RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 TRAV12-3A0A0B4J271 114 aa12.93□□□□□ -0.34
FAM239A-203ENST00000456563 SMIM9A6NGZ8 99 aa12.93□□□□□ -0.34
FAM239A-203ENST00000456563 ZNF324O75467 553 aaPredicted RBP12.93□□□□□ -0.34
FAM239A-203ENST00000456563 RNASE4P34096 147 aaKnown RBP12.93□□□□□ -0.34
FAM239A-203ENST00000456563 UBE2G1P62253 170 aa12.93□□□□□ -0.34
FAM239A-203ENST00000456563 BTN1A1Q13410 526 aa12.93□□□□□ -0.34
FAM239A-203ENST00000456563 ZNF506Q5JVG8 444 aa12.93□□□□□ -0.34
FAM239A-203ENST00000456563 SAPCD1Q5SSQ6 148 aa12.93□□□□□ -0.34
FAM239A-203ENST00000456563 FAM210AQ96ND0 272 aa12.93□□□□□ -0.34
FAM239A-203ENST00000456563 TMEM208Q9BTX3 173 aa12.93□□□□□ -0.34
FAM239A-203ENST00000456563 H7BYZ3 331 aa12.92□□□□□ -0.34
FAM239A-203ENST00000456563 MIFP14174 115 aa12.92□□□□□ -0.34
FAM239A-203ENST00000456563 Q86TA4 180 aa12.92□□□□□ -0.34
FAM239A-203ENST00000456563 LINC01587Q99440 93 aa12.92□□□□□ -0.34
FAM239A-203ENST00000456563 NIPSNAP3BQ9BS92 247 aa12.92□□□□□ -0.34
FAM239A-203ENST00000456563 ZFP30Q9Y2G7 519 aa12.92□□□□□ -0.34
FAM239A-203ENST00000456563 NDUFS6O75380 124 aaKnown RBP12.91□□□□□ -0.34
FAM239A-203ENST00000456563 RAB14P61106 215 aa12.91□□□□□ -0.34
FAM239A-203ENST00000456563 Q6AWC8 147 aa12.91□□□□□ -0.34
FAM239A-203ENST00000456563 Q8NAQ8 132 aa12.91□□□□□ -0.34
FAM239A-203ENST00000456563 LTAP01374 205 aa12.9□□□□□ -0.34
FAM239A-203ENST00000456563 TAS2R60P59551 318 aa12.9□□□□□ -0.34
FAM239A-203ENST00000456563 TOR2AQ5JU69 321 aa12.9□□□□□ -0.34
FAM239A-203ENST00000456563 C8orf49Q96NF6 230 aa12.9□□□□□ -0.34
FAM239A-203ENST00000456563 PYGO2Q9BRQ0 406 aa12.9□□□□□ -0.34
FAM239A-203ENST00000456563 IGHV4-28A0A0C4DH34 117 aa12.89□□□□□ -0.35
FAM239A-203ENST00000456563 RRN3P1Q2M238 152 aa12.89□□□□□ -0.35
FAM239A-203ENST00000456563 SMUG1Q53HV7 270 aa12.89□□□□□ -0.35
FAM239A-203ENST00000456563 CLLU1Q5K131 121 aa12.89□□□□□ -0.35
FAM239A-203ENST00000456563 COX8CQ7Z4L0 72 aa12.89□□□□□ -0.35
FAM239A-203ENST00000456563 LINC00467Q9BRT7 94 aa12.89□□□□□ -0.35
FAM239A-203ENST00000456563 EIF5A2Q9GZV4 153 aaKnown RBP12.89□□□□□ -0.35
FAM239A-203ENST00000456563 C11orf68Q9H3H3 251 aaKnown RBP12.89□□□□□ -0.35
FAM239A-203ENST00000456563 MED9Q9NWA0 146 aa12.89□□□□□ -0.35
FAM239A-203ENST00000456563 NBEAL2Q6ZNJ1 2754 aa12.88□□□□□ -0.35
FAM239A-203ENST00000456563 ZNF705GA8MUZ8 300 aaPredicted RBP12.88□□□□□ -0.35
FAM239A-203ENST00000456563 TMEM250H0YL14 139 aa12.88□□□□□ -0.35
FAM239A-203ENST00000456563 RPL35P42766 123 aaKnown RBP12.88□□□□□ -0.35
FAM239A-203ENST00000456563 Q6ZQT7 251 aa12.88□□□□□ -0.35
FAM239A-203ENST00000456563 DERL1Q9BUN8 251 aa12.88□□□□□ -0.35
FAM239A-203ENST00000456563 EDA2RQ9HAV5 297 aa12.88□□□□□ -0.35
FAM239A-203ENST00000456563 TRAV21A0A0B4J279 112 aa12.87□□□□□ -0.35
FAM239A-203ENST00000456563 GCGP01275 180 aa12.87□□□□□ -0.35
FAM239A-203ENST00000456563 ZNF80P51504 273 aaPredicted RBP12.87□□□□□ -0.35
FAM239A-203ENST00000456563 TMEM183AQ8IXX5 376 aa12.87□□□□□ -0.35
FAM239A-203ENST00000456563 A0A0J9YWU9 116 aa12.86□□□□□ -0.35
FAM239A-203ENST00000456563 TMEM189A5PLL7 270 aa12.86□□□□□ -0.35
FAM239A-203ENST00000456563 PRM2P04554 102 aa12.86□□□□□ -0.35
FAM239A-203ENST00000456563 BAGE2Q86Y30 109 aa12.86□□□□□ -0.35
FAM239A-203ENST00000456563 MLST8Q9BVC4 326 aa12.86□□□□□ -0.35
FAM239A-203ENST00000456563 COL7A1Q02388 2944 aa12.85□□□□□ -0.35
FAM239A-203ENST00000456563 TENM3Q9P273 2699 aa12.85□□□□□ -0.35
FAM239A-203ENST00000456563 IGHV1OR15-1A0A075B7D0 117 aa12.85□□□□□ -0.35
FAM239A-203ENST00000456563 RGS13O14921 159 aa12.85□□□□□ -0.35
FAM239A-203ENST00000456563 PFN1P07737 140 aaKnown RBP12.85□□□□□ -0.35
FAM239A-203ENST00000456563 HTN1P15515 57 aa12.85□□□□□ -0.35
FAM239A-203ENST00000456563 AZU1P20160 251 aa12.85□□□□□ -0.35
FAM239A-203ENST00000456563 ZNF493Q6ZR52 646 aa12.85□□□□□ -0.35
FAM239A-203ENST00000456563 EIF4E3Q8N5X7 224 aaKnown RBP12.85□□□□□ -0.35
FAM239A-203ENST00000456563 ZC2HC1AQ96GY0 325 aa12.85□□□□□ -0.35
FAM239A-203ENST00000456563 DEFB4AO15263 64 aa12.84□□□□□ -0.35
FAM239A-203ENST00000456563 ANXA2RQ3ZCQ2 193 aa12.84□□□□□ -0.35
FAM239A-203ENST00000456563 CENPWQ5EE01 88 aa12.84□□□□□ -0.35
FAM239A-203ENST00000456563 RNASE8Q8TDE3 154 aaKnown RBP12.84□□□□□ -0.35
FAM239A-203ENST00000456563 TMEM263Q8WUH6 116 aaKnown RBP12.84□□□□□ -0.35
FAM239A-203ENST00000456563 C16orf74Q96GX8 76 aa12.84□□□□□ -0.35
FAM239A-203ENST00000456563 SMDT1Q9H4I9 107 aa12.84□□□□□ -0.35
FAM239A-203ENST00000456563 RAB19A4D1S5 217 aa12.83□□□□□ -0.36
FAM239A-203ENST00000456563 FABP5P3A8MUU1 101 aa12.83□□□□□ -0.36
FAM239A-203ENST00000456563 SRP19P09132 144 aaKnown RBP12.83□□□□□ -0.36
FAM239A-203ENST00000456563 PEA15Q15121 130 aa12.83□□□□□ -0.36
FAM239A-203ENST00000456563 TDRG1Q3Y452 100 aa12.83□□□□□ -0.36
FAM239A-203ENST00000456563 FAM159AQ6UWV7 190 aa12.83□□□□□ -0.36
FAM239A-203ENST00000456563 SMIM12Q96EX1 92 aa12.83□□□□□ -0.36
FAM239A-203ENST00000456563 PARLQ9H300 379 aa12.83□□□□□ -0.36
FAM239A-203ENST00000456563 TRBV20OR9-2A0A075B6H5 130 aa12.82□□□□□ -0.36
FAM239A-203ENST00000456563 PLAC8L1A1L4L8 177 aa12.82□□□□□ -0.36
FAM239A-203ENST00000456563 CBY3A6NI87 242 aa12.82□□□□□ -0.36
FAM239A-203ENST00000456563 IGLV2-8P01709 118 aa12.82□□□□□ -0.36
FAM239A-203ENST00000456563 GNG4P50150 75 aa12.82□□□□□ -0.36
FAM239A-203ENST00000456563 CRIP1P50238 77 aa12.82□□□□□ -0.36
FAM239A-203ENST00000456563 ZNF674Q2M3X9 581 aa12.82□□□□□ -0.36
FAM239A-203ENST00000456563 MUC21Q5SSG8 566 aa12.82□□□□□ -0.36
FAM239A-203ENST00000456563 NHLRC2Q8NBF2 726 aa12.82□□□□□ -0.36
FAM239A-203ENST00000456563 C9JCJ5 164 aa12.81□□□□□ -0.36
FAM239A-203ENST00000456563 SRSF3P84103 164 aaKnown RBP12.81□□□□□ -0.36
FAM239A-203ENST00000456563 FAM162BQ5T6X4 162 aa12.81□□□□□ -0.36
FAM239A-203ENST00000456563 KCNS1Q96KK3 526 aa12.81□□□□□ -0.36
FAM239A-203ENST00000456563 WWC2-AS2Q96NR7 200 aa12.81□□□□□ -0.36
FAM239A-203ENST00000456563 C11orf21Q9P2W6 132 aa12.81□□□□□ -0.36
FAM239A-203ENST00000456563 C9JQL5 133 aa12.8□□□□□ -0.36
FAM239A-203ENST00000456563 EMP1P54849 157 aa12.8□□□□□ -0.36
FAM239A-203ENST00000456563 IBA57Q5T440 356 aaKnown RBP12.8□□□□□ -0.36
FAM239A-203ENST00000456563 NAGKQ9UJ70 344 aa12.8□□□□□ -0.36
FAM239A-203ENST00000456563 TP53TG3Q9ULZ0 132 aa12.8□□□□□ -0.36
FAM239A-203ENST00000456563 SH2D1AO60880 128 aa12.79□□□□□ -0.36
FAM239A-203ENST00000456563 CEBPGP53567 150 aa12.79□□□□□ -0.36
FAM239A-203ENST00000456563 C11orf72Q8NBR9 251 aa12.79□□□□□ -0.36
FAM239A-203ENST00000456563 SDF2L1Q9HCN8 221 aa12.79□□□□□ -0.36
FAM239A-203ENST00000456563 TRGV11A0A075B6L2 103 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms