RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 IGLC6P0CF74 106 aa1.45□□□□□ -2.18
HMGN3P1-201ENST00000453847 LINC00694P0DN24 101 aa1.45□□□□□ -2.18
HMGN3P1-201ENST00000453847 EVI2AP22794 236 aa1.45□□□□□ -2.18
HMGN3P1-201ENST00000453847 KDELR1P24390 212 aa1.45□□□□□ -2.18
HMGN3P1-201ENST00000453847 TEN1Q86WV5 123 aa1.45□□□□□ -2.18
HMGN3P1-201ENST00000453847 ARL17AQ8IVW1 177 aa1.45□□□□□ -2.18
HMGN3P1-201ENST00000453847 TCEAL4Q96EI5 215 aa1.45□□□□□ -2.18
HMGN3P1-201ENST00000453847 SNURFQ9Y675 71 aa1.45□□□□□ -2.18
HMGN3P1-201ENST00000453847 HELZP42694 1942 aaKnown RBP1.44□□□□□ -2.18
HMGN3P1-201ENST00000453847 KIDINS220Q9ULH0 1771 aa1.44□□□□□ -2.18
HMGN3P1-201ENST00000453847 SOGA1O94964 1423 aa1.44□□□□□ -2.18
HMGN3P1-201ENST00000453847 TRBV6-7A0A0A0MS04 114 aa1.44□□□□□ -2.18
HMGN3P1-201ENST00000453847 FAM236AA0A1B0GUQ0 79 aa1.44□□□□□ -2.18
HMGN3P1-201ENST00000453847 FAM236BA0A1B0GV22 79 aa1.44□□□□□ -2.18
HMGN3P1-201ENST00000453847 KLF7O75840 302 aaPredicted RBP1.44□□□□□ -2.18
HMGN3P1-201ENST00000453847 IGHV3-33P01772 117 aa1.44□□□□□ -2.18
HMGN3P1-201ENST00000453847 LYNX1P0DP58 116 aa1.44□□□□□ -2.18
HMGN3P1-201ENST00000453847 PCBD1P61457 104 aa1.44□□□□□ -2.18
HMGN3P1-201ENST00000453847 TSTD1Q8NFU3 115 aa1.44□□□□□ -2.18
HMGN3P1-201ENST00000453847 CIB3Q96Q77 187 aaPredicted RBP1.44□□□□□ -2.18
HMGN3P1-201ENST00000453847 LPAR5Q9H1C0 372 aa1.44□□□□□ -2.18
HMGN3P1-201ENST00000453847 LSM2Q9Y333 95 aaKnown RBP1.44□□□□□ -2.18
HMGN3P1-201ENST00000453847 IGKV2-40A0A087WW87 121 aaPredicted RBP1.43□□□□□ -2.18
HMGN3P1-201ENST00000453847 EDF1O60869 148 aaKnown RBP1.43□□□□□ -2.18
HMGN3P1-201ENST00000453847 PPYP01298 95 aa1.43□□□□□ -2.18
HMGN3P1-201ENST00000453847 IGKV2D-40P01614 121 aaPredicted RBP1.43□□□□□ -2.18
HMGN3P1-201ENST00000453847 IGLV3-1P01715 115 aa1.43□□□□□ -2.18
HMGN3P1-201ENST00000453847 COX4I1P13073 169 aa1.43□□□□□ -2.18
HMGN3P1-201ENST00000453847 NEDD8Q15843 81 aa1.43□□□□□ -2.18
HMGN3P1-201ENST00000453847 GDF5OSQ5U4N7 250 aa1.43□□□□□ -2.18
HMGN3P1-201ENST00000453847 LINC00322Q6ZN03 302 aaPredicted RBP1.43□□□□□ -2.18
HMGN3P1-201ENST00000453847 C10orf105Q8TEF2 133 aa1.43□□□□□ -2.18
HMGN3P1-201ENST00000453847 ZNF431Q8TF32 576 aaPredicted RBP1.43□□□□□ -2.18
HMGN3P1-201ENST00000453847 TPT1P8Q9HAU6 139 aa1.43□□□□□ -2.18
HMGN3P1-201ENST00000453847 LRP5O75197 1615 aa1.43□□□□□ -2.18
HMGN3P1-201ENST00000453847 MYO18AQ92614 2054 aaKnown RBP1.43□□□□□ -2.18
HMGN3P1-201ENST00000453847 MED13Q9UHV7 2174 aa1.42□□□□□ -2.18
HMGN3P1-201ENST00000453847 DISP2A7MBM2 1401 aa1.42□□□□□ -2.18
HMGN3P1-201ENST00000453847 A0A096LPI6 279 aa1.42□□□□□ -2.18
HMGN3P1-201ENST00000453847 IGKV2-29A2NJV5 120 aaPredicted RBP1.42□□□□□ -2.18
HMGN3P1-201ENST00000453847 CDC42EP2O14613 210 aa1.42□□□□□ -2.18
HMGN3P1-201ENST00000453847 HIST1H1BP16401 226 aaKnown RBP1.42□□□□□ -2.18
HMGN3P1-201ENST00000453847 ETV6P41212 452 aa1.42□□□□□ -2.18
HMGN3P1-201ENST00000453847 ASB16-AS1Q495Z4 193 aa1.42□□□□□ -2.18
HMGN3P1-201ENST00000453847 IZUMO2Q6UXV1 221 aa1.42□□□□□ -2.18
HMGN3P1-201ENST00000453847 KRTAP5-2Q701N4 177 aa1.42□□□□□ -2.18
HMGN3P1-201ENST00000453847 DEFB119Q8N690 84 aa1.42□□□□□ -2.18
HMGN3P1-201ENST00000453847 SLC35B3Q9H1N7 401 aa1.42□□□□□ -2.18
HMGN3P1-201ENST00000453847 PHLPP1O60346 1717 aa1.42□□□□□ -2.18
HMGN3P1-201ENST00000453847 CHD3Q12873 2000 aaKnown RBP1.42□□□□□ -2.18
HMGN3P1-201ENST00000453847 CCDC171Q6TFL3 1326 aa1.41□□□□□ -2.18
HMGN3P1-201ENST00000453847 PTPRGP23470 1445 aa1.41□□□□□ -2.18
HMGN3P1-201ENST00000453847 JMJD7-PLA2G4BH0Y9G9 81 aa1.41□□□□□ -2.18
HMGN3P1-201ENST00000453847 M0R129 80 aa1.41□□□□□ -2.18
HMGN3P1-201ENST00000453847 SMIM24O75264 130 aa1.41□□□□□ -2.18
HMGN3P1-201ENST00000453847 CKS2P33552 79 aa1.41□□□□□ -2.18
HMGN3P1-201ENST00000453847 CCDC58Q4VC31 144 aa1.41□□□□□ -2.18
HMGN3P1-201ENST00000453847 KRTAP5-7Q6L8G8 165 aa1.41□□□□□ -2.18
HMGN3P1-201ENST00000453847 C10orf111Q8N326 155 aa1.41□□□□□ -2.18
HMGN3P1-201ENST00000453847 C5orf17Q8NAS9 161 aa1.41□□□□□ -2.18
HMGN3P1-201ENST00000453847 MAGOHBQ96A72 148 aaKnown RBP1.41□□□□□ -2.18
HMGN3P1-201ENST00000453847 RP1L1Q8IWN7 2480 aaPredicted RBP1.41□□□□□ -2.18
HMGN3P1-201ENST00000453847 PEAK1Q9H792 1746 aa1.4□□□□□ -2.18
HMGN3P1-201ENST00000453847 TET1Q8NFU7 2136 aa1.4□□□□□ -2.18
HMGN3P1-201ENST00000453847 IGHV1-24A0A0C4DH33 117 aa1.4□□□□□ -2.19
HMGN3P1-201ENST00000453847 IFITM5A6NNB3 132 aa1.4□□□□□ -2.19
HMGN3P1-201ENST00000453847 M0R2Z0 102 aa1.4□□□□□ -2.19
HMGN3P1-201ENST00000453847 LSM3P62310 102 aaKnown RBP1.4□□□□□ -2.19
HMGN3P1-201ENST00000453847 CLLU1Q5K131 121 aa1.4□□□□□ -2.19
HMGN3P1-201ENST00000453847 CSAG1Q6PB30 78 aa1.4□□□□□ -2.19
HMGN3P1-201ENST00000453847 Q6ZSA8 131 aa1.4□□□□□ -2.19
HMGN3P1-201ENST00000453847 PFDN5Q99471 154 aa1.4□□□□□ -2.19
HMGN3P1-201ENST00000453847 TMEM14CQ9P0S9 112 aa1.4□□□□□ -2.19
HMGN3P1-201ENST00000453847 ERG28Q9UKR5 140 aa1.4□□□□□ -2.19
HMGN3P1-201ENST00000453847 DLG5Q8TDM6 1919 aa1.4□□□□□ -2.19
HMGN3P1-201ENST00000453847 ERCC6Q03468 1493 aa1.39□□□□□ -2.19
HMGN3P1-201ENST00000453847 MYH6P13533 1939 aa1.39□□□□□ -2.19
HMGN3P1-201ENST00000453847 MYH13Q9UKX3 1938 aa1.39□□□□□ -2.19
HMGN3P1-201ENST00000453847 A0A0J9YY99 117 aa1.39□□□□□ -2.19
HMGN3P1-201ENST00000453847 PNMA8CA0A1B0GUJ8 204 aa1.39□□□□□ -2.19
HMGN3P1-201ENST00000453847 IL9P15248 144 aa1.39□□□□□ -2.19
HMGN3P1-201ENST00000453847 RPS25P62851 125 aaKnown RBP1.39□□□□□ -2.19
HMGN3P1-201ENST00000453847 CCSMST1Q4G0I0 132 aa1.39□□□□□ -2.19
HMGN3P1-201ENST00000453847 WFDC10AQ9H1F0 79 aa1.39□□□□□ -2.19
HMGN3P1-201ENST00000453847 CASZ1Q86V15 1759 aa1.39□□□□□ -2.19
HMGN3P1-201ENST00000453847 ADGRB1O14514 1584 aa1.38□□□□□ -2.19
HMGN3P1-201ENST00000453847 TECTAO75443 2155 aa1.38□□□□□ -2.19
HMGN3P1-201ENST00000453847 PITX3O75364 302 aa1.38□□□□□ -2.19
HMGN3P1-201ENST00000453847 ADCYAP1P18509 176 aa1.38□□□□□ -2.19
HMGN3P1-201ENST00000453847 SBSPONQ8IVN8 264 aa1.38□□□□□ -2.19
HMGN3P1-201ENST00000453847 CTAGE3PQ8IX95 158 aa1.38□□□□□ -2.19
HMGN3P1-201ENST00000453847 TCTEX1D1Q8N7M0 179 aa1.38□□□□□ -2.19
HMGN3P1-201ENST00000453847 OR10AC1Q8NH08 325 aa1.38□□□□□ -2.19
HMGN3P1-201ENST00000453847 LINC00526Q96FQ7 95 aa1.38□□□□□ -2.19
HMGN3P1-201ENST00000453847 SMIM7Q9BQ49 75 aa1.38□□□□□ -2.19
HMGN3P1-201ENST00000453847 PRRC2BQ5JSZ5 2229 aaKnown RBP1.38□□□□□ -2.19
HMGN3P1-201ENST00000453847 NCOA6Q14686 2063 aaPredicted RBP1.37□□□□□ -2.19
HMGN3P1-201ENST00000453847 ZNF670-ZNF695F2Z2N8 137 aa1.37□□□□□ -2.19
HMGN3P1-201ENST00000453847 NPFFO15130 113 aa1.37□□□□□ -2.19
HMGN3P1-201ENST00000453847 NCR2O95944 276 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms