RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 MRPL53Q96EL3 112 aaKnown RBP13.61□□□□□ -0.23
PTPN6-204ENST00000456013 CCDC140Q96MF4 163 aa13.61□□□□□ -0.23
PTPN6-204ENST00000456013 IGHV3-66A0A0C4DH42 116 aa13.6□□□□□ -0.23
PTPN6-204ENST00000456013 OR5A1Q8NGJ0 315 aa13.6□□□□□ -0.23
PTPN6-204ENST00000456013 TRAV8-2A0A0B4J237 113 aa13.6□□□□□ -0.23
PTPN6-204ENST00000456013 IGHV7-4-1A0A0J9YVY3 117 aa13.6□□□□□ -0.23
PTPN6-204ENST00000456013 SAP30O75446 220 aa13.6□□□□□ -0.23
PTPN6-204ENST00000456013 DPM2O94777 84 aa13.6□□□□□ -0.23
PTPN6-204ENST00000456013 TRGV3P03979 118 aa13.6□□□□□ -0.23
PTPN6-204ENST00000456013 SMIM13P0DJ93 91 aa13.6□□□□□ -0.23
PTPN6-204ENST00000456013 ADORA2A-AS1P86434 159 aa13.6□□□□□ -0.23
PTPN6-204ENST00000456013 TMEM78Q5T7P6 136 aa13.6□□□□□ -0.23
PTPN6-204ENST00000456013 CLEC19AQ6UXS0 136 aa13.6□□□□□ -0.23
PTPN6-204ENST00000456013 MEGF9Q9H1U4 602 aa13.6□□□□□ -0.23
PTPN6-204ENST00000456013 ZFHX2Q9C0A1 2572 aaPredicted RBP13.59□□□□□ -0.23
PTPN6-204ENST00000456013 FOXC1Q12948 553 aa13.59□□□□□ -0.23
PTPN6-204ENST00000456013 AJUBAQ96IF1 538 aa13.59□□□□□ -0.23
PTPN6-204ENST00000456013 HIF1ANQ9NWT6 349 aa13.59□□□□□ -0.23
PTPN6-204ENST00000456013 SMIM17P0DL12 118 aa13.59□□□□□ -0.23
PTPN6-204ENST00000456013 HLA-DRB4P13762 266 aa13.59□□□□□ -0.23
PTPN6-204ENST00000456013 CHAC1Q9BUX1 264 aa13.59□□□□□ -0.23
PTPN6-204ENST00000456013 SPCS1Q9Y6A9 102 aa13.59□□□□□ -0.23
PTPN6-204ENST00000456013 HLA-DRB4X5D2U9 266 aa13.59□□□□□ -0.23
PTPN6-204ENST00000456013 NRACQ8N912 160 aa13.58□□□□□ -0.24
PTPN6-204ENST00000456013 TTTY13Q9BZ97 58 aa13.58□□□□□ -0.24
PTPN6-204ENST00000456013 IGHV4-4A0A075B6R2 117 aa13.58□□□□□ -0.24
PTPN6-204ENST00000456013 TMEM8BA6NDV4 472 aa13.58□□□□□ -0.24
PTPN6-204ENST00000456013 GCSHP23434 173 aa13.58□□□□□ -0.24
PTPN6-204ENST00000456013 UBE2E1P51965 193 aa13.58□□□□□ -0.24
PTPN6-204ENST00000456013 FXYD2P54710 66 aa13.58□□□□□ -0.24
PTPN6-204ENST00000456013 TM4SF20Q53R12 229 aa13.58□□□□□ -0.24
PTPN6-204ENST00000456013 ZC2HC1BQ5TFG8 222 aa13.58□□□□□ -0.24
PTPN6-204ENST00000456013 C9orf47Q6ZRZ4 202 aa13.58□□□□□ -0.24
PTPN6-204ENST00000456013 GTSCR1Q86UQ5 136 aa13.58□□□□□ -0.24
PTPN6-204ENST00000456013 EEF1AKMT3Q96AZ1 226 aa13.58□□□□□ -0.24
PTPN6-204ENST00000456013 CSTL1Q9H114 145 aa13.58□□□□□ -0.24
PTPN6-204ENST00000456013 WNK2Q9Y3S1 2297 aa13.57□□□□□ -0.24
PTPN6-204ENST00000456013 TRBV25-1A0A075B6N4 114 aa13.57□□□□□ -0.24
PTPN6-204ENST00000456013 LAGE3Q14657 143 aa13.57□□□□□ -0.24
PTPN6-204ENST00000456013 NEGR1Q7Z3B1 354 aa13.57□□□□□ -0.24
PTPN6-204ENST00000456013 METTL26Q96S19 204 aa13.57□□□□□ -0.24
PTPN6-204ENST00000456013 TLN1Q9Y490 2541 aaKnown RBP13.57□□□□□ -0.24
PTPN6-204ENST00000456013 IGHV3OR16-13A0A075B7E8 117 aa13.57□□□□□ -0.24
PTPN6-204ENST00000456013 IGHV3-74A0A0B4J1X5 117 aa13.57□□□□□ -0.24
PTPN6-204ENST00000456013 FABP2P12104 132 aa13.57□□□□□ -0.24
PTPN6-204ENST00000456013 SAMD5Q5TGI4 173 aa13.57□□□□□ -0.24
PTPN6-204ENST00000456013 C8orf86Q6ZUL3 223 aa13.57□□□□□ -0.24
PTPN6-204ENST00000456013 MYOZ3Q8TDC0 251 aa13.57□□□□□ -0.24
PTPN6-204ENST00000456013 CSMD1Q96PZ7 3565 aa13.56□□□□□ -0.24
PTPN6-204ENST00000456013 TRBV7-1A0A0A6YYK4 115 aa13.56□□□□□ -0.24
PTPN6-204ENST00000456013 G3V318 75 aa13.56□□□□□ -0.24
PTPN6-204ENST00000456013 G3V4G9 280 aa13.56□□□□□ -0.24
PTPN6-204ENST00000456013 SELENOKQ9Y6D0 94 aa13.56□□□□□ -0.24
PTPN6-204ENST00000456013 U3KQE9 123 aa13.56□□□□□ -0.24
PTPN6-204ENST00000456013 TRAV40A0A0B4J280 105 aa13.55□□□□□ -0.24
PTPN6-204ENST00000456013 TMEM160Q9NX00 188 aa13.55□□□□□ -0.24
PTPN6-204ENST00000456013 LINC01548A6NM66 108 aa13.54□□□□□ -0.24
PTPN6-204ENST00000456013 TM2D2Q9BX73 214 aa13.54□□□□□ -0.24
PTPN6-204ENST00000456013 MRPL35Q9NZE8 188 aaKnown RBP13.54□□□□□ -0.24
PTPN6-204ENST00000456013 UFC1Q9Y3C8 167 aa13.54□□□□□ -0.24
PTPN6-204ENST00000456013 PTPRQQ9UMZ3 2332 aa13.54□□□□□ -0.24
PTPN6-204ENST00000456013 IGHV3-49A0A0A0MS15 119 aa13.54□□□□□ -0.24
PTPN6-204ENST00000456013 TRAV26-2A0A0B4J265 109 aa13.54□□□□□ -0.24
PTPN6-204ENST00000456013 SRSF1Q07955 248 aaKnown RBP eCLIP13.54□□□□□ -0.24
PTPN6-204ENST00000456013 SPANXN1Q5VSR9 72 aa13.54□□□□□ -0.24
PTPN6-204ENST00000456013 A0A087WX48 190 aa13.53□□□□□ -0.24
PTPN6-204ENST00000456013 ZNF207O43670 478 aaKnown RBP13.53□□□□□ -0.24
PTPN6-204ENST00000456013 SAA4P35542 130 aa13.53□□□□□ -0.24
PTPN6-204ENST00000456013 CEND1Q8N111 149 aa13.53□□□□□ -0.24
PTPN6-204ENST00000456013 PHLDA1Q8WV24 401 aaPredicted RBP13.53□□□□□ -0.24
PTPN6-204ENST00000456013 HRNRQ86YZ3 2850 aaPredicted RBP13.53□□□□□ -0.24
PTPN6-204ENST00000456013 CENPVL3A0A0U1RRI6 287 aa13.52□□□□□ -0.24
PTPN6-204ENST00000456013 Q6ZQT7 251 aa13.52□□□□□ -0.24
PTPN6-204ENST00000456013 MRAP2Q96G30 205 aa13.52□□□□□ -0.24
PTPN6-204ENST00000456013 LENEPQ9Y5L5 61 aa13.51□□□□□ -0.25
PTPN6-204ENST00000456013 SPTBN2O15020 2390 aa13.51□□□□□ -0.25
PTPN6-204ENST00000456013 H3BVH4 76 aa13.5□□□□□ -0.25
PTPN6-204ENST00000456013 PLNP26678 52 aa13.5□□□□□ -0.25
PTPN6-204ENST00000456013 ATP5G2Q06055 141 aa13.5□□□□□ -0.25
PTPN6-204ENST00000456013 TAL2Q16559 108 aa13.5□□□□□ -0.25
PTPN6-204ENST00000456013 C5orf56Q8N8D9 126 aa13.5□□□□□ -0.25
PTPN6-204ENST00000456013 MAPKAPK5-AS1Q8N8E1 139 aa13.5□□□□□ -0.25
PTPN6-204ENST00000456013 C16orf92Q96LL3 132 aa13.5□□□□□ -0.25
PTPN6-204ENST00000456013 ATP6V0BQ99437 205 aa13.5□□□□□ -0.25
PTPN6-204ENST00000456013 A0A1W2PPR1 153 aa13.5□□□□□ -0.25
PTPN6-204ENST00000456013 K7ERJ3 54 aa13.5□□□□□ -0.25
PTPN6-204ENST00000456013 PRR9Q5T870 116 aa13.5□□□□□ -0.25
PTPN6-204ENST00000456013 SMIM2Q9BVW6 85 aa13.5□□□□□ -0.25
PTPN6-204ENST00000456013 NHP2Q9NX24 153 aaKnown RBP13.5□□□□□ -0.25
PTPN6-204ENST00000456013 TRAV12-1A0A0B4J245 112 aa13.49□□□□□ -0.25
PTPN6-204ENST00000456013 KLRB1Q12918 225 aa13.49□□□□□ -0.25
PTPN6-204ENST00000456013 C9orf139Q6ZV77 190 aa13.49□□□□□ -0.25
PTPN6-204ENST00000456013 GLMPQ8WWB7 406 aa13.49□□□□□ -0.25
PTPN6-204ENST00000456013 ITLN2Q8WWU7 325 aaPredicted RBP13.49□□□□□ -0.25
PTPN6-204ENST00000456013 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.49□□□□□ -0.25
PTPN6-204ENST00000456013 EFNA4P52798 201 aa13.49□□□□□ -0.25
PTPN6-204ENST00000456013 RIPPLY3P57055 190 aa13.49□□□□□ -0.25
PTPN6-204ENST00000456013 NPFFO15130 113 aa13.47□□□□□ -0.25
PTPN6-204ENST00000456013 C20orf173Q96LM9 149 aa13.47□□□□□ -0.25
PTPN6-204ENST00000456013 H7C1H1 209 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms