RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 LGALS9O00182 355 aa5.49□□□□□ -1.53
UBE4B-204ENST00000462658 SLC17A3O00476 420 aa5.49□□□□□ -1.53
UBE4B-204ENST00000462658 CIDEAO60543 219 aa5.49□□□□□ -1.53
UBE4B-204ENST00000462658 ZNF253O75346 499 aa5.49□□□□□ -1.53
UBE4B-204ENST00000462658 SNAPINO95295 136 aa5.49□□□□□ -1.53
UBE4B-204ENST00000462658 PRSS1P07477 247 aa5.49□□□□□ -1.53
UBE4B-204ENST00000462658 PSG9Q00887 426 aa5.49□□□□□ -1.53
UBE4B-204ENST00000462658 PNRC1Q12796 327 aaPredicted RBP5.49□□□□□ -1.53
UBE4B-204ENST00000462658 KLF5Q13887 457 aaPredicted RBP5.49□□□□□ -1.53
UBE4B-204ENST00000462658 TMEM241Q24JQ0 296 aa5.49□□□□□ -1.53
UBE4B-204ENST00000462658 DEFB136Q30KP8 78 aa5.49□□□□□ -1.53
UBE4B-204ENST00000462658 ATRAIDQ6UW56 229 aa5.49□□□□□ -1.53
UBE4B-204ENST00000462658 SIGLEC15Q6ZMC9 328 aa5.49□□□□□ -1.53
UBE4B-204ENST00000462658 EXOC3-AS1Q8N2X6 119 aa5.49□□□□□ -1.53
UBE4B-204ENST00000462658 CMTM2Q8TAZ6 248 aa5.49□□□□□ -1.53
UBE4B-204ENST00000462658 HIST1H2BAQ96A08 127 aa5.49□□□□□ -1.53
UBE4B-204ENST00000462658 CITED2Q99967 270 aaPredicted RBP5.49□□□□□ -1.53
UBE4B-204ENST00000462658 TCEAL7Q9BRU2 100 aa5.49□□□□□ -1.53
UBE4B-204ENST00000462658 DERL1Q9BUN8 251 aa5.49□□□□□ -1.53
UBE4B-204ENST00000462658 RHPN1-AS1Q9BWJ2 59 aa5.49□□□□□ -1.53
UBE4B-204ENST00000462658 NAT8Q9UHE5 227 aa5.49□□□□□ -1.53
UBE4B-204ENST00000462658 PRKDCP78527 4128 aaKnown RBP5.48□□□□□ -1.53
UBE4B-204ENST00000462658 TMEM213A2RRL7 107 aa5.48□□□□□ -1.53
UBE4B-204ENST00000462658 A8MWP6 167 aa5.48□□□□□ -1.53
UBE4B-204ENST00000462658 PEX7O00628 323 aa5.48□□□□□ -1.53
UBE4B-204ENST00000462658 CHEK1O14757 476 aa5.48□□□□□ -1.53
UBE4B-204ENST00000462658 SCO1O75880 301 aa5.48□□□□□ -1.53
UBE4B-204ENST00000462658 BMI1P35226 326 aa5.48□□□□□ -1.53
UBE4B-204ENST00000462658 AKR1C3P42330 323 aa5.48□□□□□ -1.53
UBE4B-204ENST00000462658 RPL35P42766 123 aaKnown RBP5.48□□□□□ -1.53
UBE4B-204ENST00000462658 MEOX2P50222 304 aa5.48□□□□□ -1.53
UBE4B-204ENST00000462658 CNN1P51911 297 aaKnown RBP5.48□□□□□ -1.53
UBE4B-204ENST00000462658 GNG5P63218 68 aa5.48□□□□□ -1.53
UBE4B-204ENST00000462658 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.48□□□□□ -1.53
UBE4B-204ENST00000462658 STPG4Q8N801 248 aa5.48□□□□□ -1.53
UBE4B-204ENST00000462658 C5orf17Q8NAS9 161 aa5.48□□□□□ -1.53
UBE4B-204ENST00000462658 DUX3Q96PT4 197 aa5.48□□□□□ -1.53
UBE4B-204ENST00000462658 ZNF331Q9NQX6 463 aaPredicted RBP5.48□□□□□ -1.53
UBE4B-204ENST00000462658 RPH3ALQ9UNE2 315 aa5.48□□□□□ -1.53
UBE4B-204ENST00000462658 LOC105371267A0A1B0GV96 52 aa5.47□□□□□ -1.53
UBE4B-204ENST00000462658 C2orf70A6NJV1 201 aa5.47□□□□□ -1.53
UBE4B-204ENST00000462658 CCL24O00175 119 aa5.47□□□□□ -1.53
UBE4B-204ENST00000462658 TSHBP01222 138 aa5.47□□□□□ -1.53
UBE4B-204ENST00000462658 TCRAP04437 139 aa5.47□□□□□ -1.53
UBE4B-204ENST00000462658 CSN1S1P47710 185 aa5.47□□□□□ -1.53
UBE4B-204ENST00000462658 TAS2R60P59551 318 aa5.47□□□□□ -1.53
UBE4B-204ENST00000462658 KRTAP10-3P60369 221 aa5.47□□□□□ -1.53
UBE4B-204ENST00000462658 RPL23P62829 140 aaKnown RBP5.47□□□□□ -1.53
UBE4B-204ENST00000462658 DLX4Q92988 240 aaPredicted RBP5.47□□□□□ -1.53
UBE4B-204ENST00000462658 LINC00479Q96M42 142 aa5.47□□□□□ -1.53
UBE4B-204ENST00000462658 SLC50A1Q9BRV3 221 aa5.47□□□□□ -1.53
UBE4B-204ENST00000462658 ATG101Q9BSB4 218 aa5.47□□□□□ -1.53
UBE4B-204ENST00000462658 RPS10P5Q9NQ39 176 aa5.47□□□□□ -1.53
UBE4B-204ENST00000462658 TRBV20OR9-2A0A075B6H5 130 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 TRAV34A0A0B4J273 112 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 C7orf77A4D0Y5 90 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 B4DEV8 164 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 C9JCJ5 164 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 K7EQM0 130 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 M0R3E3 92 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 ISLRO14498 428 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 S100A9P06702 114 aaKnown RBP5.46□□□□□ -1.54
UBE4B-204ENST00000462658 FOLR2P14207 255 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 CBLN1P23435 193 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 HLA-DMBP28068 263 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 GNG4P50150 75 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 UBE2G1P62253 170 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 RHEBQ15382 184 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 ADIRFQ15847 76 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 TMEM183BQ1AE95 376 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 NSUN5P1Q3KNT7 163 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 LCN12Q6JVE5 192 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 GOLT1AQ6ZVE7 132 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 TCF24Q7RTU0 167 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 LINC01551Q86U37 167 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 ARL6IP6Q8N6S5 226 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.46□□□□□ -1.54
UBE4B-204ENST00000462658 OR9G4Q8NGQ1 327 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 OCC1Q8TAD7 63 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 FMC1Q96HJ9 113 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 NRN1Q9NPD7 142 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 CLEC5AQ9NY25 188 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 KLF12Q9Y4X4 402 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 SELENOKQ9Y6D0 94 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 LY96Q9Y6Y9 160 aa5.46□□□□□ -1.54
UBE4B-204ENST00000462658 IGKV3-7A0A075B6H7 116 aa5.45□□□□□ -1.54
UBE4B-204ENST00000462658 TRAV8-2A0A0B4J237 113 aa5.45□□□□□ -1.54
UBE4B-204ENST00000462658 SERTM2A0A1B0GWG4 89 aa5.45□□□□□ -1.54
UBE4B-204ENST00000462658 ZNF705FA8MVS1 300 aaPredicted RBP5.45□□□□□ -1.54
UBE4B-204ENST00000462658 CSN3P07498 182 aa5.45□□□□□ -1.54
UBE4B-204ENST00000462658 BTN1A1Q13410 526 aa5.45□□□□□ -1.54
UBE4B-204ENST00000462658 PSG3Q16557 428 aa5.45□□□□□ -1.54
UBE4B-204ENST00000462658 CENPWQ5EE01 88 aa5.45□□□□□ -1.54
UBE4B-204ENST00000462658 ADAMTSL5Q6ZMM2 481 aa5.45□□□□□ -1.54
UBE4B-204ENST00000462658 TRPT1Q86TN4 253 aaKnown RBP5.45□□□□□ -1.54
UBE4B-204ENST00000462658 BAGE2Q86Y30 109 aa5.45□□□□□ -1.54
UBE4B-204ENST00000462658 NDUFA11Q86Y39 141 aa5.45□□□□□ -1.54
UBE4B-204ENST00000462658 RNF182Q8N6D2 247 aa5.45□□□□□ -1.54
UBE4B-204ENST00000462658 SGK494Q96LW2 274 aa5.45□□□□□ -1.54
UBE4B-204ENST00000462658 IGF2BP2-AS1Q96M15 143 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms