RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 UPK3BQ9BT76 320 aa6.36□□□□□ -1.39
BRCA1-207ENST00000461798 PAXXQ9BUH6 204 aa6.36□□□□□ -1.39
BRCA1-207ENST00000461798 GSN-AS1Q9NRJ2 163 aa6.36□□□□□ -1.39
BRCA1-207ENST00000461798 HSPB11Q9Y547 144 aa6.36□□□□□ -1.39
BRCA1-207ENST00000461798 PKHD1P08F94 4074 aa6.35□□□□□ -1.39
BRCA1-207ENST00000461798 GPX1P07203 203 aa6.35□□□□□ -1.39
BRCA1-207ENST00000461798 PET100P0DJ07 73 aa6.35□□□□□ -1.39
BRCA1-207ENST00000461798 RNASE4P34096 147 aaKnown RBP6.35□□□□□ -1.39
BRCA1-207ENST00000461798 ZNF138P52744 262 aa6.35□□□□□ -1.39
BRCA1-207ENST00000461798 TCL1AP56279 114 aa6.35□□□□□ -1.39
BRCA1-207ENST00000461798 BTN1A1Q13410 526 aa6.35□□□□□ -1.39
BRCA1-207ENST00000461798 ESRGQ1W209 222 aa6.35□□□□□ -1.39
BRCA1-207ENST00000461798 C6orf223Q8N319 242 aa6.35□□□□□ -1.39
BRCA1-207ENST00000461798 Q9H8V8 135 aa6.35□□□□□ -1.39
BRCA1-207ENST00000461798 IGHV1OR15-1A0A075B7D0 117 aa6.34□□□□□ -1.39
BRCA1-207ENST00000461798 IGKV2-40A0A087WW87 121 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-207ENST00000461798 SSNA1O43805 119 aa6.34□□□□□ -1.39
BRCA1-207ENST00000461798 IFNA5P01569 189 aa6.34□□□□□ -1.39
BRCA1-207ENST00000461798 IGKV2D-40P01614 121 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-207ENST00000461798 OR10J4P0C629 311 aa6.34□□□□□ -1.39
BRCA1-207ENST00000461798 BTF3P20290 206 aaKnown RBP6.34□□□□□ -1.39
BRCA1-207ENST00000461798 RPL12P30050 165 aaKnown RBP6.34□□□□□ -1.39
BRCA1-207ENST00000461798 PRR9Q5T870 116 aa6.34□□□□□ -1.39
BRCA1-207ENST00000461798 FAM122CQ6P4D5 195 aa6.34□□□□□ -1.39
BRCA1-207ENST00000461798 SCGB1C1Q8TD33 95 aa6.34□□□□□ -1.39
BRCA1-207ENST00000461798 PHYHIPLQ96FC7 376 aa6.34□□□□□ -1.39
BRCA1-207ENST00000461798 VSIG2Q96IQ7 327 aa6.34□□□□□ -1.39
BRCA1-207ENST00000461798 TMPRSS5Q9H3S3 457 aa6.34□□□□□ -1.39
BRCA1-207ENST00000461798 KLF12Q9Y4X4 402 aa6.34□□□□□ -1.39
BRCA1-207ENST00000461798 LENEPQ9Y5L5 61 aa6.34□□□□□ -1.39
BRCA1-207ENST00000461798 TRGV2A0A075B6R0 118 aa6.33□□□□□ -1.4
BRCA1-207ENST00000461798 A0A0J9YY99 117 aa6.33□□□□□ -1.4
BRCA1-207ENST00000461798 A0A1W2PPQ1 181 aa6.33□□□□□ -1.4
BRCA1-207ENST00000461798 RGS13O14921 159 aa6.33□□□□□ -1.4
BRCA1-207ENST00000461798 OR7C2O60412 319 aa6.33□□□□□ -1.4
BRCA1-207ENST00000461798 CSN1S1P47710 185 aa6.33□□□□□ -1.4
BRCA1-207ENST00000461798 TAS2R45P59539 299 aa6.33□□□□□ -1.4
BRCA1-207ENST00000461798 RANP62826 216 aaKnown RBP6.33□□□□□ -1.4
BRCA1-207ENST00000461798 ZNF266Q14584 549 aa6.33□□□□□ -1.4
BRCA1-207ENST00000461798 FFAR4Q5NUL3 377 aa6.33□□□□□ -1.4
BRCA1-207ENST00000461798 ARL6IP6Q8N6S5 226 aa6.33□□□□□ -1.4
BRCA1-207ENST00000461798 TMED6Q8WW62 240 aa6.33□□□□□ -1.4
BRCA1-207ENST00000461798 ST6GAL2Q96JF0 529 aa6.33□□□□□ -1.4
BRCA1-207ENST00000461798 Q9H3A6 140 aa6.33□□□□□ -1.4
BRCA1-207ENST00000461798 WFDC1Q9HC57 220 aa6.33□□□□□ -1.4
BRCA1-207ENST00000461798 TP53TG3Q9ULZ0 132 aa6.33□□□□□ -1.4
BRCA1-207ENST00000461798 MRPS16Q9Y3D3 137 aaKnown RBP6.33□□□□□ -1.4
BRCA1-207ENST00000461798 A0A096LPF7 62 aa6.32□□□□□ -1.4
BRCA1-207ENST00000461798 TRGV1A0A0A0MS02 117 aa6.32□□□□□ -1.4
BRCA1-207ENST00000461798 DIRC3C9JPN6 131 aa6.32□□□□□ -1.4
BRCA1-207ENST00000461798 UBE2L3P68036 154 aaKnown RBP6.32□□□□□ -1.4
BRCA1-207ENST00000461798 SLAQ13239 276 aa6.32□□□□□ -1.4
BRCA1-207ENST00000461798 KHDC3LQ587J8 217 aa6.32□□□□□ -1.4
BRCA1-207ENST00000461798 TTC32Q5I0X7 151 aa6.32□□□□□ -1.4
BRCA1-207ENST00000461798 Q6ZQT7 251 aa6.32□□□□□ -1.4
BRCA1-207ENST00000461798 BATF3Q9NR55 127 aa6.32□□□□□ -1.4
BRCA1-207ENST00000461798 OTORQ9NRC9 128 aa6.32□□□□□ -1.4
BRCA1-207ENST00000461798 MBD2Q9UBB5 411 aa6.32□□□□□ -1.4
BRCA1-207ENST00000461798 Q6AWC8 147 aa6.31□□□□□ -1.4
BRCA1-207ENST00000461798 PQLC2Q6ZP29 291 aa6.31□□□□□ -1.4
BRCA1-207ENST00000461798 ZNF575Q86XF7 245 aa6.31□□□□□ -1.4
BRCA1-207ENST00000461798 IQCF2Q8IXL9 164 aa6.31□□□□□ -1.4
BRCA1-207ENST00000461798 Q8TAT8 98 aa6.31□□□□□ -1.4
BRCA1-207ENST00000461798 KRTAP1-5Q9BYS1 174 aa6.31□□□□□ -1.4
BRCA1-207ENST00000461798 SMIM3Q9BZL3 60 aa6.31□□□□□ -1.4
BRCA1-207ENST00000461798 MUC4Q99102 2169 aa6.3□□□□□ -1.4
BRCA1-207ENST00000461798 PGPA6NDG6 321 aa6.3□□□□□ -1.4
BRCA1-207ENST00000461798 ZNF415Q09FC8 603 aa6.3□□□□□ -1.4
BRCA1-207ENST00000461798 FHL2Q14192 279 aa6.3□□□□□ -1.4
BRCA1-207ENST00000461798 ACOT6Q3I5F7 207 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-207ENST00000461798 TDRG1Q3Y452 100 aa6.3□□□□□ -1.4
BRCA1-207ENST00000461798 RASL10AQ92737 203 aa6.3□□□□□ -1.4
BRCA1-207ENST00000461798 ARPC5LQ9BPX5 153 aa6.3□□□□□ -1.4
BRCA1-207ENST00000461798 SPXQ9BT56 116 aa6.3□□□□□ -1.4
BRCA1-207ENST00000461798 PRO0255Q9UI72 69 aa6.3□□□□□ -1.4
BRCA1-207ENST00000461798 A0A1W2PPV4 95 aa6.29□□□□□ -1.4
BRCA1-207ENST00000461798 CRYBA4P53673 196 aa6.29□□□□□ -1.4
BRCA1-207ENST00000461798 FAM74A1Q5RGS3 127 aa6.29□□□□□ -1.4
BRCA1-207ENST00000461798 OR2G3Q8NGZ4 309 aa6.29□□□□□ -1.4
BRCA1-207ENST00000461798 CMTM2Q8TAZ6 248 aa6.29□□□□□ -1.4
BRCA1-207ENST00000461798 SUN5Q8TC36 379 aa6.29□□□□□ -1.4
BRCA1-207ENST00000461798 MRPL16Q9NX20 251 aaKnown RBP6.29□□□□□ -1.4
BRCA1-207ENST00000461798 MDFICQ9P1T7 246 aa6.29□□□□□ -1.4
BRCA1-207ENST00000461798 HHLA3Q9XRX5 114 aa6.29□□□□□ -1.4
BRCA1-207ENST00000461798 ALG5Q9Y673 324 aa6.29□□□□□ -1.4
BRCA1-207ENST00000461798 ICOSQ9Y6W8 199 aa6.29□□□□□ -1.4
BRCA1-207ENST00000461798 TRGV11A0A075B6L2 103 aa6.28□□□□□ -1.4
BRCA1-207ENST00000461798 EIF3GO75821 320 aaKnown RBP eCLIP6.28□□□□□ -1.4
BRCA1-207ENST00000461798 RAB2AP61019 212 aa6.28□□□□□ -1.4
BRCA1-207ENST00000461798 MRPL23Q16540 153 aaKnown RBP6.28□□□□□ -1.4
BRCA1-207ENST00000461798 MUC21Q5SSG8 566 aa6.28□□□□□ -1.4
BRCA1-207ENST00000461798 FAM159AQ6UWV7 190 aa6.28□□□□□ -1.4
BRCA1-207ENST00000461798 OR10G4Q8NGN3 311 aa6.28□□□□□ -1.4
BRCA1-207ENST00000461798 OR10G9Q8NGN4 311 aa6.28□□□□□ -1.4
BRCA1-207ENST00000461798 OR10G7Q8NGN6 311 aa6.28□□□□□ -1.4
BRCA1-207ENST00000461798 TVP23CQ96ET8 276 aa6.28□□□□□ -1.4
BRCA1-207ENST00000461798 HYLS1Q96M11 299 aa6.28□□□□□ -1.4
BRCA1-207ENST00000461798 AQP10Q96PS8 301 aa6.28□□□□□ -1.4
BRCA1-207ENST00000461798 PSMG3Q9BT73 122 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-207ENST00000461798 TRAV21A0A0B4J279 112 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms