RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 C7orf69Q9H7B7 122 aa12.06□□□□□ -0.48
LMNB1-203ENST00000460265 TRBV19A0A075B6N1 114 aa12.06□□□□□ -0.48
LMNB1-203ENST00000460265 K7ERJ3 54 aa12.06□□□□□ -0.48
LMNB1-203ENST00000460265 C8orf49Q96NF6 230 aa12.06□□□□□ -0.48
LMNB1-203ENST00000460265 MRPL16Q9NX20 251 aaKnown RBP12.06□□□□□ -0.48
LMNB1-203ENST00000460265 LINC01548A6NM66 108 aa12.06□□□□□ -0.48
LMNB1-203ENST00000460265 PCP2Q8IVA1 136 aa12.06□□□□□ -0.48
LMNB1-203ENST00000460265 NHP2Q9NX24 153 aaKnown RBP12.06□□□□□ -0.48
LMNB1-203ENST00000460265 ANKRD17O75179 2603 aaKnown RBP12.05□□□□□ -0.48
LMNB1-203ENST00000460265 Q86TA4 180 aa12.05□□□□□ -0.48
LMNB1-203ENST00000460265 LY6G5BQ8NDX9 201 aa12.05□□□□□ -0.48
LMNB1-203ENST00000460265 CACNG7P62955 275 aa12.05□□□□□ -0.48
LMNB1-203ENST00000460265 BOD1L2Q8IYS8 172 aa12.05□□□□□ -0.48
LMNB1-203ENST00000460265 HIF1ANQ9NWT6 349 aa12.05□□□□□ -0.48
LMNB1-203ENST00000460265 MTORP42345 2549 aa12.05□□□□□ -0.48
LMNB1-203ENST00000460265 A0A1B0GXF2 115 aa12.05□□□□□ -0.48
LMNB1-203ENST00000460265 LY6LH3BQJ8 138 aa12.05□□□□□ -0.48
LMNB1-203ENST00000460265 FGF6P10767 208 aa12.05□□□□□ -0.48
LMNB1-203ENST00000460265 RIGQ13278 110 aa12.05□□□□□ -0.48
LMNB1-203ENST00000460265 ITLN2Q8WWU7 325 aaPredicted RBP12.05□□□□□ -0.48
LMNB1-203ENST00000460265 CFHR4Q92496 578 aa12.05□□□□□ -0.48
LMNB1-203ENST00000460265 SPANXB1Q9NS25 103 aaPredicted RBP12.05□□□□□ -0.48
LMNB1-203ENST00000460265 A0A1B0GUT8 65 aa12.04□□□□□ -0.48
LMNB1-203ENST00000460265 H3BMG7 143 aa12.04□□□□□ -0.48
LMNB1-203ENST00000460265 TRGV3P03979 118 aa12.04□□□□□ -0.48
LMNB1-203ENST00000460265 SPINK8P0C7L1 97 aa12.04□□□□□ -0.48
LMNB1-203ENST00000460265 TWIST1Q15672 202 aa12.04□□□□□ -0.48
LMNB1-203ENST00000460265 CRYBG3Q68DQ2 2970 aa12.04□□□□□ -0.48
LMNB1-203ENST00000460265 FANCD2OSQ96PS1 177 aa12.04□□□□□ -0.48
LMNB1-203ENST00000460265 SPATA25Q9BR10 227 aa12.04□□□□□ -0.48
LMNB1-203ENST00000460265 HRNRQ86YZ3 2850 aaPredicted RBP12.04□□□□□ -0.48
LMNB1-203ENST00000460265 NPFFO15130 113 aa12.04□□□□□ -0.48
LMNB1-203ENST00000460265 ARMS2P0C7Q2 107 aa12.04□□□□□ -0.48
LMNB1-203ENST00000460265 FXYD7P58549 80 aa12.04□□□□□ -0.48
LMNB1-203ENST00000460265 RNF182Q8N6D2 247 aa12.04□□□□□ -0.48
LMNB1-203ENST00000460265 C2CD3Q4AC94 2353 aa12.04□□□□□ -0.48
LMNB1-203ENST00000460265 IGHV7-81A0A0B4J1V7 117 aa12.03□□□□□ -0.48
LMNB1-203ENST00000460265 LCNL1Q6ZST4 164 aa12.03□□□□□ -0.48
LMNB1-203ENST00000460265 F8W1H4 67 aa12.03□□□□□ -0.48
LMNB1-203ENST00000460265 MINOS1Q5TGZ0 78 aa12.03□□□□□ -0.48
LMNB1-203ENST00000460265 WFDC3Q8IUB2 231 aa12.03□□□□□ -0.48
LMNB1-203ENST00000460265 MINOS1-NBL1R4GNA1 71 aa12.03□□□□□ -0.48
LMNB1-203ENST00000460265 A0A1B0GWB2 263 aa12.03□□□□□ -0.48
LMNB1-203ENST00000460265 AMTNQ6UX39 209 aa12.03□□□□□ -0.48
LMNB1-203ENST00000460265 PIMREGQ9BSJ6 248 aa12.03□□□□□ -0.48
LMNB1-203ENST00000460265 A6NJY4 79 aa12.02□□□□□ -0.48
LMNB1-203ENST00000460265 FXYD2P54710 66 aa12.02□□□□□ -0.48
LMNB1-203ENST00000460265 K7EMI3 77 aa12.02□□□□□ -0.49
LMNB1-203ENST00000460265 UBE2E1P51965 193 aa12.02□□□□□ -0.49
LMNB1-203ENST00000460265 ERCC8Q13216 396 aa12.02□□□□□ -0.49
LMNB1-203ENST00000460265 C11orf71Q6IPW1 123 aa12.02□□□□□ -0.49
LMNB1-203ENST00000460265 GTSF1Q8WW33 167 aa12.02□□□□□ -0.49
LMNB1-203ENST00000460265 CFAP46Q8IYW2 2715 aa12.02□□□□□ -0.49
LMNB1-203ENST00000460265 ACANP16112 2415 aa12.01□□□□□ -0.49
LMNB1-203ENST00000460265 INSL3P51460 131 aa12.01□□□□□ -0.49
LMNB1-203ENST00000460265 ZNF414Q96IQ9 312 aa12.01□□□□□ -0.49
LMNB1-203ENST00000460265 SOX21Q9Y651 276 aaPredicted RBP12.01□□□□□ -0.49
LMNB1-203ENST00000460265 H3BRN7 92 aa12.01□□□□□ -0.49
LMNB1-203ENST00000460265 PRB1P04280 392 aa12.01□□□□□ -0.49
LMNB1-203ENST00000460265 FCER1GP30273 86 aa12.01□□□□□ -0.49
LMNB1-203ENST00000460265 GAGE13Q4V321 117 aa12.01□□□□□ -0.49
LMNB1-203ENST00000460265 TMEM75Q8N9X5 138 aa12.01□□□□□ -0.49
LMNB1-203ENST00000460265 BSNQ9UPA5 3926 aa12.01□□□□□ -0.49
LMNB1-203ENST00000460265 DTX2Q86UW9 622 aa12.01□□□□□ -0.49
LMNB1-203ENST00000460265 Q8N9W7 124 aa12.01□□□□□ -0.49
LMNB1-203ENST00000460265 C16orf92Q96LL3 132 aa12.01□□□□□ -0.49
LMNB1-203ENST00000460265 METTL26Q96S19 204 aa12.01□□□□□ -0.49
LMNB1-203ENST00000460265 C20orf78Q9BR46 151 aa12.01□□□□□ -0.49
LMNB1-203ENST00000460265 IGLV11-55A0A075B6I3 123 aa12□□□□□ -0.49
LMNB1-203ENST00000460265 IGHV4-39P01824 125 aa12□□□□□ -0.49
LMNB1-203ENST00000460265 SRD5A1P18405 259 aa12□□□□□ -0.49
LMNB1-203ENST00000460265 GATA3P23771 443 aa12□□□□□ -0.49
LMNB1-203ENST00000460265 NPBQ8NG41 125 aa12□□□□□ -0.49
LMNB1-203ENST00000460265 RNF183Q96D59 192 aa12□□□□□ -0.49
LMNB1-203ENST00000460265 CYSLTR1Q9Y271 337 aa12□□□□□ -0.49
LMNB1-203ENST00000460265 H3BUX3 64 aa12□□□□□ -0.49
LMNB1-203ENST00000460265 LTAP01374 205 aa12□□□□□ -0.49
LMNB1-203ENST00000460265 CTSGP08311 255 aa12□□□□□ -0.49
LMNB1-203ENST00000460265 PIP4P2Q8N4L2 257 aa12□□□□□ -0.49
LMNB1-203ENST00000460265 ZNF479Q96JC4 524 aa12□□□□□ -0.49
LMNB1-203ENST00000460265 UFC1Q9Y3C8 167 aa12□□□□□ -0.49
LMNB1-203ENST00000460265 IGHV4-61A0A0C4DH41 118 aa11.99□□□□□ -0.49
LMNB1-203ENST00000460265 SIVA1O15304 175 aa11.99□□□□□ -0.49
LMNB1-203ENST00000460265 FOXI2Q6ZQN5 318 aa11.99□□□□□ -0.49
LMNB1-203ENST00000460265 EEF1AKMT3Q96AZ1 226 aa11.99□□□□□ -0.49
LMNB1-203ENST00000460265 LYZL1Q6UWQ5 148 aa11.99□□□□□ -0.49
LMNB1-203ENST00000460265 SIGLEC15Q6ZMC9 328 aa11.99□□□□□ -0.49
LMNB1-203ENST00000460265 SYT8Q8NBV8 401 aa11.99□□□□□ -0.49
LMNB1-203ENST00000460265 ZNF418Q8TF45 676 aaPredicted RBP11.99□□□□□ -0.49
LMNB1-203ENST00000460265 TMEM213A2RRL7 107 aa11.98□□□□□ -0.49
LMNB1-203ENST00000460265 NDUFA3O95167 84 aa11.98□□□□□ -0.49
LMNB1-203ENST00000460265 APOMO95445 188 aa11.98□□□□□ -0.49
LMNB1-203ENST00000460265 SHISA2Q6UWI4 295 aa11.98□□□□□ -0.49
LMNB1-203ENST00000460265 ANAPC13Q9BS18 74 aa11.98□□□□□ -0.49
LMNB1-203ENST00000460265 IGSF10Q6WRI0 2623 aa11.98□□□□□ -0.49
LMNB1-203ENST00000460265 CKS2P33552 79 aa11.98□□□□□ -0.49
LMNB1-203ENST00000460265 LMO4P61968 165 aa11.98□□□□□ -0.49
LMNB1-203ENST00000460265 C8orf86Q6ZUL3 223 aa11.98□□□□□ -0.49
LMNB1-203ENST00000460265 GLMPQ8WWB7 406 aa11.98□□□□□ -0.49
LMNB1-203ENST00000460265 SRSF8Q9BRL6 282 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms