RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 TMEM78Q5T7P6 136 aa8.2□□□□□ -1.1
IFT88-204ENST00000461115 Q6ZSV7 163 aa8.2□□□□□ -1.1
IFT88-204ENST00000461115 TMEM256Q8N2U0 113 aa8.2□□□□□ -1.1
IFT88-204ENST00000461115 KLHDC1Q8N7A1 406 aa8.2□□□□□ -1.1
IFT88-204ENST00000461115 OR10D4PQ8NGN7 298 aa8.2□□□□□ -1.1
IFT88-204ENST00000461115 Q8TAT8 98 aa8.2□□□□□ -1.1
IFT88-204ENST00000461115 PGLYRP4Q96LB8 373 aa8.2□□□□□ -1.1
IFT88-204ENST00000461115 ALKBH7Q9BT30 221 aaPredicted RBP8.2□□□□□ -1.1
IFT88-204ENST00000461115 C16orf95Q9H693 158 aa8.2□□□□□ -1.1
IFT88-204ENST00000461115 IGHV4OR15-8A0A075B7B6 117 aa8.2□□□□□ -1.1
IFT88-204ENST00000461115 A0A087WW49 117 aa8.2□□□□□ -1.1
IFT88-204ENST00000461115 NUPR1O60356 82 aa8.2□□□□□ -1.1
IFT88-204ENST00000461115 RNASE1P07998 156 aaKnown RBP8.2□□□□□ -1.1
IFT88-204ENST00000461115 RIGQ13278 110 aa8.2□□□□□ -1.1
IFT88-204ENST00000461115 JOSD1Q15040 202 aaPredicted RBP8.2□□□□□ -1.1
IFT88-204ENST00000461115 TCTEX1D4Q5JR98 221 aa8.2□□□□□ -1.1
IFT88-204ENST00000461115 C18orf32Q8TCD1 76 aa8.2□□□□□ -1.1
IFT88-204ENST00000461115 C4orf3Q8WVX3 66 aa8.2□□□□□ -1.1
IFT88-204ENST00000461115 ESM1Q9NQ30 184 aa8.2□□□□□ -1.1
IFT88-204ENST00000461115 GRIFINA4D1Z8 144 aa8.19□□□□□ -1.1
IFT88-204ENST00000461115 GZMBP10144 247 aa8.19□□□□□ -1.1
IFT88-204ENST00000461115 SRIP30626 198 aa8.19□□□□□ -1.1
IFT88-204ENST00000461115 HOXD3P31249 432 aaPredicted RBP8.19□□□□□ -1.1
IFT88-204ENST00000461115 RAB4BP61018 213 aa8.19□□□□□ -1.1
IFT88-204ENST00000461115 ODF3Q96PU9 254 aa8.19□□□□□ -1.1
IFT88-204ENST00000461115 LOC102724200A0A096LPH7 203 aaPredicted RBP8.18□□□□□ -1.1
IFT88-204ENST00000461115 TRAV2A0A0B4J234 112 aa8.18□□□□□ -1.1
IFT88-204ENST00000461115 SERF1AO75920 110 aa8.18□□□□□ -1.1
IFT88-204ENST00000461115 ARMS2P0C7Q2 107 aa8.18□□□□□ -1.1
IFT88-204ENST00000461115 CAMPP49913 170 aa8.18□□□□□ -1.1
IFT88-204ENST00000461115 S100A12P80511 92 aa8.18□□□□□ -1.1
IFT88-204ENST00000461115 PDZD11Q5EBL8 140 aa8.18□□□□□ -1.1
IFT88-204ENST00000461115 ZFAND2AQ8N6M9 145 aa8.18□□□□□ -1.1
IFT88-204ENST00000461115 OR8A1Q8NGG7 326 aa8.18□□□□□ -1.1
IFT88-204ENST00000461115 FASNP49327 2511 aaKnown RBP8.18□□□□□ -1.1
IFT88-204ENST00000461115 GCN1Q92616 2671 aaKnown RBP8.18□□□□□ -1.1
IFT88-204ENST00000461115 IGKV3D-20A0A0C4DH25 116 aa8.17□□□□□ -1.1
IFT88-204ENST00000461115 A0A1B0GUS0 222 aa8.17□□□□□ -1.1
IFT88-204ENST00000461115 C2orf70A6NJV1 201 aa8.17□□□□□ -1.1
IFT88-204ENST00000461115 F2Z2F3 143 aa8.17□□□□□ -1.1
IFT88-204ENST00000461115 K7EQG2 157 aa8.17□□□□□ -1.1
IFT88-204ENST00000461115 ID1P41134 155 aa8.17□□□□□ -1.1
IFT88-204ENST00000461115 KIAA1644Q3SXP7 199 aa8.17□□□□□ -1.1
IFT88-204ENST00000461115 LYZL1Q6UWQ5 148 aa8.17□□□□□ -1.1
IFT88-204ENST00000461115 ADAMTSL5Q6ZMM2 481 aa8.17□□□□□ -1.1
IFT88-204ENST00000461115 ZNF738Q8NE65 137 aa8.17□□□□□ -1.1
IFT88-204ENST00000461115 YAE1D1Q9NRH1 226 aa8.17□□□□□ -1.1
IFT88-204ENST00000461115 C11orf21Q9P2W6 132 aa8.17□□□□□ -1.1
IFT88-204ENST00000461115 U3KQK5 164 aa8.17□□□□□ -1.1
IFT88-204ENST00000461115 IGHV4-4A0A075B6R2 117 aa8.16□□□□□ -1.1
IFT88-204ENST00000461115 LINC01619G3V211 115 aa8.16□□□□□ -1.1
IFT88-204ENST00000461115 GPX1P07203 203 aa8.16□□□□□ -1.1
IFT88-204ENST00000461115 PRB4P10163 310 aaPredicted RBP8.16□□□□□ -1.1
IFT88-204ENST00000461115 EDN2P20800 178 aa8.16□□□□□ -1.1
IFT88-204ENST00000461115 BAGE3Q86Y29 109 aa8.16□□□□□ -1.1
IFT88-204ENST00000461115 FER1L6-AS1Q8NA97 138 aa8.16□□□□□ -1.1
IFT88-204ENST00000461115 OR10J6PQ8NGY7 276 aa8.16□□□□□ -1.1
IFT88-204ENST00000461115 KCNS1Q96KK3 526 aa8.16□□□□□ -1.1
IFT88-204ENST00000461115 MS4A6AQ9H2W1 248 aa8.16□□□□□ -1.1
IFT88-204ENST00000461115 KLLNB2CW77 178 aa8.15□□□□□ -1.1
IFT88-204ENST00000461115 SNAI2O43623 268 aa8.15□□□□□ -1.1
IFT88-204ENST00000461115 OR5AL1P0C617 328 aa8.15□□□□□ -1.1
IFT88-204ENST00000461115 SYNJ2BPP57105 145 aa8.15□□□□□ -1.1
IFT88-204ENST00000461115 HILS1P60008 231 aa8.15□□□□□ -1.1
IFT88-204ENST00000461115 FHL3Q13643 280 aa8.15□□□□□ -1.1
IFT88-204ENST00000461115 BORCS7Q96B45 105 aa8.15□□□□□ -1.1
IFT88-204ENST00000461115 RCHY1Q96PM5 261 aa8.15□□□□□ -1.1
IFT88-204ENST00000461115 DUX5Q96PT3 197 aa8.15□□□□□ -1.1
IFT88-204ENST00000461115 NIT2Q9NQR4 276 aa8.15□□□□□ -1.1
IFT88-204ENST00000461115 A8MTW9 85 aa8.14□□□□□ -1.11
IFT88-204ENST00000461115 NDUFA7O95182 113 aa8.14□□□□□ -1.11
IFT88-204ENST00000461115 MED14OSP0DP75 135 aa8.14□□□□□ -1.11
IFT88-204ENST00000461115 PRR9Q5T870 116 aa8.14□□□□□ -1.11
IFT88-204ENST00000461115 FAM104BQ5XKR9 115 aa8.14□□□□□ -1.11
IFT88-204ENST00000461115 URB1-AS1Q96HZ7 61 aa8.14□□□□□ -1.11
IFT88-204ENST00000461115 TMEM191AQ9H0A3 160 aa8.14□□□□□ -1.11
IFT88-204ENST00000461115 MTORP42345 2549 aa8.14□□□□□ -1.11
IFT88-204ENST00000461115 SORL1Q92673 2214 aa8.14□□□□□ -1.11
IFT88-204ENST00000461115 TRAV21A0A0B4J279 112 aa8.13□□□□□ -1.11
IFT88-204ENST00000461115 ZNF324O75467 553 aaPredicted RBP8.13□□□□□ -1.11
IFT88-204ENST00000461115 ORM1P02763 201 aa8.13□□□□□ -1.11
IFT88-204ENST00000461115 C18orf65Q6ZTR6 163 aa8.13□□□□□ -1.11
IFT88-204ENST00000461115 OR1N2Q8NGR9 330 aa8.13□□□□□ -1.11
IFT88-204ENST00000461115 PEMTQ9UBM1 199 aa8.13□□□□□ -1.11
IFT88-204ENST00000461115 HIVEP2P31629 2446 aa8.13□□□□□ -1.11
IFT88-204ENST00000461115 A0A0J9YX75 114 aa8.12□□□□□ -1.11
IFT88-204ENST00000461115 M0QZ24 198 aa8.12□□□□□ -1.11
IFT88-204ENST00000461115 RPL11P62913 178 aaKnown RBP8.12□□□□□ -1.11
IFT88-204ENST00000461115 OR11H1Q8NG94 326 aa8.12□□□□□ -1.11
IFT88-204ENST00000461115 OR9G4Q8NGQ1 327 aa8.12□□□□□ -1.11
IFT88-204ENST00000461115 LINC01006Q8NI28 216 aa8.12□□□□□ -1.11
IFT88-204ENST00000461115 ZNF418Q8TF45 676 aaPredicted RBP8.12□□□□□ -1.11
IFT88-204ENST00000461115 CHCHD1Q96BP2 118 aaKnown RBP8.12□□□□□ -1.11
IFT88-204ENST00000461115 SIGLEC8Q9NYZ4 499 aa8.12□□□□□ -1.11
IFT88-204ENST00000461115 TMSB15BA0A087X1C1 80 aa8.12□□□□□ -1.11
IFT88-204ENST00000461115 CSN3P07498 182 aa8.12□□□□□ -1.11
IFT88-204ENST00000461115 NTF3P20783 257 aa8.12□□□□□ -1.11
IFT88-204ENST00000461115 SLURP1P55000 103 aa8.12□□□□□ -1.11
IFT88-204ENST00000461115 SNRPD3P62318 126 aaKnown RBP8.12□□□□□ -1.11
IFT88-204ENST00000461115 Q6ZWC4 215 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms