RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 RAB5BP61020 215 aa6.74□□□□□ -1.33
VPS50-207ENST00000458530 Q6AWC8 147 aa6.74□□□□□ -1.33
VPS50-207ENST00000458530 C11orf44Q8N8P7 122 aa6.74□□□□□ -1.33
VPS50-207ENST00000458530 DLX4Q92988 240 aaPredicted RBP6.74□□□□□ -1.33
VPS50-207ENST00000458530 SGK494Q96LW2 274 aa6.74□□□□□ -1.33
VPS50-207ENST00000458530 YPEL4Q96NS1 127 aa6.74□□□□□ -1.33
VPS50-207ENST00000458530 PRR25Q96S07 402 aa6.74□□□□□ -1.33
VPS50-207ENST00000458530 ASCL2Q99929 193 aa6.74□□□□□ -1.33
VPS50-207ENST00000458530 CITED1Q99966 193 aa6.74□□□□□ -1.33
VPS50-207ENST00000458530 MS4A6AQ9H2W1 248 aa6.74□□□□□ -1.33
VPS50-207ENST00000458530 SAV1Q9H4B6 383 aaPredicted RBP6.74□□□□□ -1.33
VPS50-207ENST00000458530 TMA7Q9Y2S6 64 aaKnown RBP6.74□□□□□ -1.33
VPS50-207ENST00000458530 IGKV3-7A0A075B6H7 116 aa6.73□□□□□ -1.33
VPS50-207ENST00000458530 C19orf71A6NCJ1 209 aa6.73□□□□□ -1.33
VPS50-207ENST00000458530 FAM231BA6NCW3 169 aa6.73□□□□□ -1.33
VPS50-207ENST00000458530 OR4C46A6NHA9 309 aa6.73□□□□□ -1.33
VPS50-207ENST00000458530 ZNF705FA8MVS1 300 aaPredicted RBP6.73□□□□□ -1.33
VPS50-207ENST00000458530 NPIPB6E9PJ23 425 aa6.73□□□□□ -1.33
VPS50-207ENST00000458530 K7EQG2 157 aa6.73□□□□□ -1.33
VPS50-207ENST00000458530 DUSP14O95147 198 aaKnown RBP6.73□□□□□ -1.33
VPS50-207ENST00000458530 PF4P02776 101 aa6.73□□□□□ -1.33
VPS50-207ENST00000458530 TYMSP04818 313 aa6.73□□□□□ -1.33
VPS50-207ENST00000458530 CSN3P07498 182 aa6.73□□□□□ -1.33
VPS50-207ENST00000458530 RPS10P46783 165 aaKnown RBP6.73□□□□□ -1.33
VPS50-207ENST00000458530 IGFL4Q6B9Z1 124 aa6.73□□□□□ -1.33
VPS50-207ENST00000458530 EBLN2Q6P2I7 272 aa6.73□□□□□ -1.33
VPS50-207ENST00000458530 NUDT10Q8NFP7 164 aa6.73□□□□□ -1.33
VPS50-207ENST00000458530 OR8A1Q8NGG7 326 aa6.73□□□□□ -1.33
VPS50-207ENST00000458530 DCANP1Q8TF63 244 aa6.73□□□□□ -1.33
VPS50-207ENST00000458530 TSKUQ8WUA8 353 aa6.73□□□□□ -1.33
VPS50-207ENST00000458530 NUDT11Q96G61 164 aa6.73□□□□□ -1.33
VPS50-207ENST00000458530 ZC2HC1AQ96GY0 325 aa6.73□□□□□ -1.33
VPS50-207ENST00000458530 SPAG8Q99932 426 aaPredicted RBP6.73□□□□□ -1.33
VPS50-207ENST00000458530 VGLL1Q99990 258 aa6.73□□□□□ -1.33
VPS50-207ENST00000458530 PYGO2Q9BRQ0 406 aa6.73□□□□□ -1.33
VPS50-207ENST00000458530 GFRA4Q9GZZ7 299 aa6.73□□□□□ -1.33
VPS50-207ENST00000458530 SRD5A3Q9H8P0 318 aa6.73□□□□□ -1.33
VPS50-207ENST00000458530 NAT8BQ9UHF3 227 aa6.73□□□□□ -1.33
VPS50-207ENST00000458530 TGIF2-C20orf24A0A0A6YYL0 155 aa6.72□□□□□ -1.33
VPS50-207ENST00000458530 SMIM27A0A1W2PRY6 76 aa6.72□□□□□ -1.33
VPS50-207ENST00000458530 FABP5P3A8MUU1 101 aa6.72□□□□□ -1.33
VPS50-207ENST00000458530 CMC4P56277 68 aaPredicted RBP6.72□□□□□ -1.33
VPS50-207ENST00000458530 HIST1H1AQ02539 215 aaPredicted RBP6.72□□□□□ -1.33
VPS50-207ENST00000458530 NSUN5P1Q3KNT7 163 aa6.72□□□□□ -1.33
VPS50-207ENST00000458530 WDR73Q6P4I2 378 aa6.72□□□□□ -1.33
VPS50-207ENST00000458530 RASL11AQ6T310 242 aa6.72□□□□□ -1.33
VPS50-207ENST00000458530 ATP5L2Q7Z4Y8 100 aa6.72□□□□□ -1.33
VPS50-207ENST00000458530 WFDC3Q8IUB2 231 aa6.72□□□□□ -1.33
VPS50-207ENST00000458530 OR2D3Q8NGH3 330 aa6.72□□□□□ -1.33
VPS50-207ENST00000458530 OR2K2Q8NGT1 345 aa6.72□□□□□ -1.33
VPS50-207ENST00000458530 Q8TAT8 98 aa6.72□□□□□ -1.33
VPS50-207ENST00000458530 BORCS7Q96B45 105 aa6.72□□□□□ -1.33
VPS50-207ENST00000458530 DUX3Q96PT4 197 aa6.72□□□□□ -1.33
VPS50-207ENST00000458530 ODF3Q96PU9 254 aa6.72□□□□□ -1.33
VPS50-207ENST00000458530 IZUMO1RA6ND01 250 aa6.71□□□□□ -1.34
VPS50-207ENST00000458530 PRAC2D3DTV9 90 aa6.71□□□□□ -1.34
VPS50-207ENST00000458530 MT-ND6P03923 174 aa6.71□□□□□ -1.34
VPS50-207ENST00000458530 S100A8P05109 93 aa6.71□□□□□ -1.34
VPS50-207ENST00000458530 CXCL1P09341 107 aa6.71□□□□□ -1.34
VPS50-207ENST00000458530 ZNF688P0C7X2 276 aa6.71□□□□□ -1.34
VPS50-207ENST00000458530 LEPP41159 167 aa6.71□□□□□ -1.34
VPS50-207ENST00000458530 TFPI2P48307 235 aa6.71□□□□□ -1.34
VPS50-207ENST00000458530 ERCC8Q13216 396 aa6.71□□□□□ -1.34
VPS50-207ENST00000458530 PSMG4Q5JS54 123 aa6.71□□□□□ -1.34
VPS50-207ENST00000458530 KPRPQ5T749 579 aaPredicted RBP6.71□□□□□ -1.34
VPS50-207ENST00000458530 FOXI2Q6ZQN5 318 aa6.71□□□□□ -1.34
VPS50-207ENST00000458530 C20orf173Q96LM9 149 aa6.71□□□□□ -1.34
VPS50-207ENST00000458530 C8orf49Q96NF6 230 aa6.71□□□□□ -1.34
VPS50-207ENST00000458530 AGPAT4-IT1Q9H0P7 198 aa6.71□□□□□ -1.34
VPS50-207ENST00000458530 TMEM189A5PLL7 270 aa6.7□□□□□ -1.34
VPS50-207ENST00000458530 SH2D1AO60880 128 aa6.7□□□□□ -1.34
VPS50-207ENST00000458530 EDN2P20800 178 aa6.7□□□□□ -1.34
VPS50-207ENST00000458530 TSPOP30536 169 aa6.7□□□□□ -1.34
VPS50-207ENST00000458530 KRTAP10-3P60369 221 aa6.7□□□□□ -1.34
VPS50-207ENST00000458530 DEFB114Q30KQ6 69 aa6.7□□□□□ -1.34
VPS50-207ENST00000458530 TMEM61Q8N0U2 210 aa6.7□□□□□ -1.34
VPS50-207ENST00000458530 TRAV21A0A0B4J279 112 aa6.69□□□□□ -1.34
VPS50-207ENST00000458530 A0A1B0GW15 77 aa6.69□□□□□ -1.34
VPS50-207ENST00000458530 HIGD1CA8MV81 97 aa6.69□□□□□ -1.34
VPS50-207ENST00000458530 SAP30O75446 220 aa6.69□□□□□ -1.34
VPS50-207ENST00000458530 HLA-DQA1P01909 254 aa6.69□□□□□ -1.34
VPS50-207ENST00000458530 CRISP2P16562 243 aa6.69□□□□□ -1.34
VPS50-207ENST00000458530 TCL1AP56279 114 aa6.69□□□□□ -1.34
VPS50-207ENST00000458530 BEAN1Q3B7T3 259 aa6.69□□□□□ -1.34
VPS50-207ENST00000458530 ADAMTSL5Q6ZMM2 481 aa6.69□□□□□ -1.34
VPS50-207ENST00000458530 NEU1Q99519 415 aa6.69□□□□□ -1.34
VPS50-207ENST00000458530 GPR61Q9BZJ8 451 aa6.69□□□□□ -1.34
VPS50-207ENST00000458530 DNAH3Q8TD57 4116 aa6.68□□□□□ -1.34
VPS50-207ENST00000458530 A0A0J9YX75 114 aa6.68□□□□□ -1.34
VPS50-207ENST00000458530 ORM1P02763 201 aa6.68□□□□□ -1.34
VPS50-207ENST00000458530 S100A6P06703 90 aa6.68□□□□□ -1.34
VPS50-207ENST00000458530 GPX1P07203 203 aa6.68□□□□□ -1.34
VPS50-207ENST00000458530 INSL3P51460 131 aa6.68□□□□□ -1.34
VPS50-207ENST00000458530 CD300EQ496F6 205 aaPredicted RBP6.68□□□□□ -1.34
VPS50-207ENST00000458530 LINC00322Q6ZN03 302 aaPredicted RBP6.68□□□□□ -1.34
VPS50-207ENST00000458530 GNB1LQ9BYB4 327 aa6.68□□□□□ -1.34
VPS50-207ENST00000458530 TRAPPC1Q9Y5R8 145 aa6.68□□□□□ -1.34
VPS50-207ENST00000458530 NOTCH3Q9UM47 2321 aa6.68□□□□□ -1.34
VPS50-207ENST00000458530 CA1P00915 261 aaPredicted RBP6.67□□□□□ -1.34
VPS50-207ENST00000458530 HLA-DRB4P13762 266 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms