RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 ZNF415Q09FC8 603 aa10.01□□□□□ -0.81
SMPD4-216ENST00000461187 MRPL23Q16540 153 aaKnown RBP10.01□□□□□ -0.81
SMPD4-216ENST00000461187 WDR61Q9GZS3 305 aaKnown RBP10.01□□□□□ -0.81
SMPD4-216ENST00000461187 SLC25A31Q9H0C2 315 aa10.01□□□□□ -0.81
SMPD4-216ENST00000461187 OR5AC2Q9NZP5 309 aa10.01□□□□□ -0.81
SMPD4-216ENST00000461187 RBAKDNA6NC62 111 aa10□□□□□ -0.81
SMPD4-216ENST00000461187 E5RGE8 158 aa10□□□□□ -0.81
SMPD4-216ENST00000461187 H0YIZ8 118 aa10□□□□□ -0.81
SMPD4-216ENST00000461187 SIX6O95475 246 aa10□□□□□ -0.81
SMPD4-216ENST00000461187 ZNF266Q14584 549 aa10□□□□□ -0.81
SMPD4-216ENST00000461187 MUC21Q5SSG8 566 aa10□□□□□ -0.81
SMPD4-216ENST00000461187 MZT2BQ6NZ67 158 aa10□□□□□ -0.81
SMPD4-216ENST00000461187 NEGR1Q7Z3B1 354 aa10□□□□□ -0.81
SMPD4-216ENST00000461187 NDUFA13Q9P0J0 144 aa10□□□□□ -0.81
SMPD4-216ENST00000461187 MDFICQ9P1T7 246 aa10□□□□□ -0.81
SMPD4-216ENST00000461187 EREGO14944 169 aa9.99□□□□□ -0.81
SMPD4-216ENST00000461187 ERVFC1-1P60608 527 aa9.99□□□□□ -0.81
SMPD4-216ENST00000461187 ASAH1Q13510 395 aa9.99□□□□□ -0.81
SMPD4-216ENST00000461187 IQCF2Q8IXL9 164 aa9.99□□□□□ -0.81
SMPD4-216ENST00000461187 NMES1Q9C002 83 aa9.99□□□□□ -0.81
SMPD4-216ENST00000461187 KCNIP2Q9NS61 270 aa9.99□□□□□ -0.81
SMPD4-216ENST00000461187 TRGV4A0A0C4DH28 118 aa9.98□□□□□ -0.81
SMPD4-216ENST00000461187 K7EQD1 137 aa9.98□□□□□ -0.81
SMPD4-216ENST00000461187 OR7C2O60412 319 aa9.98□□□□□ -0.81
SMPD4-216ENST00000461187 SFTA3P0C7M3 94 aa9.98□□□□□ -0.81
SMPD4-216ENST00000461187 CSN1S1P47710 185 aa9.98□□□□□ -0.81
SMPD4-216ENST00000461187 RANP62826 216 aaKnown RBP9.98□□□□□ -0.81
SMPD4-216ENST00000461187 LRRC37A5PQ49AS3 106 aa9.98□□□□□ -0.81
SMPD4-216ENST00000461187 Q6AWC8 147 aa9.98□□□□□ -0.81
SMPD4-216ENST00000461187 CDPF1Q6NVV7 123 aa9.98□□□□□ -0.81
SMPD4-216ENST00000461187 NFE4Q86UQ8 179 aa9.98□□□□□ -0.81
SMPD4-216ENST00000461187 LYPD1Q8N2G4 141 aa9.98□□□□□ -0.81
SMPD4-216ENST00000461187 OR10G4Q8NGN3 311 aa9.98□□□□□ -0.81
SMPD4-216ENST00000461187 RASL10AQ92737 203 aa9.98□□□□□ -0.81
SMPD4-216ENST00000461187 ZNF479Q96JC4 524 aa9.98□□□□□ -0.81
SMPD4-216ENST00000461187 EPM2AB3EWF7 344 aa9.97□□□□□ -0.81
SMPD4-216ENST00000461187 DNAH10OSP0CZ25 163 aa9.97□□□□□ -0.81
SMPD4-216ENST00000461187 XGP55808 180 aa9.97□□□□□ -0.81
SMPD4-216ENST00000461187 SPXQ9BT56 116 aa9.97□□□□□ -0.81
SMPD4-216ENST00000461187 LY96Q9Y6Y9 160 aa9.97□□□□□ -0.81
SMPD4-216ENST00000461187 TRAV9-2A0A087WT02 112 aa9.96□□□□□ -0.82
SMPD4-216ENST00000461187 A0A087WTM6 91 aa9.96□□□□□ -0.82
SMPD4-216ENST00000461187 DIRC3C9JPN6 131 aa9.96□□□□□ -0.82
SMPD4-216ENST00000461187 C17orf112F2Z3M2 114 aa9.96□□□□□ -0.82
SMPD4-216ENST00000461187 SRIP30626 198 aa9.96□□□□□ -0.82
SMPD4-216ENST00000461187 TMEM183BQ1AE95 376 aa9.96□□□□□ -0.82
SMPD4-216ENST00000461187 WFDC10BQ8IUB3 73 aa9.96□□□□□ -0.82
SMPD4-216ENST00000461187 TMEM183AQ8IXX5 376 aa9.96□□□□□ -0.82
SMPD4-216ENST00000461187 PTTG2Q9NZH5 202 aa9.96□□□□□ -0.82
SMPD4-216ENST00000461187 LENEPQ9Y5L5 61 aa9.96□□□□□ -0.82
SMPD4-216ENST00000461187 FAT1Q14517 4588 aa9.95□□□□□ -0.82
SMPD4-216ENST00000461187 DMBT1Q9UGM3 2413 aaPredicted RBP9.95□□□□□ -0.82
SMPD4-216ENST00000461187 GYPEP15421 78 aa9.95□□□□□ -0.82
SMPD4-216ENST00000461187 UBE2L3P68036 154 aaKnown RBP9.95□□□□□ -0.82
SMPD4-216ENST00000461187 CYCSP99999 105 aaKnown RBP9.95□□□□□ -0.82
SMPD4-216ENST00000461187 FFAR4Q5NUL3 377 aa9.95□□□□□ -0.82
SMPD4-216ENST00000461187 FAM159AQ6UWV7 190 aa9.95□□□□□ -0.82
SMPD4-216ENST00000461187 LINC00299Q6ZSB3 139 aa9.95□□□□□ -0.82
SMPD4-216ENST00000461187 ENKURQ8TC29 256 aa9.95□□□□□ -0.82
SMPD4-216ENST00000461187 ATP5SQ99766 215 aa9.95□□□□□ -0.82
SMPD4-216ENST00000461187 MSRB1Q9NZV6 116 aa9.95□□□□□ -0.82
SMPD4-216ENST00000461187 VPS13BQ7Z7G8 4022 aa9.95□□□□□ -0.82
SMPD4-216ENST00000461187 FLG2Q5D862 2391 aaPredicted RBP9.94□□□□□ -0.82
SMPD4-216ENST00000461187 TRGV11A0A075B6L2 103 aa9.94□□□□□ -0.82
SMPD4-216ENST00000461187 K7EP13 123 aa9.94□□□□□ -0.82
SMPD4-216ENST00000461187 ORM1P02763 201 aa9.94□□□□□ -0.82
SMPD4-216ENST00000461187 H2BFSP57053 126 aa9.94□□□□□ -0.82
SMPD4-216ENST00000461187 KRTAP10-1P60331 282 aa9.94□□□□□ -0.82
SMPD4-216ENST00000461187 TDRG1Q3Y452 100 aa9.94□□□□□ -0.82
SMPD4-216ENST00000461187 KHDC3LQ587J8 217 aa9.94□□□□□ -0.82
SMPD4-216ENST00000461187 PCNPQ8WW12 178 aaKnown RBP9.94□□□□□ -0.82
SMPD4-216ENST00000461187 TMED6Q8WW62 240 aa9.94□□□□□ -0.82
SMPD4-216ENST00000461187 S100ZQ8WXG8 99 aa9.94□□□□□ -0.82
SMPD4-216ENST00000461187 HERC1Q15751 4861 aa9.94□□□□□ -0.82
SMPD4-216ENST00000461187 TRAV4A0A0B4J268 109 aa9.93□□□□□ -0.82
SMPD4-216ENST00000461187 EVI2AP22794 236 aa9.93□□□□□ -0.82
SMPD4-216ENST00000461187 PPP1R1CQ8WVI7 109 aa9.93□□□□□ -0.82
SMPD4-216ENST00000461187 HYLS1Q96M11 299 aa9.93□□□□□ -0.82
SMPD4-216ENST00000461187 HSPB11Q9Y547 144 aa9.93□□□□□ -0.82
SMPD4-216ENST00000461187 GNRH2O43555 120 aa9.92□□□□□ -0.82
SMPD4-216ENST00000461187 EIF3GO75821 320 aaKnown RBP eCLIP9.92□□□□□ -0.82
SMPD4-216ENST00000461187 TAS2R45P59539 299 aa9.92□□□□□ -0.82
SMPD4-216ENST00000461187 TXNDC17Q9BRA2 123 aa9.92□□□□□ -0.82
SMPD4-216ENST00000461187 OTORQ9NRC9 128 aa9.92□□□□□ -0.82
SMPD4-216ENST00000461187 NAGKQ9UJ70 344 aa9.92□□□□□ -0.82
SMPD4-216ENST00000461187 IGHV3-16A0A0C4DH30 117 aa9.91□□□□□ -0.82
SMPD4-216ENST00000461187 LOC100131303A0A0U1RQF7 123 aa9.91□□□□□ -0.82
SMPD4-216ENST00000461187 PGPA6NDG6 321 aa9.91□□□□□ -0.82
SMPD4-216ENST00000461187 C9JCJ5 164 aa9.91□□□□□ -0.82
SMPD4-216ENST00000461187 INMT-MINDY4F8WBC2 141 aa9.91□□□□□ -0.82
SMPD4-216ENST00000461187 M0R2P5 195 aa9.91□□□□□ -0.82
SMPD4-216ENST00000461187 UPK1BO75841 260 aa9.91□□□□□ -0.82
SMPD4-216ENST00000461187 MPC2O95563 127 aa9.91□□□□□ -0.82
SMPD4-216ENST00000461187 IFNA5P01569 189 aa9.91□□□□□ -0.82
SMPD4-216ENST00000461187 INAFM2P0DMQ5 153 aa9.91□□□□□ -0.82
SMPD4-216ENST00000461187 IFITM3Q01628 133 aa9.91□□□□□ -0.82
SMPD4-216ENST00000461187 OR4C5Q8NGB2 326 aa9.91□□□□□ -0.82
SMPD4-216ENST00000461187 SCGB1C1Q8TD33 95 aa9.91□□□□□ -0.82
SMPD4-216ENST00000461187 TVP23CQ96ET8 276 aa9.91□□□□□ -0.82
SMPD4-216ENST00000461187 SMIM3Q9BZL3 60 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms