RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 UQCRQO14949 82 aa0.87□□□□□ -2.27
VCL-203ENST00000461383 DEGS1O15121 323 aa0.87□□□□□ -2.27
VCL-203ENST00000461383 HBDP02042 147 aa0.87□□□□□ -2.27
VCL-203ENST00000461383 PAEPP09466 180 aa0.87□□□□□ -2.27
VCL-203ENST00000461383 CKS2P33552 79 aa0.87□□□□□ -2.27
VCL-203ENST00000461383 GTF2A1P52655 376 aaPredicted RBP0.87□□□□□ -2.27
VCL-203ENST00000461383 SMIM7Q9BQ49 75 aa0.87□□□□□ -2.27
VCL-203ENST00000461383 LIMD2Q9BT23 127 aa0.87□□□□□ -2.27
VCL-203ENST00000461383 C19orf12Q9NSK7 152 aa0.87□□□□□ -2.27
VCL-203ENST00000461383 MPC1Q9Y5U8 109 aa0.87□□□□□ -2.27
VCL-203ENST00000461383 OVOS2A0A0G2JMS6 1433 aa0.87□□□□□ -2.27
VCL-203ENST00000461383 COL1A1P02452 1464 aaPredicted RBP0.86□□□□□ -2.27
VCL-203ENST00000461383 HELZP42694 1942 aaKnown RBP0.86□□□□□ -2.27
VCL-203ENST00000461383 TRAV36DV7A0A075B6V5 113 aa0.86□□□□□ -2.27
VCL-203ENST00000461383 A0A0J9YY99 117 aa0.86□□□□□ -2.27
VCL-203ENST00000461383 A0A1W2PPB8 328 aa0.86□□□□□ -2.27
VCL-203ENST00000461383 A0A1W2PRS3 328 aa0.86□□□□□ -2.27
VCL-203ENST00000461383 IFITM5A6NNB3 132 aa0.86□□□□□ -2.27
VCL-203ENST00000461383 KIR3DP1A8MWS1 328 aa0.86□□□□□ -2.27
VCL-203ENST00000461383 SDC4P31431 198 aa0.86□□□□□ -2.27
VCL-203ENST00000461383 FXYD4P59646 89 aa0.86□□□□□ -2.27
VCL-203ENST00000461383 SNRPD3P62318 126 aaKnown RBP0.86□□□□□ -2.27
VCL-203ENST00000461383 OR8B8Q15620 311 aa0.86□□□□□ -2.27
VCL-203ENST00000461383 CCDC153Q494R4 210 aa0.86□□□□□ -2.27
VCL-203ENST00000461383 TCTEX1D1Q8N7M0 179 aa0.86□□□□□ -2.27
VCL-203ENST00000461383 OR8J3Q8NGG0 315 aa0.86□□□□□ -2.27
VCL-203ENST00000461383 NAT14Q8WUY8 206 aa0.86□□□□□ -2.27
VCL-203ENST00000461383 ANP32BQ92688 251 aaKnown RBP0.86□□□□□ -2.27
VCL-203ENST00000461383 BATF3Q9NR55 127 aa0.86□□□□□ -2.27
VCL-203ENST00000461383 DSPPQ9NZW4 1301 aa0.86□□□□□ -2.27
VCL-203ENST00000461383 A0A1B0GX51 115 aa0.85□□□□□ -2.27
VCL-203ENST00000461383 TMEM189A5PLL7 270 aa0.85□□□□□ -2.27
VCL-203ENST00000461383 TCRAP04437 139 aa0.85□□□□□ -2.27
VCL-203ENST00000461383 HIST1H1BP16401 226 aaKnown RBP0.85□□□□□ -2.27
VCL-203ENST00000461383 PCBD1P61457 104 aa0.85□□□□□ -2.27
VCL-203ENST00000461383 CCSMST1Q4G0I0 132 aa0.85□□□□□ -2.27
VCL-203ENST00000461383 HSD17B12Q53GQ0 312 aa0.85□□□□□ -2.27
VCL-203ENST00000461383 IZUMO2Q6UXV1 221 aa0.85□□□□□ -2.27
VCL-203ENST00000461383 Q6ZQY7 126 aa0.85□□□□□ -2.27
VCL-203ENST00000461383 FGD6Q6ZV73 1430 aa0.85□□□□□ -2.27
VCL-203ENST00000461383 TCTE3Q8IZS6 198 aa0.85□□□□□ -2.27
VCL-203ENST00000461383 Q8N6K4 173 aa0.85□□□□□ -2.27
VCL-203ENST00000461383 LPAR5Q9H1C0 372 aa0.85□□□□□ -2.27
VCL-203ENST00000461383 TENM1Q9UKZ4 2725 aa0.85□□□□□ -2.27
VCL-203ENST00000461383 MED23Q9ULK4 1368 aa0.84□□□□□ -2.27
VCL-203ENST00000461383 ZDBF2Q9HCK1 2354 aa0.84□□□□□ -2.27
VCL-203ENST00000461383 BORCS7-ASMTA0A0B4J1R7 106 aa0.84□□□□□ -2.27
VCL-203ENST00000461383 IGHV1-24A0A0C4DH33 117 aa0.84□□□□□ -2.27
VCL-203ENST00000461383 TRBV30A0A0K0K1B3 111 aa0.84□□□□□ -2.27
VCL-203ENST00000461383 PNMA8CA0A1B0GUJ8 204 aa0.84□□□□□ -2.27
VCL-203ENST00000461383 NUPR2A6NF83 97 aa0.84□□□□□ -2.27
VCL-203ENST00000461383 ZNF727A8MUV8 499 aa0.84□□□□□ -2.27
VCL-203ENST00000461383 SMIM24O75264 130 aa0.84□□□□□ -2.27
VCL-203ENST00000461383 MT-ND4LP03901 98 aa0.84□□□□□ -2.27
VCL-203ENST00000461383 SLC25A5P05141 298 aaKnown RBP0.84□□□□□ -2.27
VCL-203ENST00000461383 DBIP07108 87 aaKnown RBP0.84□□□□□ -2.27
VCL-203ENST00000461383 SCGB1A1P11684 91 aa0.84□□□□□ -2.27
VCL-203ENST00000461383 PDE6GP18545 87 aa0.84□□□□□ -2.27
VCL-203ENST00000461383 RPL37AP61513 92 aaKnown RBP0.84□□□□□ -2.27
VCL-203ENST00000461383 Q86TA4 180 aa0.84□□□□□ -2.27
VCL-203ENST00000461383 SBSPONQ8IVN8 264 aa0.84□□□□□ -2.27
VCL-203ENST00000461383 C9JAW5 83 aa0.83□□□□□ -2.28
VCL-203ENST00000461383 TNFSF15O95150 251 aa0.83□□□□□ -2.28
VCL-203ENST00000461383 GYPBP06028 91 aa0.83□□□□□ -2.28
VCL-203ENST00000461383 IDO2Q6ZQW0 420 aa0.83□□□□□ -2.28
VCL-203ENST00000461383 OTOSQ8NHW6 89 aa0.83□□□□□ -2.28
VCL-203ENST00000461383 LZICQ8WZA0 190 aa0.83□□□□□ -2.28
VCL-203ENST00000461383 MAGOHBQ96A72 148 aaKnown RBP0.83□□□□□ -2.28
VCL-203ENST00000461383 HIGD1AQ9Y241 93 aa0.83□□□□□ -2.28
VCL-203ENST00000461383 CDK5RAP2Q96SN8 1893 aa0.83□□□□□ -2.28
VCL-203ENST00000461383 MYH13Q9UKX3 1938 aa0.82□□□□□ -2.28
VCL-203ENST00000461383 TMEM30CPA0ZSE6 113 aa0.82□□□□□ -2.28
VCL-203ENST00000461383 CDC42EP2O14613 210 aa0.82□□□□□ -2.28
VCL-203ENST00000461383 OR2H2O95918 312 aa0.82□□□□□ -2.28
VCL-203ENST00000461383 IGHV3-30P01768 117 aa0.82□□□□□ -2.28
VCL-203ENST00000461383 SCTP09683 121 aa0.82□□□□□ -2.28
VCL-203ENST00000461383 IGHV3-30-5P0DP03 117 aa0.82□□□□□ -2.28
VCL-203ENST00000461383 CCL4P13236 92 aa0.82□□□□□ -2.28
VCL-203ENST00000461383 QRFPP83859 136 aa0.82□□□□□ -2.28
VCL-203ENST00000461383 TMEM244Q5VVB8 128 aa0.82□□□□□ -2.28
VCL-203ENST00000461383 C10orf111Q8N326 155 aa0.82□□□□□ -2.28
VCL-203ENST00000461383 BANF2Q9H503 90 aa0.82□□□□□ -2.28
VCL-203ENST00000461383 JPT1Q9UK76 154 aa0.82□□□□□ -2.28
VCL-203ENST00000461383 KNTC1P50748 2209 aa0.81□□□□□ -2.28
VCL-203ENST00000461383 IL7P13232 177 aa0.81□□□□□ -2.28
VCL-203ENST00000461383 PRB3Q04118 309 aaPredicted RBP0.81□□□□□ -2.28
VCL-203ENST00000461383 ASB16-AS1Q495Z4 193 aa0.81□□□□□ -2.28
VCL-203ENST00000461383 CSAG1Q6PB30 78 aa0.81□□□□□ -2.28
VCL-203ENST00000461383 UNQ5815/PRO19632Q6UWF5 114 aa0.81□□□□□ -2.28
VCL-203ENST00000461383 MRPL36Q9P0J6 103 aaKnown RBP0.81□□□□□ -2.28
VCL-203ENST00000461383 METTL1Q9UBP6 276 aaKnown RBP0.81□□□□□ -2.28
VCL-203ENST00000461383 SPAG17Q6Q759 2223 aa0.81□□□□□ -2.28
VCL-203ENST00000461383 TPST1O60507 370 aa0.8□□□□□ -2.28
VCL-203ENST00000461383 KDELR1P24390 212 aa0.8□□□□□ -2.28
VCL-203ENST00000461383 RHOHQ15669 191 aa0.8□□□□□ -2.28
VCL-203ENST00000461383 IQCJQ1A5X6 159 aa0.8□□□□□ -2.28
VCL-203ENST00000461383 Q6ZS92 163 aa0.8□□□□□ -2.28
VCL-203ENST00000461383 OR4S1Q8NGB4 309 aa0.8□□□□□ -2.28
VCL-203ENST00000461383 CCL19Q99731 98 aa0.8□□□□□ -2.28
VCL-203ENST00000461383 SLC35B3Q9H1N7 401 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms