RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 TRAV21A0A0B4J279 112 aa9.11□□□□□ -0.95
NPHP4-204ENST00000460696 PRSS57Q6UWY2 283 aa9.11□□□□□ -0.95
NPHP4-204ENST00000460696 TTC9CQ8N5M4 171 aa9.11□□□□□ -0.95
NPHP4-204ENST00000460696 STPG4Q8N801 248 aa9.11□□□□□ -0.95
NPHP4-204ENST00000460696 SCGB3A1Q96QR1 104 aa9.11□□□□□ -0.95
NPHP4-204ENST00000460696 IGHV3OR16-12A0A075B7B8 117 aa9.11□□□□□ -0.95
NPHP4-204ENST00000460696 KIR2DL5BA0A0G2JN68 375 aa9.11□□□□□ -0.95
NPHP4-204ENST00000460696 KIR2DL5BA0A0G2JPC4 375 aa9.11□□□□□ -0.95
NPHP4-204ENST00000460696 OVOL3O00110 214 aa9.11□□□□□ -0.95
NPHP4-204ENST00000460696 CTSGP08311 255 aa9.11□□□□□ -0.95
NPHP4-204ENST00000460696 CD7P09564 240 aa9.11□□□□□ -0.95
NPHP4-204ENST00000460696 KIR2DL5AQ8N109 375 aa9.11□□□□□ -0.95
NPHP4-204ENST00000460696 WIPF2Q8TF74 440 aaPredicted RBP9.11□□□□□ -0.95
NPHP4-204ENST00000460696 HIST1H4GQ99525 98 aa9.11□□□□□ -0.95
NPHP4-204ENST00000460696 NAA38Q9BRA0 125 aaKnown RBP9.11□□□□□ -0.95
NPHP4-204ENST00000460696 TNRC6BQ9UPQ9 1833 aaKnown RBP9.11□□□□□ -0.95
NPHP4-204ENST00000460696 ATP5LO75964 103 aa9.11□□□□□ -0.95
NPHP4-204ENST00000460696 ZNF688P0C7X2 276 aa9.11□□□□□ -0.95
NPHP4-204ENST00000460696 NBEAQ8NFP9 2946 aa9.1□□□□□ -0.95
NPHP4-204ENST00000460696 DEFB113Q30KQ7 82 aa9.1□□□□□ -0.95
NPHP4-204ENST00000460696 MRPL51Q4U2R6 128 aaKnown RBP9.1□□□□□ -0.95
NPHP4-204ENST00000460696 KLF12Q9Y4X4 402 aa9.1□□□□□ -0.95
NPHP4-204ENST00000460696 FLNAP21333 2647 aaKnown RBP9.1□□□□□ -0.95
NPHP4-204ENST00000460696 IGHV4-30-2A0A087WSY4 118 aa9.1□□□□□ -0.95
NPHP4-204ENST00000460696 IGHV1-69DA0A0B4J2H0 117 aa9.1□□□□□ -0.95
NPHP4-204ENST00000460696 IGHV1-69P01742 117 aa9.1□□□□□ -0.95
NPHP4-204ENST00000460696 EGR2P11161 476 aaPredicted RBP9.1□□□□□ -0.95
NPHP4-204ENST00000460696 DGAT2L7PQ6IED9 249 aa9.1□□□□□ -0.95
NPHP4-204ENST00000460696 FANCD2OSQ96PS1 177 aa9.1□□□□□ -0.95
NPHP4-204ENST00000460696 SCGB1C2P0DMR2 95 aa9.1□□□□□ -0.95
NPHP4-204ENST00000460696 FBXL19-AS1Q494R0 122 aa9.1□□□□□ -0.95
NPHP4-204ENST00000460696 NPBQ8NG41 125 aa9.1□□□□□ -0.95
NPHP4-204ENST00000460696 RHPN1-AS1Q9BWJ2 59 aa9.1□□□□□ -0.95
NPHP4-204ENST00000460696 STAB1Q9NY15 2570 aa9.1□□□□□ -0.95
NPHP4-204ENST00000460696 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.09□□□□□ -0.95
NPHP4-204ENST00000460696 FCN3O75636 299 aa9.09□□□□□ -0.95
NPHP4-204ENST00000460696 HERVK_113P61574 105 aa9.09□□□□□ -0.95
NPHP4-204ENST00000460696 C1orf122Q6ZSJ8 110 aa9.09□□□□□ -0.95
NPHP4-204ENST00000460696 C8orf86Q6ZUL3 223 aa9.09□□□□□ -0.95
NPHP4-204ENST00000460696 DYNAPQ8N1N2 210 aa9.09□□□□□ -0.95
NPHP4-204ENST00000460696 Q8N9W7 124 aa9.09□□□□□ -0.95
NPHP4-204ENST00000460696 TP53TG3Q9ULZ0 132 aa9.09□□□□□ -0.95
NPHP4-204ENST00000460696 ZNF256Q9Y2P7 627 aaPredicted RBP9.09□□□□□ -0.95
NPHP4-204ENST00000460696 OR11H12B2RN74 326 aa9.09□□□□□ -0.95
NPHP4-204ENST00000460696 B4DSR2 109 aa9.09□□□□□ -0.95
NPHP4-204ENST00000460696 Q1RN00 199 aa9.09□□□□□ -0.95
NPHP4-204ENST00000460696 GDF5OSQ5U4N7 250 aa9.09□□□□□ -0.95
NPHP4-204ENST00000460696 C9orf139Q6ZV77 190 aa9.09□□□□□ -0.95
NPHP4-204ENST00000460696 C14orf178Q8N769 122 aaPredicted RBP9.09□□□□□ -0.95
NPHP4-204ENST00000460696 OR11H1Q8NG94 326 aa9.09□□□□□ -0.95
NPHP4-204ENST00000460696 OR11H2Q8NH07 326 aa9.09□□□□□ -0.95
NPHP4-204ENST00000460696 KIR2DL4Q99706 377 aa9.09□□□□□ -0.95
NPHP4-204ENST00000460696 PSMG4Q5JS54 123 aa9.09□□□□□ -0.95
NPHP4-204ENST00000460696 BCL6BQ8N143 479 aaPredicted RBP9.09□□□□□ -0.95
NPHP4-204ENST00000460696 KALRNO60229 2985 aa9.08□□□□□ -0.96
NPHP4-204ENST00000460696 TMEM158Q8WZ71 300 aa9.08□□□□□ -0.96
NPHP4-204ENST00000460696 SIGLEC8Q9NYZ4 499 aa9.08□□□□□ -0.96
NPHP4-204ENST00000460696 PEF1Q9UBV8 284 aaKnown RBP9.08□□□□□ -0.96
NPHP4-204ENST00000460696 CENPVL3A0A0U1RRI6 287 aa9.08□□□□□ -0.96
NPHP4-204ENST00000460696 SPRY2O43597 315 aa9.08□□□□□ -0.96
NPHP4-204ENST00000460696 NPYP01303 97 aa9.08□□□□□ -0.96
NPHP4-204ENST00000460696 SRSF2Q01130 221 aaKnown RBP9.08□□□□□ -0.96
NPHP4-204ENST00000460696 Q6ZVH6 145 aa9.08□□□□□ -0.96
NPHP4-204ENST00000460696 TNFRSF6BO95407 300 aa9.08□□□□□ -0.96
NPHP4-204ENST00000460696 GTSCR1Q86UQ5 136 aa9.08□□□□□ -0.96
NPHP4-204ENST00000460696 SYT8Q8NBV8 401 aa9.08□□□□□ -0.96
NPHP4-204ENST00000460696 MS4A6AQ9H2W1 248 aa9.08□□□□□ -0.96
NPHP4-204ENST00000460696 MSRB1Q9NZV6 116 aa9.08□□□□□ -0.96
NPHP4-204ENST00000460696 H3BUT2 72 aa9.07□□□□□ -0.96
NPHP4-204ENST00000460696 OVOL1O14753 267 aa9.07□□□□□ -0.96
NPHP4-204ENST00000460696 MSMBP08118 114 aa9.07□□□□□ -0.96
NPHP4-204ENST00000460696 FABP2P12104 132 aa9.07□□□□□ -0.96
NPHP4-204ENST00000460696 OR1N2Q8NGR9 330 aa9.07□□□□□ -0.96
NPHP4-204ENST00000460696 IGHV4-61A0A0C4DH41 118 aa9.07□□□□□ -0.96
NPHP4-204ENST00000460696 PSMB11A5LHX3 300 aa9.07□□□□□ -0.96
NPHP4-204ENST00000460696 SRSF1Q07955 248 aaKnown RBP eCLIP9.07□□□□□ -0.96
NPHP4-204ENST00000460696 IGHV4-39P01824 125 aa9.07□□□□□ -0.96
NPHP4-204ENST00000460696 NPSP0C0P6 89 aa9.07□□□□□ -0.96
NPHP4-204ENST00000460696 AGPAT4-IT1Q9H0P7 198 aa9.07□□□□□ -0.96
NPHP4-204ENST00000460696 TRAV26-2A0A0B4J265 109 aa9.06□□□□□ -0.96
NPHP4-204ENST00000460696 TRAV12-3A0A0B4J271 114 aa9.06□□□□□ -0.96
NPHP4-204ENST00000460696 KLF5Q13887 457 aaPredicted RBP9.06□□□□□ -0.96
NPHP4-204ENST00000460696 TMEM170BQ5T4T1 132 aa9.06□□□□□ -0.96
NPHP4-204ENST00000460696 TMEM190Q8WZ59 177 aa9.06□□□□□ -0.96
NPHP4-204ENST00000460696 BEX4Q9NWD9 120 aaPredicted RBP9.06□□□□□ -0.96
NPHP4-204ENST00000460696 PRAC2D3DTV9 90 aa9.06□□□□□ -0.96
NPHP4-204ENST00000460696 DPM2O94777 84 aa9.06□□□□□ -0.96
NPHP4-204ENST00000460696 CRYGBP07316 175 aa9.06□□□□□ -0.96
NPHP4-204ENST00000460696 K7ERU9 68 aa9.06□□□□□ -0.96
NPHP4-204ENST00000460696 AMMECR1LQ6DCA0 310 aa9.06□□□□□ -0.96
NPHP4-204ENST00000460696 LY6G5BQ8NDX9 201 aa9.06□□□□□ -0.96
NPHP4-204ENST00000460696 C19orf71A6NCJ1 209 aa9.05□□□□□ -0.96
NPHP4-204ENST00000460696 FAM223BA6NKX1 122 aa9.05□□□□□ -0.96
NPHP4-204ENST00000460696 LINC01548A6NM66 108 aa9.05□□□□□ -0.96
NPHP4-204ENST00000460696 J3QR89 54 aa9.05□□□□□ -0.96
NPHP4-204ENST00000460696 FAM223AQ8IWN6 122 aa9.05□□□□□ -0.96
NPHP4-204ENST00000460696 CFHR4Q92496 578 aa9.05□□□□□ -0.96
NPHP4-204ENST00000460696 MLST8Q9BVC4 326 aa9.05□□□□□ -0.96
NPHP4-204ENST00000460696 MRPS16Q9Y3D3 137 aaKnown RBP9.05□□□□□ -0.96
NPHP4-204ENST00000460696 F6UB75 175 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms