RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 VPS25Q9BRG1 176 aa9.38□□□□□ -0.91
SEMA4D-213ENST00000455551 CACNA1AO00555 2505 aa9.38□□□□□ -0.91
SEMA4D-213ENST00000455551 DEFB1P60022 68 aa9.38□□□□□ -0.91
SEMA4D-213ENST00000455551 PAX8Q06710 450 aa9.38□□□□□ -0.91
SEMA4D-213ENST00000455551 LCNL1Q6ZST4 164 aa9.38□□□□□ -0.91
SEMA4D-213ENST00000455551 C16orf92Q96LL3 132 aa9.38□□□□□ -0.91
SEMA4D-213ENST00000455551 UTP20O75691 2785 aaKnown RBP9.38□□□□□ -0.91
SEMA4D-213ENST00000455551 HBDP02042 147 aa9.38□□□□□ -0.91
SEMA4D-213ENST00000455551 ARL3P36405 182 aa9.38□□□□□ -0.91
SEMA4D-213ENST00000455551 PTTG1IPP53801 180 aa9.38□□□□□ -0.91
SEMA4D-213ENST00000455551 LINC01559Q495D7 138 aa9.38□□□□□ -0.91
SEMA4D-213ENST00000455551 UNQ9165/PRO28630Q6UXU0 137 aa9.38□□□□□ -0.91
SEMA4D-213ENST00000455551 MYO18BQ8IUG5 2567 aa9.38□□□□□ -0.91
SEMA4D-213ENST00000455551 SFTPCP11686 197 aa9.37□□□□□ -0.91
SEMA4D-213ENST00000455551 IGKV3-7A0A075B6H7 116 aa9.37□□□□□ -0.91
SEMA4D-213ENST00000455551 ANKRD39Q53RE8 183 aa9.37□□□□□ -0.91
SEMA4D-213ENST00000455551 PSMG3-AS1Q96PY0 264 aa9.37□□□□□ -0.91
SEMA4D-213ENST00000455551 CCL19Q99731 98 aa9.37□□□□□ -0.91
SEMA4D-213ENST00000455551 PIMREGQ9BSJ6 248 aa9.37□□□□□ -0.91
SEMA4D-213ENST00000455551 COX11Q9Y6N1 276 aa9.37□□□□□ -0.91
SEMA4D-213ENST00000455551 VAMP3Q15836 100 aa9.37□□□□□ -0.91
SEMA4D-213ENST00000455551 UFC1Q9Y3C8 167 aa9.37□□□□□ -0.91
SEMA4D-213ENST00000455551 CSMD2Q7Z408 3487 aa9.36□□□□□ -0.91
SEMA4D-213ENST00000455551 RBAKDNA6NC62 111 aa9.36□□□□□ -0.91
SEMA4D-213ENST00000455551 SMAD7O15105 426 aaKnown RBP9.36□□□□□ -0.91
SEMA4D-213ENST00000455551 IGF1P05019 195 aa9.36□□□□□ -0.91
SEMA4D-213ENST00000455551 KLK9Q2XQG4 91 aa9.36□□□□□ -0.91
SEMA4D-213ENST00000455551 MS4A6AQ9H2W1 248 aa9.36□□□□□ -0.91
SEMA4D-213ENST00000455551 KLK9Q9UKQ9 250 aa9.36□□□□□ -0.91
SEMA4D-213ENST00000455551 H3BUX3 64 aa9.36□□□□□ -0.91
SEMA4D-213ENST00000455551 BVES-AS1Q5T3Y7 98 aa9.36□□□□□ -0.91
SEMA4D-213ENST00000455551 ZNF738Q8NE65 137 aa9.36□□□□□ -0.91
SEMA4D-213ENST00000455551 C20orf173Q96LM9 149 aa9.36□□□□□ -0.91
SEMA4D-213ENST00000455551 MAP1LC3AQ9H492 121 aa9.36□□□□□ -0.91
SEMA4D-213ENST00000455551 USP9YO00507 2555 aaPredicted RBP9.36□□□□□ -0.91
SEMA4D-213ENST00000455551 SPRY2O43597 315 aa9.35□□□□□ -0.91
SEMA4D-213ENST00000455551 ORAOV1Q8WV07 137 aa9.35□□□□□ -0.91
SEMA4D-213ENST00000455551 IFI27L1Q96BM0 104 aa9.35□□□□□ -0.91
SEMA4D-213ENST00000455551 TRAV26-2A0A0B4J265 109 aa9.35□□□□□ -0.91
SEMA4D-213ENST00000455551 CCL25O15444 150 aa9.35□□□□□ -0.91
SEMA4D-213ENST00000455551 TNFRSF6BO95407 300 aa9.35□□□□□ -0.91
SEMA4D-213ENST00000455551 RPL11P62913 178 aaKnown RBP9.35□□□□□ -0.91
SEMA4D-213ENST00000455551 PRR9Q5T870 116 aa9.35□□□□□ -0.91
SEMA4D-213ENST00000455551 DOPEY1Q5JWR5 2465 aa9.35□□□□□ -0.91
SEMA4D-213ENST00000455551 IGHV4-30-2A0A087WSY4 118 aa9.35□□□□□ -0.91
SEMA4D-213ENST00000455551 ATP5J2P56134 94 aa9.35□□□□□ -0.91
SEMA4D-213ENST00000455551 Q6ZS46 218 aa9.35□□□□□ -0.91
SEMA4D-213ENST00000455551 CNFNQ9BYD5 112 aa9.35□□□□□ -0.91
SEMA4D-213ENST00000455551 KLK15Q9H2R5 256 aa9.35□□□□□ -0.91
SEMA4D-213ENST00000455551 U3KQE9 123 aa9.35□□□□□ -0.91
SEMA4D-213ENST00000455551 POLQO75417 2590 aa9.35□□□□□ -0.91
SEMA4D-213ENST00000455551 COX8AP10176 69 aa9.34□□□□□ -0.91
SEMA4D-213ENST00000455551 LEPP41159 167 aa9.34□□□□□ -0.91
SEMA4D-213ENST00000455551 BLCAPP62952 87 aa9.34□□□□□ -0.91
SEMA4D-213ENST00000455551 SRSF2Q01130 221 aaKnown RBP9.34□□□□□ -0.91
SEMA4D-213ENST00000455551 IGSF10Q6WRI0 2623 aa9.34□□□□□ -0.91
SEMA4D-213ENST00000455551 ACACBO00763 2458 aa9.34□□□□□ -0.91
SEMA4D-213ENST00000455551 PF4V1P10720 104 aa9.34□□□□□ -0.91
SEMA4D-213ENST00000455551 HIST1H1AQ02539 215 aaPredicted RBP9.34□□□□□ -0.91
SEMA4D-213ENST00000455551 C19orf54Q5BKX5 351 aa9.34□□□□□ -0.91
SEMA4D-213ENST00000455551 CENPEQ02224 2701 aa9.34□□□□□ -0.91
SEMA4D-213ENST00000455551 ZFYVE26Q68DK2 2539 aa9.34□□□□□ -0.91
SEMA4D-213ENST00000455551 FAM223BA6NKX1 122 aa9.34□□□□□ -0.91
SEMA4D-213ENST00000455551 H3BVH4 76 aa9.34□□□□□ -0.91
SEMA4D-213ENST00000455551 FAM223AQ8IWN6 122 aa9.34□□□□□ -0.91
SEMA4D-213ENST00000455551 GLMPQ8WWB7 406 aa9.34□□□□□ -0.91
SEMA4D-213ENST00000455551 NAA38Q9BRA0 125 aaKnown RBP9.34□□□□□ -0.91
SEMA4D-213ENST00000455551 DKK2Q9UBU2 259 aa9.34□□□□□ -0.91
SEMA4D-213ENST00000455551 FAM208BQ5VWN6 2430 aa9.33□□□□□ -0.92
SEMA4D-213ENST00000455551 C2orf91Q6ZV80 131 aa9.33□□□□□ -0.92
SEMA4D-213ENST00000455551 C10orf105Q8TEF2 133 aa9.33□□□□□ -0.92
SEMA4D-213ENST00000455551 LGALS9BQ3B8N2 356 aa9.33□□□□□ -0.92
SEMA4D-213ENST00000455551 LGALS9CQ6DKI2 356 aa9.33□□□□□ -0.92
SEMA4D-213ENST00000455551 CLEC2AQ6UVW9 174 aa9.33□□□□□ -0.92
SEMA4D-213ENST00000455551 IGHV7-4-1A0A0J9YVY3 117 aa9.33□□□□□ -0.92
SEMA4D-213ENST00000455551 SPANXN1Q5VSR9 72 aa9.33□□□□□ -0.92
SEMA4D-213ENST00000455551 NRGNQ92686 78 aa9.33□□□□□ -0.92
SEMA4D-213ENST00000455551 PPBPP02775 128 aa9.32□□□□□ -0.92
SEMA4D-213ENST00000455551 C12orf54Q6X4T0 127 aa9.32□□□□□ -0.92
SEMA4D-213ENST00000455551 C9orf47Q6ZRZ4 202 aa9.32□□□□□ -0.92
SEMA4D-213ENST00000455551 F6UB75 175 aa9.32□□□□□ -0.92
SEMA4D-213ENST00000455551 GPHB5Q86YW7 130 aa9.32□□□□□ -0.92
SEMA4D-213ENST00000455551 TAX1BP3O14907 124 aa9.32□□□□□ -0.92
SEMA4D-213ENST00000455551 NMUP48645 174 aa9.32□□□□□ -0.92
SEMA4D-213ENST00000455551 SRD5A1P18405 259 aa9.31□□□□□ -0.92
SEMA4D-213ENST00000455551 TMEM95Q3KNT9 176 aa9.31□□□□□ -0.92
SEMA4D-213ENST00000455551 MRPL53Q96EL3 112 aaKnown RBP9.31□□□□□ -0.92
SEMA4D-213ENST00000455551 CBY1Q9Y3M2 126 aa9.31□□□□□ -0.92
SEMA4D-213ENST00000455551 C9orf139Q6ZV77 190 aa9.31□□□□□ -0.92
SEMA4D-213ENST00000455551 TMEM158Q8WZ71 300 aa9.31□□□□□ -0.92
SEMA4D-213ENST00000455551 MEGF9Q9H1U4 602 aa9.31□□□□□ -0.92
SEMA4D-213ENST00000455551 FGF6P10767 208 aa9.3□□□□□ -0.92
SEMA4D-213ENST00000455551 UBE2V1Q13404 147 aa9.3□□□□□ -0.92
SEMA4D-213ENST00000455551 SMIM15Q7Z3B0 74 aa9.3□□□□□ -0.92
SEMA4D-213ENST00000455551 OR4X2Q8NGF9 303 aa9.3□□□□□ -0.92
SEMA4D-213ENST00000455551 PRSS1P07477 247 aa9.3□□□□□ -0.92
SEMA4D-213ENST00000455551 KIR3DS1Q14943 382 aa9.3□□□□□ -0.92
SEMA4D-213ENST00000455551 OR2K2Q8NGT1 345 aa9.3□□□□□ -0.92
SEMA4D-213ENST00000455551 ZANQ9Y493 2812 aa9.3□□□□□ -0.92
SEMA4D-213ENST00000455551 M0R381 172 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms