RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 ADGRB3O60242 1522 aa2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 PRDM15P57071 1507 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 LMTK2Q8IWU2 1503 aa2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 DISP1Q96F81 1524 aa2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 UGGT2Q9NYU1 1516 aa2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 CABIN1Q9Y6J0 2220 aa2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 IGHV3-73A0A0B4J1V6 119 aa2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 UBE2L5PA0A1B0GUS4 154 aa2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 J3QLW9 94 aa2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 LYRM1O43325 122 aa2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 NFYAP23511 347 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 CD24P25063 80 aa2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 PEBP1P30086 187 aaKnown RBP2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 CKS2P33552 79 aa2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 UBE2L3P68036 154 aaKnown RBP2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 FUT5Q11128 374 aa2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 RPRMLQ8N4K4 120 aa2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 Q8N8P6 123 aa2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 C1orf64Q8NEQ6 169 aa2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 RHOXF1Q8NHV9 184 aa2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 SPTSSAQ969W0 71 aa2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 LY96Q9Y6Y9 160 aa2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 PREX2Q70Z35 1606 aa2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 ABCA9Q8IUA7 1624 aa2.59□□□□□ -1.99
HMGB3P30-201ENST00000457863 MYO5CQ9NQX4 1742 aa2.59□□□□□ -2
HMGB3P30-201ENST00000457863 MYO18AQ92614 2054 aaKnown RBP2.59□□□□□ -2
HMGB3P30-201ENST00000457863 GTF3C1Q12789 2109 aa2.59□□□□□ -2
HMGB3P30-201ENST00000457863 SCN11AQ9UI33 1791 aa2.59□□□□□ -2
HMGB3P30-201ENST00000457863 CFAP74Q9C0B2 1584 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 ARHGAP21Q5T5U3 1957 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 TARBP1Q13395 1621 aaKnown RBP2.58□□□□□ -2
HMGB3P30-201ENST00000457863 TRAV14DV4A0A0A6YYC5 116 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 TRAV1-1A0A0B4J248 108 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 A0A0B4J2C4 111 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 TRBV7-7A0A0K0K1E9 115 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 A0A1W2PQD3 144 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 H7C423 109 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 K7EM74 188 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 GNGT2O14610 69 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 GNRH2O43555 120 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 IGLV1-51P01701 117 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 CLPSP04118 112 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 IL5P05113 134 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 COL8A2P25067 703 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 FAM229BQ4G0N7 80 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 DPPA3Q6W0C5 159 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 LYZL2Q7Z4W2 148 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 C5orf38Q86SI9 138 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 POM121L12Q8N7R1 296 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 SPANXA2-OT1Q8N9U9 137 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 TSLPQ969D9 159 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 PMCHL2Q9BQD1 86 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 NHP2Q9NX24 153 aaKnown RBP2.58□□□□□ -2
HMGB3P30-201ENST00000457863 PLIN4Q96Q06 1357 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 NCOA2Q15596 1464 aa2.58□□□□□ -2
HMGB3P30-201ENST00000457863 NWD2Q9ULI1 1742 aa2.57□□□□□ -2
HMGB3P30-201ENST00000457863 COL27A1Q8IZC6 1860 aaPredicted RBP2.57□□□□□ -2
HMGB3P30-201ENST00000457863 IGLV3-12A0A075B6K2 115 aa2.57□□□□□ -2
HMGB3P30-201ENST00000457863 C17orf98A8MV24 154 aa2.57□□□□□ -2
HMGB3P30-201ENST00000457863 CREBL2O60519 120 aaPredicted RBP2.57□□□□□ -2
HMGB3P30-201ENST00000457863 CPSF4O95639 269 aaKnown RBP2.57□□□□□ -2
HMGB3P30-201ENST00000457863 CFC1P0CG37 223 aa2.57□□□□□ -2
HMGB3P30-201ENST00000457863 MPV17P39210 176 aa2.57□□□□□ -2
HMGB3P30-201ENST00000457863 SSR2P43308 183 aa2.57□□□□□ -2
HMGB3P30-201ENST00000457863 INSL4Q14641 139 aa2.57□□□□□ -2
HMGB3P30-201ENST00000457863 Q6ZQT7 251 aa2.57□□□□□ -2
HMGB3P30-201ENST00000457863 Q8N814 137 aa2.57□□□□□ -2
HMGB3P30-201ENST00000457863 C15orf53Q8NAA6 179 aa2.57□□□□□ -2
HMGB3P30-201ENST00000457863 MYOZ3Q8TDC0 251 aa2.57□□□□□ -2
HMGB3P30-201ENST00000457863 C20orf78Q9BR46 151 aa2.57□□□□□ -2
HMGB3P30-201ENST00000457863 THADAQ6YHU6 1953 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 CCDC88CQ9P219 2028 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 SNRNP200O75643 2136 aaKnown RBP2.56□□□□□ -2
HMGB3P30-201ENST00000457863 TRAV7A0A075B6U4 112 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 IGHV1-24A0A0C4DH33 117 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 hDV103S1A0JD37 113 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 FAM168BA1KXE4 195 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 NUPR1O60356 82 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 DNAH10OSP0CZ25 163 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 CBLN1P23435 193 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 UBE2SQ16763 222 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 FAM27BQ5VT28 67 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 Q8IYB0 196 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 TMEM105Q8N8V8 129 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 S100A16Q96FQ6 103 aaKnown RBP2.56□□□□□ -2
HMGB3P30-201ENST00000457863 SLC50A1Q9BRV3 221 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 CST11Q9H112 138 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 RABAC1Q9UI14 185 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 MLH3Q9UHC1 1453 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 SHANK2Q9UPX8 1470 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 CUX1P39880 1505 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 SETBP1Q9Y6X0 1596 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 MYO3AQ8NEV4 1616 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 PATJQ8NI35 1801 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 DOCK2Q92608 1830 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 PLXNA2O75051 1894 aa2.56□□□□□ -2
HMGB3P30-201ENST00000457863 IGKV2D-26A0A0A0MRZ7 120 aa2.55□□□□□ -2
HMGB3P30-201ENST00000457863 TRBV10-2A0A0K0K1G8 114 aa2.55□□□□□ -2
HMGB3P30-201ENST00000457863 NDUFAF8A1L188 74 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms