RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 CLEC19AQ6UXS0 136 aa10.87□□□□□ -0.67
UBE2D3-210ENST00000453744 DTX2Q86UW9 622 aa10.87□□□□□ -0.67
UBE2D3-210ENST00000453744 C16orf92Q96LL3 132 aa10.87□□□□□ -0.67
UBE2D3-210ENST00000453744 A0A096LNJ9 63 aa10.87□□□□□ -0.67
UBE2D3-210ENST00000453744 INS-IGF2F8WCM5 200 aa10.87□□□□□ -0.67
UBE2D3-210ENST00000453744 ATP5G2Q06055 141 aa10.87□□□□□ -0.67
UBE2D3-210ENST00000453744 CD300EQ496F6 205 aaPredicted RBP10.87□□□□□ -0.67
UBE2D3-210ENST00000453744 FAM57AQ8TBR7 257 aa10.87□□□□□ -0.67
UBE2D3-210ENST00000453744 PGPEP1Q9NXJ5 209 aa10.87□□□□□ -0.67
UBE2D3-210ENST00000453744 CEND1Q8N111 149 aa10.87□□□□□ -0.67
UBE2D3-210ENST00000453744 SORL1Q92673 2214 aa10.87□□□□□ -0.67
UBE2D3-210ENST00000453744 LAGE3Q14657 143 aa10.86□□□□□ -0.67
UBE2D3-210ENST00000453744 SIVA1O15304 175 aa10.86□□□□□ -0.67
UBE2D3-210ENST00000453744 HOXA3O43365 443 aaPredicted RBP10.86□□□□□ -0.67
UBE2D3-210ENST00000453744 GLMPQ8WWB7 406 aa10.86□□□□□ -0.67
UBE2D3-210ENST00000453744 NDUFS8O00217 210 aa10.86□□□□□ -0.67
UBE2D3-210ENST00000453744 DLX6P56179 175 aa10.86□□□□□ -0.67
UBE2D3-210ENST00000453744 UFSP1Q6NVU6 142 aa10.86□□□□□ -0.67
UBE2D3-210ENST00000453744 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.85□□□□□ -0.67
UBE2D3-210ENST00000453744 ZNF815PA8K554 130 aa10.85□□□□□ -0.67
UBE2D3-210ENST00000453744 E7EQL1 145 aa10.85□□□□□ -0.67
UBE2D3-210ENST00000453744 C12orf74Q32Q52 190 aa10.85□□□□□ -0.67
UBE2D3-210ENST00000453744 LINC00574Q9H8X3 128 aa10.85□□□□□ -0.67
UBE2D3-210ENST00000453744 LINC00527Q9UJ94 153 aa10.85□□□□□ -0.67
UBE2D3-210ENST00000453744 PHLDA3Q9Y5J5 127 aa10.85□□□□□ -0.67
UBE2D3-210ENST00000453744 NDPQ00604 133 aa10.85□□□□□ -0.67
UBE2D3-210ENST00000453744 ODF1Q14990 250 aa10.85□□□□□ -0.67
UBE2D3-210ENST00000453744 NUP37Q8NFH4 326 aa10.85□□□□□ -0.67
UBE2D3-210ENST00000453744 ZNF562Q6V9R5 426 aa10.85□□□□□ -0.67
UBE2D3-210ENST00000453744 DYNAPQ8N1N2 210 aa10.85□□□□□ -0.67
UBE2D3-210ENST00000453744 CHTOPQ9Y3Y2 248 aaKnown RBP10.85□□□□□ -0.67
UBE2D3-210ENST00000453744 IGLL5B9A064 214 aa10.84□□□□□ -0.67
UBE2D3-210ENST00000453744 PRAC2D3DTV9 90 aa10.84□□□□□ -0.67
UBE2D3-210ENST00000453744 ABHD17AQ96GS6 310 aa10.84□□□□□ -0.67
UBE2D3-210ENST00000453744 ZNF462Q96JM2 2506 aa10.84□□□□□ -0.67
UBE2D3-210ENST00000453744 DCHS1Q96JQ0 3298 aa10.84□□□□□ -0.67
UBE2D3-210ENST00000453744 ASPMQ8IZT6 3477 aa10.84□□□□□ -0.67
UBE2D3-210ENST00000453744 TRGV3P03979 118 aa10.84□□□□□ -0.67
UBE2D3-210ENST00000453744 SRSF1Q07955 248 aaKnown RBP eCLIP10.84□□□□□ -0.672e-8■□□□□ 10.6
UBE2D3-210ENST00000453744 C5orf64Q2M2E5 130 aa10.84□□□□□ -0.67
UBE2D3-210ENST00000453744 RAB9AP51151 201 aa10.84□□□□□ -0.67
UBE2D3-210ENST00000453744 TMEM170BQ5T4T1 132 aa10.84□□□□□ -0.67
UBE2D3-210ENST00000453744 BEX4Q9NWD9 120 aaPredicted RBP10.84□□□□□ -0.67
UBE2D3-210ENST00000453744 PDE6HQ13956 83 aa10.83□□□□□ -0.68
UBE2D3-210ENST00000453744 C15orf32Q32M92 178 aa10.83□□□□□ -0.68
UBE2D3-210ENST00000453744 TNFRSF14Q92956 283 aa10.83□□□□□ -0.68
UBE2D3-210ENST00000453744 JMJD1CQ15652 2540 aa10.83□□□□□ -0.68
UBE2D3-210ENST00000453744 C2CD3Q4AC94 2353 aa10.83□□□□□ -0.68
UBE2D3-210ENST00000453744 TMEM238LA0A1B0GVL6 79 aa10.83□□□□□ -0.68
UBE2D3-210ENST00000453744 A6NJY4 79 aa10.83□□□□□ -0.68
UBE2D3-210ENST00000453744 DPF1Q92782 380 aa10.83□□□□□ -0.68
UBE2D3-210ENST00000453744 LINC01549A6NIU2 74 aa10.82□□□□□ -0.68
UBE2D3-210ENST00000453744 NEGR1Q7Z3B1 354 aa10.82□□□□□ -0.68
UBE2D3-210ENST00000453744 C14orf178Q8N769 122 aaPredicted RBP10.82□□□□□ -0.68
UBE2D3-210ENST00000453744 SYT8Q8NBV8 401 aa10.82□□□□□ -0.68
UBE2D3-210ENST00000453744 CFHR4Q92496 578 aa10.82□□□□□ -0.68
UBE2D3-210ENST00000453744 FCN3O75636 299 aa10.82□□□□□ -0.68
UBE2D3-210ENST00000453744 ZNF493Q6ZR52 646 aa10.82□□□□□ -0.68
UBE2D3-210ENST00000453744 METTL26Q96S19 204 aa10.82□□□□□ -0.68
UBE2D3-210ENST00000453744 SMPXQ9UHP9 88 aa10.82□□□□□ -0.68
UBE2D3-210ENST00000453744 IGHV3OR16-10A0A075B7F0 116 aa10.82□□□□□ -0.68
UBE2D3-210ENST00000453744 B9A039 149 aa10.82□□□□□ -0.68
UBE2D3-210ENST00000453744 MAPKAPK5-AS1Q8N8E1 139 aa10.82□□□□□ -0.68
UBE2D3-210ENST00000453744 DMDP11532 3685 aa10.81□□□□□ -0.68
UBE2D3-210ENST00000453744 FOXI2Q6ZQN5 318 aa10.81□□□□□ -0.68
UBE2D3-210ENST00000453744 F8W1H4 67 aa10.81□□□□□ -0.68
UBE2D3-210ENST00000453744 FAM74A4Q5TZK3 123 aa10.81□□□□□ -0.68
UBE2D3-210ENST00000453744 Q8N8P6 123 aa10.81□□□□□ -0.68
UBE2D3-210ENST00000453744 ATP6V0BQ99437 205 aa10.81□□□□□ -0.68
UBE2D3-210ENST00000453744 SPAG8Q99932 426 aaPredicted RBP10.81□□□□□ -0.68
UBE2D3-210ENST00000453744 TNRC18O15417 2968 aaPredicted RBP10.81□□□□□ -0.68
UBE2D3-210ENST00000453744 SPINK8P0C7L1 97 aa10.81□□□□□ -0.68
UBE2D3-210ENST00000453744 ZNF672Q499Z4 452 aaPredicted RBP10.81□□□□□ -0.68
UBE2D3-210ENST00000453744 IGLV1-47P01700 117 aa10.8□□□□□ -0.68
UBE2D3-210ENST00000453744 HLA-DRB4P13762 266 aa10.8□□□□□ -0.68
UBE2D3-210ENST00000453744 HLA-DRB4X5D2U9 266 aa10.8□□□□□ -0.68
UBE2D3-210ENST00000453744 INSL3P51460 131 aa10.8□□□□□ -0.68
UBE2D3-210ENST00000453744 HERVK_113P61574 105 aa10.8□□□□□ -0.68
UBE2D3-210ENST00000453744 CCDC144NLQ6NUI1 221 aa10.8□□□□□ -0.68
UBE2D3-210ENST00000453744 PIP4P2Q8N4L2 257 aa10.8□□□□□ -0.68
UBE2D3-210ENST00000453744 USP9YO00507 2555 aaPredicted RBP10.8□□□□□ -0.68
UBE2D3-210ENST00000453744 IGHV3-64A0A075B6Q5 118 aa10.79□□□□□ -0.68
UBE2D3-210ENST00000453744 C20orf78Q9BR46 151 aa10.79□□□□□ -0.68
UBE2D3-210ENST00000453744 RAI1Q7Z5J4 1906 aaPredicted RBP10.79□□□□□ -0.68
UBE2D3-210ENST00000453744 H7C1H1 209 aa10.79□□□□□ -0.68
UBE2D3-210ENST00000453744 THBDP07204 575 aa10.79□□□□□ -0.68
UBE2D3-210ENST00000453744 SLC25A16P16260 332 aa10.79□□□□□ -0.68
UBE2D3-210ENST00000453744 C3orf36Q3SXR2 165 aa10.79□□□□□ -0.68
UBE2D3-210ENST00000453744 Q6ZS92 163 aa10.79□□□□□ -0.68
UBE2D3-210ENST00000453744 PSMG4Q5JS54 123 aa10.79□□□□□ -0.68
UBE2D3-210ENST00000453744 PTH2Q96A98 100 aa10.79□□□□□ -0.68
UBE2D3-210ENST00000453744 HTN1P15515 57 aa10.78□□□□□ -0.68
UBE2D3-210ENST00000453744 CEACAM4O75871 244 aa10.78□□□□□ -0.68
UBE2D3-210ENST00000453744 LYRM7Q5U5X0 104 aa10.78□□□□□ -0.68
UBE2D3-210ENST00000453744 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.78□□□□□ -0.68
UBE2D3-210ENST00000453744 DMXL2Q8TDJ6 3036 aa10.78□□□□□ -0.68
UBE2D3-210ENST00000453744 IGKV3-20P01619 116 aa10.78□□□□□ -0.68
UBE2D3-210ENST00000453744 PLNP26678 52 aa10.78□□□□□ -0.68
UBE2D3-210ENST00000453744 PRR30Q53SZ7 412 aaPredicted RBP10.78□□□□□ -0.68
UBE2D3-210ENST00000453744 PRADC1Q9BSG0 188 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms