□□□ -2.19
GPNMB-205ENST00000463011 ALPK2Q86TB3 2170 aa1.37□□□□□ -2.19
GPNMB-205ENST00000463011 TRBV20-1A0A075B6N2 111 aa1.37□□□□□ -2.19
GPNMB-205ENST00000463011 A0A0J9YY99 117 aa1.37□□□□□ -2.19
GPNMB-205ENST00000463011 IGKCP01834 107 aa1.37□□□□□ -2.19
GPNMB-205ENST00000463011 NOP16Q9Y3C1 178 aaKnown RBP1.37□□□□□ -2.19
GPNMB-205ENST00000463011 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.37□□□□□ -2.19
GPNMB-205ENST00000463011 SCN3AQ9NY46 2000 aa1.37□□□□□ -2.19
GPNMB-205ENST00000463011 ERCC6Q03468 1493 aa1.37□□□□□ -2.19
GPNMB-205ENST00000463011 TRAV17A0A0B4J275 112 aa1.36□□□□□ -2.19
GPNMB-205ENST00000463011 TMEM30CPA0ZSE6 113 aa1.36□□□□□ -2.19
GPNMB-205ENST00000463011 PTPRGP23470 1445 aa1.36□□□□□ -2.19
GPNMB-205ENST00000463011 SPATA45Q537H7 98 aa1.36□□□□□ -2.19
GPNMB-205ENST00000463011 OCIAD2Q56VL3 154 aa1.36□□□□□ -2.19
GPNMB-205ENST00000463011 SLC25A26Q70HW3 274 aa1.36□□□□□ -2.19
GPNMB-205ENST00000463011 ATP6V0E2Q8NHE4 81 aa1.36□□□□□ -2.19
GPNMB-205ENST00000463011 MED12LQ86YW9 2145 aa1.36□□□□□ -2.19
GPNMB-205ENST00000463011 DIDO1Q9BTC0 2240 aaKnown RBP1.35□□□□□ -2.19
GPNMB-205ENST00000463011 EFCAB10A6NFE3 127 aa1.35□□□□□ -2.19
GPNMB-205ENST00000463011 J3QLW9 94 aa1.35□□□□□ -2.19
GPNMB-205ENST00000463011 K7EP13 123 aa1.35□□□□□ -2.19
GPNMB-205ENST00000463011 M0R2P5 195 aa1.35□□□□□ -2.19
GPNMB-205ENST00000463011 GNG7O60262 68 aa1.35□□□□□ -2.19
GPNMB-205ENST00000463011 POLR2JP52435 117 aaKnown RBP1.35□□□□□ -2.19
GPNMB-205ENST00000463011 RPL37AP61513 92 aaKnown RBP1.35□□□□□ -2.19
GPNMB-205ENST00000463011 IQCJQ1A5X6 159 aa1.35□□□□□ -2.19
GPNMB-205ENST00000463011 ARL11Q969Q4 196 aa1.35□□□□□ -2.19
GPNMB-205ENST00000463011 TAS2R8Q9NYW2 309 aa1.35□□□□□ -2.19
GPNMB-205ENST00000463011 BOKQ9UMX3 212 aaPredicted RBP1.35□□□□□ -2.19
GPNMB-205ENST00000463011 C22orf24Q9Y442 160 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms