RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 YLPM1P49750 1951 aaKnown RBP3.96□□□□□ -1.78
PCDH9-203ENST00000456367 PINLYPA6NC86 204 aa3.96□□□□□ -1.78
PCDH9-203ENST00000456367 P0DMU3 169 aa3.96□□□□□ -1.78
PCDH9-203ENST00000456367 FAM231AP0DMU4 169 aa3.96□□□□□ -1.78
PCDH9-203ENST00000456367 FAM231CP0DMU5 169 aa3.96□□□□□ -1.78
PCDH9-203ENST00000456367 EGR2P11161 476 aaPredicted RBP3.96□□□□□ -1.78
PCDH9-203ENST00000456367 CMC4P56277 68 aaPredicted RBP3.96□□□□□ -1.78
PCDH9-203ENST00000456367 TMEM219Q86XT9 240 aa3.96□□□□□ -1.78
PCDH9-203ENST00000456367 TOMM6Q96B49 74 aa3.96□□□□□ -1.78
PCDH9-203ENST00000456367 LINC01587Q99440 93 aa3.96□□□□□ -1.78
PCDH9-203ENST00000456367 DOCK3Q8IZD9 2030 aa3.96□□□□□ -1.78
PCDH9-203ENST00000456367 HERVK_113P63121 156 aa3.96□□□□□ -1.78
PCDH9-203ENST00000456367 DUX4L9Q6RFH8 374 aaPredicted RBP3.96□□□□□ -1.78
PCDH9-203ENST00000456367 C2orf91Q6ZV80 131 aa3.96□□□□□ -1.78
PCDH9-203ENST00000456367 WDR86Q86TI4 376 aa3.96□□□□□ -1.78
PCDH9-203ENST00000456367 FAM110DQ8TAY7 271 aaPredicted RBP3.96□□□□□ -1.78
PCDH9-203ENST00000456367 JPT2Q9H910 190 aa3.96□□□□□ -1.78
PCDH9-203ENST00000456367 ZNF71Q9NQZ8 489 aaPredicted RBP3.96□□□□□ -1.78
PCDH9-203ENST00000456367 IGHG2P01859 326 aa3.95□□□□□ -1.78
PCDH9-203ENST00000456367 PRR30Q53SZ7 412 aaPredicted RBP3.95□□□□□ -1.78
PCDH9-203ENST00000456367 Q8N1Y9 231 aa3.95□□□□□ -1.78
PCDH9-203ENST00000456367 ZNF491Q8N8L2 437 aa3.95□□□□□ -1.78
PCDH9-203ENST00000456367 RNASE6Q93091 150 aaKnown RBP3.95□□□□□ -1.78
PCDH9-203ENST00000456367 FRMD6-AS1P0C7T7 363 aa3.95□□□□□ -1.78
PCDH9-203ENST00000456367 TEX36Q5VZQ5 186 aa3.95□□□□□ -1.78
PCDH9-203ENST00000456367 PATE2Q6UY27 113 aa3.95□□□□□ -1.78
PCDH9-203ENST00000456367 Q6ZR03 302 aa3.95□□□□□ -1.78
PCDH9-203ENST00000456367 Q8N976 141 aa3.95□□□□□ -1.78
PCDH9-203ENST00000456367 MLST8Q9BVC4 326 aa3.95□□□□□ -1.78
PCDH9-203ENST00000456367 V9GYY9 64 aa3.95□□□□□ -1.78
PCDH9-203ENST00000456367 SHANK1Q9Y566 2161 aa3.95□□□□□ -1.78
PCDH9-203ENST00000456367 TRAV41A0A0B4J266 112 aa3.95□□□□□ -1.78
PCDH9-203ENST00000456367 BSPH1Q075Z2 132 aa3.95□□□□□ -1.78
PCDH9-203ENST00000456367 MRAPQ8TCY5 172 aa3.95□□□□□ -1.78
PCDH9-203ENST00000456367 SPRR3Q9UBC9 169 aa3.95□□□□□ -1.78
PCDH9-203ENST00000456367 ARHGEF17Q96PE2 2063 aaPredicted RBP3.95□□□□□ -1.78
PCDH9-203ENST00000456367 PLXND1Q9Y4D7 1925 aa3.95□□□□□ -1.78
PCDH9-203ENST00000456367 IGKV3-20P01619 116 aa3.95□□□□□ -1.78
PCDH9-203ENST00000456367 ZNF295-AS1Q8N0V1 137 aa3.95□□□□□ -1.78
PCDH9-203ENST00000456367 PHF3Q92576 2039 aaKnown RBP3.95□□□□□ -1.78
PCDH9-203ENST00000456367 IGHV3OR16-8A0A075B7F1 116 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 IGKV3D-20A0A0C4DH25 116 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 A0A0U1RRA0 63 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 CENPVL3A0A0U1RRI6 287 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 NDUFA7O95182 113 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 TCL1BO95988 128 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 IGLV2-14P01704 120 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 CFAP126Q5VTH2 177 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 MUSTN1Q8IVN3 82 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 TP73-AS1Q9UF72 201 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 FAM186AA6NE01 2351 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 IGKV3OR2-268A0A0C4DH90 116 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 JMJD7-PLA2G4BH0Y9G9 81 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 IGHG3P01860 377 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 MALP21145 153 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 ZNF134P52741 427 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 GDF5OSQ5U4N7 250 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 ATP5EP2Q5VTU8 51 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 VSIG2Q96IQ7 327 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 U3KQK5 164 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 KIAA0100Q14667 2235 aaKnown RBP3.94□□□□□ -1.78
PCDH9-203ENST00000456367 KMT2EQ8IZD2 1858 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 FAM27E3Q08E93 113 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 ORMDL1Q9P0S3 153 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 PLXNB3Q9ULL4 1909 aa3.94□□□□□ -1.78
PCDH9-203ENST00000456367 ZNF106Q9H2Y7 1883 aaKnown RBP3.93□□□□□ -1.78
PCDH9-203ENST00000456367 FAM240AA0A1B0GVK7 77 aa3.93□□□□□ -1.78
PCDH9-203ENST00000456367 WISP1O95388 367 aa3.93□□□□□ -1.78
PCDH9-203ENST00000456367 IGHV1-69P01742 117 aa3.93□□□□□ -1.78
PCDH9-203ENST00000456367 ATP5EP56381 51 aaPredicted RBP3.93□□□□□ -1.78
PCDH9-203ENST00000456367 ESPL1Q14674 2120 aa3.93□□□□□ -1.78
PCDH9-203ENST00000456367 MDS2Q8NDY4 140 aa3.93□□□□□ -1.78
PCDH9-203ENST00000456367 ZNF503Q96F45 646 aa3.93□□□□□ -1.78
PCDH9-203ENST00000456367 F6UB75 175 aa3.93□□□□□ -1.78
PCDH9-203ENST00000456367 C6orf226Q5I0X4 101 aa3.93□□□□□ -1.78
PCDH9-203ENST00000456367 LINC00527Q9UJ94 153 aa3.93□□□□□ -1.78
PCDH9-203ENST00000456367 TRAV26-2A0A0B4J265 109 aa3.93□□□□□ -1.78
PCDH9-203ENST00000456367 M0QXV9 152 aa3.93□□□□□ -1.78
PCDH9-203ENST00000456367 CXCL5P42830 114 aa3.93□□□□□ -1.78
PCDH9-203ENST00000456367 LINC00310P59036 64 aa3.93□□□□□ -1.78
PCDH9-203ENST00000456367 BAALCQ8WXS3 180 aa3.93□□□□□ -1.78
PCDH9-203ENST00000456367 PROK2Q9HC23 129 aa3.93□□□□□ -1.78
PCDH9-203ENST00000456367 A0A087WWL8 130 aa3.93□□□□□ -1.78
PCDH9-203ENST00000456367 MBD3L4A6NDZ8 208 aaPredicted RBP3.93□□□□□ -1.78
PCDH9-203ENST00000456367 MBD3L3A6NE82 208 aaPredicted RBP3.93□□□□□ -1.78
PCDH9-203ENST00000456367 MBD3L5A6NJ08 208 aaPredicted RBP3.93□□□□□ -1.78
PCDH9-203ENST00000456367 PATE3B3GLJ2 98 aa3.93□□□□□ -1.78
PCDH9-203ENST00000456367 LGALS9O00182 355 aa3.93□□□□□ -1.78
PCDH9-203ENST00000456367 IGLV1-44P01699 117 aa3.93□□□□□ -1.78
PCDH9-203ENST00000456367 PSMB8P28062 276 aa3.93□□□□□ -1.78
PCDH9-203ENST00000456367 VMO1Q7Z5L0 202 aa3.93□□□□□ -1.78
PCDH9-203ENST00000456367 MBD3L2Q8NHZ7 208 aaPredicted RBP3.93□□□□□ -1.78
PCDH9-203ENST00000456367 DSCR8Q96T75 97 aa3.93□□□□□ -1.78
PCDH9-203ENST00000456367 KIAA2026Q5HYC2 2103 aa3.93□□□□□ -1.78
PCDH9-203ENST00000456367 TRGV2A0A075B6R0 118 aa3.92□□□□□ -1.78
PCDH9-203ENST00000456367 IGHV3OR16-12A0A075B7B8 117 aa3.92□□□□□ -1.78
PCDH9-203ENST00000456367 TRBV30A0A0K0K1B3 111 aa3.92□□□□□ -1.78
PCDH9-203ENST00000456367 SLC25A29Q8N8R3 303 aa3.92□□□□□ -1.78
PCDH9-203ENST00000456367 FDCSPQ8NFU4 85 aa3.92□□□□□ -1.78
PCDH9-203ENST00000456367 RTTNQ86VV8 2226 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms