RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 KIR3DS1Q14943 382 aa6.81□□□□□ -1.32
HDAC3-202ENST00000459727 VAMP3Q15836 100 aa6.81□□□□□ -1.32
HDAC3-202ENST00000459727 MPV17L2Q567V2 206 aa6.81□□□□□ -1.32
HDAC3-202ENST00000459727 CLEC2AQ6UVW9 174 aa6.81□□□□□ -1.32
HDAC3-202ENST00000459727 BOD1L2Q8IYS8 172 aa6.81□□□□□ -1.32
HDAC3-202ENST00000459727 BCL6BQ8N143 479 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-202ENST00000459727 OR4C5Q8NGB2 326 aa6.81□□□□□ -1.32
HDAC3-202ENST00000459727 GLMPQ8WWB7 406 aa6.81□□□□□ -1.32
HDAC3-202ENST00000459727 RNF185Q96GF1 192 aa6.81□□□□□ -1.32
HDAC3-202ENST00000459727 AP1S3Q96PC3 154 aa6.81□□□□□ -1.32
HDAC3-202ENST00000459727 BBC3Q96PG8 261 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-202ENST00000459727 AGPAT4-IT1Q9H0P7 198 aa6.81□□□□□ -1.32
HDAC3-202ENST00000459727 TEP1Q99973 2627 aaKnown RBP6.81□□□□□ -1.32
HDAC3-202ENST00000459727 ICE1Q9Y2F5 2266 aa6.8□□□□□ -1.32
HDAC3-202ENST00000459727 A1L4Q6 167 aa6.8□□□□□ -1.32
HDAC3-202ENST00000459727 SMAD7O15105 426 aaKnown RBP6.8□□□□□ -1.32
HDAC3-202ENST00000459727 UBR5O95071 2799 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-202ENST00000459727 TMEM97Q5BJF2 176 aa6.8□□□□□ -1.32
HDAC3-202ENST00000459727 SPANXN1Q5VSR9 72 aa6.8□□□□□ -1.32
HDAC3-202ENST00000459727 PIP4P2Q8N4L2 257 aa6.8□□□□□ -1.32
HDAC3-202ENST00000459727 OR2K2Q8NGT1 345 aa6.8□□□□□ -1.32
HDAC3-202ENST00000459727 TIMM8BQ9Y5J9 83 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-202ENST00000459727 FLNCQ14315 2725 aa6.8□□□□□ -1.32
HDAC3-202ENST00000459727 TRAV8-2A0A0B4J237 113 aa6.79□□□□□ -1.32
HDAC3-202ENST00000459727 A0A1W2PPR1 153 aa6.79□□□□□ -1.32
HDAC3-202ENST00000459727 TMEM89A2RUT3 159 aa6.79□□□□□ -1.32
HDAC3-202ENST00000459727 C7orf71A4D174 169 aa6.79□□□□□ -1.32
HDAC3-202ENST00000459727 K7EP13 123 aa6.79□□□□□ -1.32
HDAC3-202ENST00000459727 M0R381 172 aa6.79□□□□□ -1.32
HDAC3-202ENST00000459727 NDUFS7O75251 213 aa6.79□□□□□ -1.32
HDAC3-202ENST00000459727 IGHG2P01859 326 aa6.79□□□□□ -1.32
HDAC3-202ENST00000459727 SRSF1Q07955 248 aaKnown RBP eCLIP6.79□□□□□ -1.32
HDAC3-202ENST00000459727 ERCC8Q13216 396 aa6.79□□□□□ -1.32
HDAC3-202ENST00000459727 ORMDL2Q53FV1 153 aa6.79□□□□□ -1.32
HDAC3-202ENST00000459727 PRSS57Q6UWY2 283 aa6.79□□□□□ -1.32
HDAC3-202ENST00000459727 GTF2H5Q6ZYL4 71 aa6.79□□□□□ -1.32
HDAC3-202ENST00000459727 MYOZ3Q8TDC0 251 aa6.79□□□□□ -1.32
HDAC3-202ENST00000459727 CCL19Q99731 98 aa6.79□□□□□ -1.32
HDAC3-202ENST00000459727 C20orf78Q9BR46 151 aa6.79□□□□□ -1.32
HDAC3-202ENST00000459727 HIGD1BQ9P298 99 aa6.79□□□□□ -1.32
HDAC3-202ENST00000459727 MYO9AB2RTY4 2548 aa6.78□□□□□ -1.32
HDAC3-202ENST00000459727 IGKV3D-20A0A0C4DH25 116 aa6.78□□□□□ -1.32
HDAC3-202ENST00000459727 G3V318 75 aa6.78□□□□□ -1.32
HDAC3-202ENST00000459727 H3BRM9 83 aa6.78□□□□□ -1.32
HDAC3-202ENST00000459727 K7EMT4 169 aa6.78□□□□□ -1.32
HDAC3-202ENST00000459727 DPM2O94777 84 aa6.78□□□□□ -1.32
HDAC3-202ENST00000459727 IGHV4-39P01824 125 aa6.78□□□□□ -1.32
HDAC3-202ENST00000459727 EVI2AP22794 236 aa6.78□□□□□ -1.32
HDAC3-202ENST00000459727 PLNP26678 52 aa6.78□□□□□ -1.32
HDAC3-202ENST00000459727 HLA-DMBP28068 263 aa6.78□□□□□ -1.32
HDAC3-202ENST00000459727 ID1P41134 155 aa6.78□□□□□ -1.32
HDAC3-202ENST00000459727 LEPP41159 167 aa6.78□□□□□ -1.32
HDAC3-202ENST00000459727 ASIPP42127 132 aa6.78□□□□□ -1.32
HDAC3-202ENST00000459727 LAGE3Q14657 143 aa6.78□□□□□ -1.32
HDAC3-202ENST00000459727 C2orf91Q6ZV80 131 aa6.78□□□□□ -1.32
HDAC3-202ENST00000459727 Q71RC1 249 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-202ENST00000459727 APRG1Q8IVJ8 170 aa6.78□□□□□ -1.32
HDAC3-202ENST00000459727 RNF182Q8N6D2 247 aa6.78□□□□□ -1.32
HDAC3-202ENST00000459727 C10orf105Q8TEF2 133 aa6.78□□□□□ -1.32
HDAC3-202ENST00000459727 ZMAT4Q9H898 229 aa6.78□□□□□ -1.32
HDAC3-202ENST00000459727 TRAV40A0A0B4J280 105 aa6.77□□□□□ -1.33
HDAC3-202ENST00000459727 IGHV3-35A0A0C4DH35 117 aa6.77□□□□□ -1.33
HDAC3-202ENST00000459727 MUC21A0A0G2JKD1 596 aa6.77□□□□□ -1.33
HDAC3-202ENST00000459727 IGHV7-4-1A0A0J9YVY3 117 aa6.77□□□□□ -1.33
HDAC3-202ENST00000459727 MUC21A0A140T8X8 626 aa6.77□□□□□ -1.33
HDAC3-202ENST00000459727 A6NDX4 124 aa6.77□□□□□ -1.33
HDAC3-202ENST00000459727 PRAC2D3DTV9 90 aa6.77□□□□□ -1.33
HDAC3-202ENST00000459727 TAX1BP3O14907 124 aa6.77□□□□□ -1.33
HDAC3-202ENST00000459727 NCR2O95944 276 aa6.77□□□□□ -1.33
HDAC3-202ENST00000459727 IGKCP01834 107 aa6.77□□□□□ -1.33
HDAC3-202ENST00000459727 PRSS1P07477 247 aa6.77□□□□□ -1.33
HDAC3-202ENST00000459727 FGF6P10767 208 aa6.77□□□□□ -1.33
HDAC3-202ENST00000459727 FOXE3Q13461 319 aa6.77□□□□□ -1.33
HDAC3-202ENST00000459727 MUC21Q5SSG8 566 aa6.77□□□□□ -1.33
HDAC3-202ENST00000459727 POLEQ07864 2286 aa6.76□□□□□ -1.33
HDAC3-202ENST00000459727 TRAV12-1A0A0B4J245 112 aa6.76□□□□□ -1.33
HDAC3-202ENST00000459727 CCL25O15444 150 aa6.76□□□□□ -1.33
HDAC3-202ENST00000459727 MSMBP08118 114 aa6.76□□□□□ -1.33
HDAC3-202ENST00000459727 S100A4P26447 101 aaKnown RBP6.76□□□□□ -1.33
HDAC3-202ENST00000459727 PPIFP30405 207 aaKnown RBP6.76□□□□□ -1.33
HDAC3-202ENST00000459727 RPL32P62910 135 aaKnown RBP6.76□□□□□ -1.33
HDAC3-202ENST00000459727 LOXL1Q08397 574 aaPredicted RBP6.76□□□□□ -1.33
HDAC3-202ENST00000459727 ODF1Q14990 250 aa6.76□□□□□ -1.33
HDAC3-202ENST00000459727 TAL2Q16559 108 aa6.76□□□□□ -1.33
HDAC3-202ENST00000459727 ANKRD39Q53RE8 183 aa6.76□□□□□ -1.33
HDAC3-202ENST00000459727 PRR31Q5SQ13 230 aa6.76□□□□□ -1.33
HDAC3-202ENST00000459727 IGFL4Q6B9Z1 124 aa6.76□□□□□ -1.33
HDAC3-202ENST00000459727 ODF3Q96PU9 254 aa6.76□□□□□ -1.33
HDAC3-202ENST00000459727 SMIM2Q9BVW6 85 aa6.76□□□□□ -1.33
HDAC3-202ENST00000459727 DPH3P1Q9H4G8 78 aa6.76□□□□□ -1.33
HDAC3-202ENST00000459727 DAZ1Q9NQZ3 744 aaKnown RBP6.76□□□□□ -1.33
HDAC3-202ENST00000459727 UFC1Q9Y3C8 167 aa6.76□□□□□ -1.33
HDAC3-202ENST00000459727 PKDREJQ9NTG1 2253 aa6.75□□□□□ -1.33
HDAC3-202ENST00000459727 ANKHD1Q8IWZ3 2542 aaKnown RBP6.75□□□□□ -1.33
HDAC3-202ENST00000459727 IGLV2-18A0A075B6J9 118 aa6.75□□□□□ -1.33
HDAC3-202ENST00000459727 IGHV3OR16-8A0A075B7F1 116 aa6.75□□□□□ -1.33
HDAC3-202ENST00000459727 B4DSR2 109 aa6.75□□□□□ -1.33
HDAC3-202ENST00000459727 SMKR1H3BMG3 65 aa6.75□□□□□ -1.33
HDAC3-202ENST00000459727 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.75□□□□□ -1.33
HDAC3-202ENST00000459727 J3QLI3 93 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms