RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 GOLT1AQ6ZVE7 132 aa6.33□□□□□ -1.4
COL28A1-205ENST00000453441 TMEM75Q8N9X5 138 aa6.33□□□□□ -1.4
COL28A1-205ENST00000453441 IL17DQ8TAD2 202 aa6.33□□□□□ -1.4
COL28A1-205ENST00000453441 TMEM208Q9BTX3 173 aa6.33□□□□□ -1.4
COL28A1-205ENST00000453441 C11orf68Q9H3H3 251 aaKnown RBP6.33□□□□□ -1.4
COL28A1-205ENST00000453441 TMPRSS5Q9H3S3 457 aa6.33□□□□□ -1.4
COL28A1-205ENST00000453441 YTHDF2Q9Y5A9 579 aaKnown RBP6.33□□□□□ -1.4
COL28A1-205ENST00000453441 COL7A1Q02388 2944 aa6.32□□□□□ -1.4
COL28A1-205ENST00000453441 TENM3Q9P273 2699 aa6.32□□□□□ -1.4
COL28A1-205ENST00000453441 TRBV6-1A0A0K0K1D8 114 aa6.32□□□□□ -1.4
COL28A1-205ENST00000453441 TEX48A0A1B0GUV7 120 aa6.32□□□□□ -1.4
COL28A1-205ENST00000453441 C7orf71A4D174 169 aa6.32□□□□□ -1.4
COL28A1-205ENST00000453441 H7BYZ3 331 aa6.32□□□□□ -1.4
COL28A1-205ENST00000453441 M0R2Z0 102 aa6.32□□□□□ -1.4
COL28A1-205ENST00000453441 PEX7O00628 323 aa6.32□□□□□ -1.4
COL28A1-205ENST00000453441 CRXO43186 299 aaPredicted RBP6.32□□□□□ -1.4
COL28A1-205ENST00000453441 PAGE4O60829 102 aa6.32□□□□□ -1.4
COL28A1-205ENST00000453441 GPX1P07203 203 aa6.32□□□□□ -1.4
COL28A1-205ENST00000453441 UBE2G2P60604 165 aa6.32□□□□□ -1.4
COL28A1-205ENST00000453441 ERCC8Q13216 396 aa6.32□□□□□ -1.4
COL28A1-205ENST00000453441 SAPCD1Q5SSQ6 148 aa6.32□□□□□ -1.4
COL28A1-205ENST00000453441 TEX261Q6UWH6 196 aa6.32□□□□□ -1.4
COL28A1-205ENST00000453441 CCDC28AQ8IWP9 274 aa6.32□□□□□ -1.4
COL28A1-205ENST00000453441 FMC1Q96HJ9 113 aa6.32□□□□□ -1.4
COL28A1-205ENST00000453441 VGLL1Q99990 258 aa6.32□□□□□ -1.4
COL28A1-205ENST00000453441 NIPSNAP3BQ9BS92 247 aa6.32□□□□□ -1.4
COL28A1-205ENST00000453441 RETNQ9HD89 108 aa6.32□□□□□ -1.4
COL28A1-205ENST00000453441 RPH3ALQ9UNE2 315 aa6.32□□□□□ -1.4
COL28A1-205ENST00000453441 C11orf94C9JXX5 98 aa6.31□□□□□ -1.4
COL28A1-205ENST00000453441 PDE6DO43924 150 aa6.31□□□□□ -1.4
COL28A1-205ENST00000453441 NDUFS6O75380 124 aaKnown RBP6.31□□□□□ -1.4
COL28A1-205ENST00000453441 FXYD7P58549 80 aa6.31□□□□□ -1.4
COL28A1-205ENST00000453441 TAS2R60P59551 318 aa6.31□□□□□ -1.4
COL28A1-205ENST00000453441 FLI1Q01543 452 aaPredicted RBP6.31□□□□□ -1.4
COL28A1-205ENST00000453441 RRN3P1Q2M238 152 aa6.31□□□□□ -1.4
COL28A1-205ENST00000453441 GFI1BQ5VTD9 330 aa6.31□□□□□ -1.4
COL28A1-205ENST00000453441 ZNF493Q6ZR52 646 aa6.31□□□□□ -1.4
COL28A1-205ENST00000453441 LYPD6BQ8NI32 183 aa6.31□□□□□ -1.4
COL28A1-205ENST00000453441 WWC2-AS2Q96NR7 200 aa6.31□□□□□ -1.4
COL28A1-205ENST00000453441 PYGO2Q9BRQ0 406 aa6.31□□□□□ -1.4
COL28A1-205ENST00000453441 LINC00467Q9BRT7 94 aa6.31□□□□□ -1.4
COL28A1-205ENST00000453441 GNG13Q9P2W3 67 aa6.31□□□□□ -1.4
COL28A1-205ENST00000453441 PSG8Q9UQ74 426 aa6.31□□□□□ -1.4
COL28A1-205ENST00000453441 KLF12Q9Y4X4 402 aa6.31□□□□□ -1.4
COL28A1-205ENST00000453441 TRAV12-2A0A075B6T6 113 aa6.3□□□□□ -1.4
COL28A1-205ENST00000453441 A0A1B0GV50 99 aa6.3□□□□□ -1.4
COL28A1-205ENST00000453441 BCL2P10415 239 aa6.3□□□□□ -1.4
COL28A1-205ENST00000453441 AKR1C3P42330 323 aa6.3□□□□□ -1.4
COL28A1-205ENST00000453441 UBE2G1P62253 170 aa6.3□□□□□ -1.4
COL28A1-205ENST00000453441 GNG5P63218 68 aa6.3□□□□□ -1.4
COL28A1-205ENST00000453441 MEF2BQ02080 365 aaPredicted RBP6.3□□□□□ -1.4
COL28A1-205ENST00000453441 Q6AWC8 147 aa6.3□□□□□ -1.4
COL28A1-205ENST00000453441 C1orf158Q8N1D5 194 aa6.3□□□□□ -1.4
COL28A1-205ENST00000453441 ZFAND2AQ8N6M9 145 aa6.3□□□□□ -1.4
COL28A1-205ENST00000453441 Q8NAQ8 132 aa6.3□□□□□ -1.4
COL28A1-205ENST00000453441 ZNF680Q8NEM1 530 aa6.3□□□□□ -1.4
COL28A1-205ENST00000453441 LINC01587Q99440 93 aa6.3□□□□□ -1.4
COL28A1-205ENST00000453441 EDA2RQ9HAV5 297 aa6.3□□□□□ -1.4
COL28A1-205ENST00000453441 TREM1Q9NP99 234 aa6.3□□□□□ -1.4
COL28A1-205ENST00000453441 VAX2Q9UIW0 290 aa6.3□□□□□ -1.4
COL28A1-205ENST00000453441 ZFP30Q9Y2G7 519 aa6.3□□□□□ -1.4
COL28A1-205ENST00000453441 IGHV4-28A0A0C4DH34 117 aa6.29□□□□□ -1.4
COL28A1-205ENST00000453441 RNASE4P34096 147 aaKnown RBP6.29□□□□□ -1.4
COL28A1-205ENST00000453441 ATP5G3P48201 142 aa6.29□□□□□ -1.4
COL28A1-205ENST00000453441 CCL20P78556 96 aa6.29□□□□□ -1.4
COL28A1-205ENST00000453441 TMEM183BQ1AE95 376 aa6.29□□□□□ -1.4
COL28A1-205ENST00000453441 COX8CQ7Z4L0 72 aa6.29□□□□□ -1.4
COL28A1-205ENST00000453441 Q86TA4 180 aa6.29□□□□□ -1.4
COL28A1-205ENST00000453441 Q8TAT8 98 aa6.29□□□□□ -1.4
COL28A1-205ENST00000453441 C11orf52Q96A22 123 aa6.29□□□□□ -1.4
COL28A1-205ENST00000453441 C16orf74Q96GX8 76 aa6.29□□□□□ -1.4
COL28A1-205ENST00000453441 IGHV3OR16-12A0A075B7B8 117 aa6.28□□□□□ -1.4
COL28A1-205ENST00000453441 TRAV8-1A0A0A6YYK1 113 aa6.28□□□□□ -1.4
COL28A1-205ENST00000453441 TRAV12-3A0A0B4J271 114 aa6.28□□□□□ -1.4
COL28A1-205ENST00000453441 TRAV21A0A0B4J279 112 aa6.28□□□□□ -1.4
COL28A1-205ENST00000453441 LOC102723971A0A1B0GUV8 181 aa6.28□□□□□ -1.4
COL28A1-205ENST00000453441 C9orf118A6NHY6 69 aa6.28□□□□□ -1.4
COL28A1-205ENST00000453441 ZNF324O75467 553 aaPredicted RBP6.28□□□□□ -1.4
COL28A1-205ENST00000453441 IGLV2-11P01706 119 aa6.28□□□□□ -1.4
COL28A1-205ENST00000453441 RAB14P61106 215 aa6.28□□□□□ -1.4
COL28A1-205ENST00000453441 ANXA2RQ3ZCQ2 193 aa6.28□□□□□ -1.4
COL28A1-205ENST00000453441 SMUG1Q53HV7 270 aa6.28□□□□□ -1.4
COL28A1-205ENST00000453441 ZNF767PQ75MW2 155 aa6.28□□□□□ -1.4
COL28A1-205ENST00000453441 PRNTQ86SH4 94 aa6.28□□□□□ -1.4
COL28A1-205ENST00000453441 EIF4E3Q8N5X7 224 aaKnown RBP6.28□□□□□ -1.4
COL28A1-205ENST00000453441 C2CD4CQ8TF44 421 aa6.28□□□□□ -1.4
COL28A1-205ENST00000453441 TMEM263Q8WUH6 116 aaKnown RBP6.28□□□□□ -1.4
COL28A1-205ENST00000453441 SMIM12Q96EX1 92 aa6.28□□□□□ -1.4
COL28A1-205ENST00000453441 KCNS1Q96KK3 526 aa6.28□□□□□ -1.4
COL28A1-205ENST00000453441 IGHV1OR15-1A0A075B7D0 117 aa6.27□□□□□ -1.41
COL28A1-205ENST00000453441 A0A0J9YWU9 116 aa6.27□□□□□ -1.41
COL28A1-205ENST00000453441 RBFOX3A6NFN3 312 aa6.27□□□□□ -1.41
COL28A1-205ENST00000453441 LYRM9A8MSI8 78 aa6.27□□□□□ -1.41
COL28A1-205ENST00000453441 TMEM250H0YL14 139 aa6.27□□□□□ -1.41
COL28A1-205ENST00000453441 J3KRW8 73 aa6.27□□□□□ -1.41
COL28A1-205ENST00000453441 LTAP01374 205 aa6.27□□□□□ -1.41
COL28A1-205ENST00000453441 SPART-AS1P0CW21 52 aa6.27□□□□□ -1.41
COL28A1-205ENST00000453441 RBMY1A1P0DJD3 496 aaKnown RBP6.27□□□□□ -1.41
COL28A1-205ENST00000453441 RBMY1CP0DJD4 496 aa6.27□□□□□ -1.41
COL28A1-205ENST00000453441 BTN1A1Q13410 526 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms