RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 C1orf134Q5TEV5 83 aa9.73□□□□□ -0.85
RFTN1-207ENST00000453536 HSD17B11Q8NBQ5 300 aa9.73□□□□□ -0.85
RFTN1-207ENST00000453536 SH3BGRL3Q9H299 93 aa9.73□□□□□ -0.85
RFTN1-207ENST00000453536 IGHV1OR15-1A0A075B7D0 117 aa9.72□□□□□ -0.85
RFTN1-207ENST00000453536 RGS13O14921 159 aa9.72□□□□□ -0.85
RFTN1-207ENST00000453536 SPINK4O60575 86 aa9.72□□□□□ -0.85
RFTN1-207ENST00000453536 SFTA3P0C7M3 94 aa9.72□□□□□ -0.85
RFTN1-207ENST00000453536 TCL1AP56279 114 aa9.72□□□□□ -0.85
RFTN1-207ENST00000453536 DAZ2Q13117 558 aaKnown RBP9.72□□□□□ -0.85
RFTN1-207ENST00000453536 SCGB1C1Q8TD33 95 aa9.72□□□□□ -0.85
RFTN1-207ENST00000453536 RXFP4Q8TDU9 374 aa9.72□□□□□ -0.85
RFTN1-207ENST00000453536 TRGV2A0A075B6R0 118 aa9.71□□□□□ -0.86
RFTN1-207ENST00000453536 IFNA5P01569 189 aa9.71□□□□□ -0.86
RFTN1-207ENST00000453536 FUSP35637 526 aaKnown RBP eCLIP9.71□□□□□ -0.86
RFTN1-207ENST00000453536 ANXA2RQ3ZCQ2 193 aa9.71□□□□□ -0.86
RFTN1-207ENST00000453536 KHDC3LQ587J8 217 aa9.71□□□□□ -0.86
RFTN1-207ENST00000453536 KRTAP4-5Q9BYR2 181 aa9.71□□□□□ -0.86
RFTN1-207ENST00000453536 PGPA6NDG6 321 aa9.7□□□□□ -0.86
RFTN1-207ENST00000453536 PET100P0DJ07 73 aa9.7□□□□□ -0.86
RFTN1-207ENST00000453536 ARL14EPLP0DKL9 152 aa9.7□□□□□ -0.86
RFTN1-207ENST00000453536 CCL18P55774 89 aa9.7□□□□□ -0.86
RFTN1-207ENST00000453536 GOLT1AQ6ZVE7 132 aa9.7□□□□□ -0.86
RFTN1-207ENST00000453536 LINC00467Q9BRT7 94 aa9.7□□□□□ -0.86
RFTN1-207ENST00000453536 KCNIP2Q9NS61 270 aa9.7□□□□□ -0.86
RFTN1-207ENST00000453536 NAGKQ9UJ70 344 aa9.7□□□□□ -0.86
RFTN1-207ENST00000453536 G3V3Q6 166 aa9.69□□□□□ -0.86
RFTN1-207ENST00000453536 GNRH2O43555 120 aa9.69□□□□□ -0.86
RFTN1-207ENST00000453536 ATP6V0CP27449 155 aa9.69□□□□□ -0.86
RFTN1-207ENST00000453536 TMEM183BQ1AE95 376 aa9.69□□□□□ -0.86
RFTN1-207ENST00000453536 TMEM183AQ8IXX5 376 aa9.69□□□□□ -0.86
RFTN1-207ENST00000453536 C6orf223Q8N319 242 aa9.69□□□□□ -0.86
RFTN1-207ENST00000453536 ZNF680Q8NEM1 530 aa9.69□□□□□ -0.86
RFTN1-207ENST00000453536 OR10G4Q8NGN3 311 aa9.69□□□□□ -0.86
RFTN1-207ENST00000453536 OR10G9Q8NGN4 311 aa9.69□□□□□ -0.86
RFTN1-207ENST00000453536 OR10G7Q8NGN6 311 aa9.69□□□□□ -0.86
RFTN1-207ENST00000453536 C8orf49Q96NF6 230 aa9.69□□□□□ -0.86
RFTN1-207ENST00000453536 Q9H8V8 135 aa9.69□□□□□ -0.86
RFTN1-207ENST00000453536 BATF3Q9NR55 127 aa9.69□□□□□ -0.86
RFTN1-207ENST00000453536 TNFRSF18Q9Y5U5 241 aa9.69□□□□□ -0.86
RFTN1-207ENST00000453536 RNF222A6NCQ9 220 aa9.68□□□□□ -0.86
RFTN1-207ENST00000453536 SMLR1H3BR10 107 aa9.68□□□□□ -0.86
RFTN1-207ENST00000453536 ZNF80P51504 273 aaPredicted RBP9.68□□□□□ -0.86
RFTN1-207ENST00000453536 ZNF266Q14584 549 aa9.68□□□□□ -0.86
RFTN1-207ENST00000453536 TMEM75Q8N9X5 138 aa9.68□□□□□ -0.86
RFTN1-207ENST00000453536 ZNF479Q96JC4 524 aa9.68□□□□□ -0.86
RFTN1-207ENST00000453536 ARPC5LQ9BPX5 153 aa9.68□□□□□ -0.86
RFTN1-207ENST00000453536 MED28Q9H204 178 aa9.68□□□□□ -0.86
RFTN1-207ENST00000453536 C11orf21Q9P2W6 132 aa9.68□□□□□ -0.86
RFTN1-207ENST00000453536 LOC100131303A0A0U1RQF7 123 aa9.67□□□□□ -0.86
RFTN1-207ENST00000453536 PTTG1O95997 202 aa9.67□□□□□ -0.86
RFTN1-207ENST00000453536 FHL2Q14192 279 aa9.67□□□□□ -0.86
RFTN1-207ENST00000453536 ACOT6Q3I5F7 207 aaPredicted RBP9.67□□□□□ -0.86
RFTN1-207ENST00000453536 RPL7L1Q6DKI1 246 aaKnown RBP9.67□□□□□ -0.86
RFTN1-207ENST00000453536 ST6GAL2Q96JF0 529 aa9.67□□□□□ -0.86
RFTN1-207ENST00000453536 OTORQ9NRC9 128 aa9.67□□□□□ -0.86
RFTN1-207ENST00000453536 RBAKDNA6NC62 111 aa9.66□□□□□ -0.86
RFTN1-207ENST00000453536 CSN1S1P47710 185 aa9.66□□□□□ -0.86
RFTN1-207ENST00000453536 CDC34P49427 236 aaPredicted RBP9.66□□□□□ -0.86
RFTN1-207ENST00000453536 TAS2R45P59539 299 aa9.66□□□□□ -0.86
RFTN1-207ENST00000453536 ZNF726P1Q15940 193 aa9.66□□□□□ -0.86
RFTN1-207ENST00000453536 IBA57Q5T440 356 aaKnown RBP9.66□□□□□ -0.86
RFTN1-207ENST00000453536 Q6AWC8 147 aa9.66□□□□□ -0.86
RFTN1-207ENST00000453536 RAB24Q969Q5 203 aa9.66□□□□□ -0.86
RFTN1-207ENST00000453536 AQP10Q96PS8 301 aa9.66□□□□□ -0.86
RFTN1-207ENST00000453536 MRPS16Q9Y3D3 137 aaKnown RBP9.66□□□□□ -0.86
RFTN1-207ENST00000453536 FXYD6-FXYD2A0A087WZ82 144 aa9.65□□□□□ -0.86
RFTN1-207ENST00000453536 A0A1W2PPV4 95 aa9.65□□□□□ -0.86
RFTN1-207ENST00000453536 GGTLC3B5MD39 225 aa9.65□□□□□ -0.86
RFTN1-207ENST00000453536 TYMSP04818 313 aa9.65□□□□□ -0.86
RFTN1-207ENST00000453536 NMBP08949 121 aa9.65□□□□□ -0.86
RFTN1-207ENST00000453536 STAG3L2P0CL84 134 aa9.65□□□□□ -0.86
RFTN1-207ENST00000453536 STAG3L3P0CL85 134 aa9.65□□□□□ -0.86
RFTN1-207ENST00000453536 GCHFRP30047 84 aa9.65□□□□□ -0.86
RFTN1-207ENST00000453536 FAM3BP58499 235 aaPredicted RBP9.65□□□□□ -0.86
RFTN1-207ENST00000453536 ZNF415Q09FC8 603 aa9.65□□□□□ -0.86
RFTN1-207ENST00000453536 LYPD1Q8N2G4 141 aa9.65□□□□□ -0.86
RFTN1-207ENST00000453536 C18orf15Q96N68 181 aa9.65□□□□□ -0.86
RFTN1-207ENST00000453536 IGHV3-16A0A0C4DH30 117 aa9.64□□□□□ -0.87
RFTN1-207ENST00000453536 PAX4O43316 350 aa9.64□□□□□ -0.87
RFTN1-207ENST00000453536 IGLV2-11P01706 119 aa9.64□□□□□ -0.87
RFTN1-207ENST00000453536 CRYBA4P53673 196 aa9.64□□□□□ -0.87
RFTN1-207ENST00000453536 KRTAP10-2P60368 255 aa9.64□□□□□ -0.87
RFTN1-207ENST00000453536 LINC00479Q96M42 142 aa9.64□□□□□ -0.87
RFTN1-207ENST00000453536 FGF8P55075 233 aaPredicted RBP9.63□□□□□ -0.87
RFTN1-207ENST00000453536 SOHLH1Q5JUK2 328 aa9.63□□□□□ -0.87
RFTN1-207ENST00000453536 DPPA3Q6W0C5 159 aa9.63□□□□□ -0.87
RFTN1-207ENST00000453536 PQLC2Q6ZP29 291 aa9.63□□□□□ -0.87
RFTN1-207ENST00000453536 OR2G3Q8NGZ4 309 aa9.63□□□□□ -0.87
RFTN1-207ENST00000453536 CMTM2Q8TAZ6 248 aa9.63□□□□□ -0.87
RFTN1-207ENST00000453536 UPK3BQ9BT76 320 aa9.63□□□□□ -0.87
RFTN1-207ENST00000453536 TREM1Q9NP99 234 aa9.63□□□□□ -0.87
RFTN1-207ENST00000453536 TRAV34A0A0B4J273 112 aa9.62□□□□□ -0.87
RFTN1-207ENST00000453536 NXPH4O95158 308 aa9.62□□□□□ -0.87
RFTN1-207ENST00000453536 GIPP09681 153 aaPredicted RBP9.62□□□□□ -0.87
RFTN1-207ENST00000453536 MED14OSP0DP75 135 aa9.62□□□□□ -0.87
RFTN1-207ENST00000453536 LINC00315P59091 139 aa9.62□□□□□ -0.87
RFTN1-207ENST00000453536 WFDC10BQ8IUB3 73 aa9.62□□□□□ -0.87
RFTN1-207ENST00000453536 IQCF2Q8IXL9 164 aa9.62□□□□□ -0.87
RFTN1-207ENST00000453536 TNFSF18Q9UNG2 199 aa9.62□□□□□ -0.87
RFTN1-207ENST00000453536 TRBV7-9A0A0J9YWB2 115 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms