RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 ZFP30Q9Y2G7 519 aa8.44□□□□□ -1.06
SCN9A-204ENST00000452182 TRAV34A0A0B4J273 112 aa8.43□□□□□ -1.06
SCN9A-204ENST00000452182 INSP01308 110 aa8.43□□□□□ -1.06
SCN9A-204ENST00000452182 LTAP01374 205 aa8.43□□□□□ -1.06
SCN9A-204ENST00000452182 TAS2R60P59551 318 aa8.43□□□□□ -1.06
SCN9A-204ENST00000452182 COX8CQ7Z4L0 72 aa8.43□□□□□ -1.06
SCN9A-204ENST00000452182 PRNTQ86SH4 94 aa8.43□□□□□ -1.06
SCN9A-204ENST00000452182 Q86TA4 180 aa8.43□□□□□ -1.06
SCN9A-204ENST00000452182 RNF183Q96D59 192 aa8.43□□□□□ -1.06
SCN9A-204ENST00000452182 TVP23CQ96ET8 276 aa8.43□□□□□ -1.06
SCN9A-204ENST00000452182 SPATA25Q9BR10 227 aa8.43□□□□□ -1.06
SCN9A-204ENST00000452182 MED9Q9NWA0 146 aa8.43□□□□□ -1.06
SCN9A-204ENST00000452182 TRAV12-2A0A075B6T6 113 aa8.43□□□□□ -1.06
SCN9A-204ENST00000452182 RAB19A4D1S5 217 aa8.43□□□□□ -1.06
SCN9A-204ENST00000452182 GPX1P07203 203 aa8.43□□□□□ -1.06
SCN9A-204ENST00000452182 NHLRC4P0CG21 123 aaPredicted RBP8.43□□□□□ -1.06
SCN9A-204ENST00000452182 RPL35P42766 123 aaKnown RBP8.43□□□□□ -1.06
SCN9A-204ENST00000452182 PEA15Q15121 130 aa8.43□□□□□ -1.06
SCN9A-204ENST00000452182 DEFB135Q30KP9 77 aa8.43□□□□□ -1.06
SCN9A-204ENST00000452182 GFI1BQ5VTD9 330 aa8.43□□□□□ -1.06
SCN9A-204ENST00000452182 ZNF705AQ6ZN79 300 aaPredicted RBP8.43□□□□□ -1.06
SCN9A-204ENST00000452182 RCHY1Q96PM5 261 aa8.43□□□□□ -1.06
SCN9A-204ENST00000452182 TREM1Q9NP99 234 aa8.43□□□□□ -1.06
SCN9A-204ENST00000452182 C7orf71A4D174 169 aa8.42□□□□□ -1.06
SCN9A-204ENST00000452182 SPRY2O43597 315 aa8.42□□□□□ -1.06
SCN9A-204ENST00000452182 KIR3DS1Q14943 382 aa8.42□□□□□ -1.06
SCN9A-204ENST00000452182 Q6AWC8 147 aa8.42□□□□□ -1.06
SCN9A-204ENST00000452182 TMEM183AQ8IXX5 376 aa8.42□□□□□ -1.06
SCN9A-204ENST00000452182 C1orf158Q8N1D5 194 aa8.42□□□□□ -1.06
SCN9A-204ENST00000452182 TMEM256Q8N2U0 113 aa8.42□□□□□ -1.06
SCN9A-204ENST00000452182 DERL1Q9BUN8 251 aa8.42□□□□□ -1.06
SCN9A-204ENST00000452182 ZNF324O75467 553 aaPredicted RBP8.41□□□□□ -1.06
SCN9A-204ENST00000452182 SRP19P09132 144 aaKnown RBP8.41□□□□□ -1.06
SCN9A-204ENST00000452182 SMUG1Q53HV7 270 aa8.41□□□□□ -1.06
SCN9A-204ENST00000452182 PRR9Q5T870 116 aa8.41□□□□□ -1.06
SCN9A-204ENST00000452182 SMIM12Q96EX1 92 aa8.41□□□□□ -1.06
SCN9A-204ENST00000452182 ASCL2Q99929 193 aa8.41□□□□□ -1.06
SCN9A-204ENST00000452182 OVOL2Q9BRP0 275 aa8.41□□□□□ -1.06
SCN9A-204ENST00000452182 MLST8Q9BVC4 326 aa8.41□□□□□ -1.06
SCN9A-204ENST00000452182 ZMAT4Q9H898 229 aa8.41□□□□□ -1.06
SCN9A-204ENST00000452182 GOLT1BQ9Y3E0 138 aa8.41□□□□□ -1.06
SCN9A-204ENST00000452182 DNAH9Q9NYC9 4486 aa8.41□□□□□ -1.06
SCN9A-204ENST00000452182 H7BYZ3 331 aa8.4□□□□□ -1.06
SCN9A-204ENST00000452182 RBMY1A1P0DJD3 496 aaKnown RBP8.4□□□□□ -1.06
SCN9A-204ENST00000452182 RBMY1CP0DJD4 496 aa8.4□□□□□ -1.06
SCN9A-204ENST00000452182 SRSF3P84103 164 aaKnown RBP8.4□□□□□ -1.06
SCN9A-204ENST00000452182 BTN1A1Q13410 526 aa8.4□□□□□ -1.06
SCN9A-204ENST00000452182 RBMY1FQ15415 496 aaKnown RBP8.4□□□□□ -1.06
SCN9A-204ENST00000452182 BAGE2Q86Y30 109 aa8.4□□□□□ -1.06
SCN9A-204ENST00000452182 NEU1Q99519 415 aa8.4□□□□□ -1.06
SCN9A-204ENST00000452182 NIPSNAP3BQ9BS92 247 aa8.4□□□□□ -1.06
SCN9A-204ENST00000452182 PARLQ9H300 379 aa8.4□□□□□ -1.06
SCN9A-204ENST00000452182 NBEAL2Q6ZNJ1 2754 aa8.4□□□□□ -1.06
SCN9A-204ENST00000452182 TRAV12-3A0A0B4J271 114 aa8.4□□□□□ -1.07
SCN9A-204ENST00000452182 SMIM9A6NGZ8 99 aa8.4□□□□□ -1.07
SCN9A-204ENST00000452182 C9JCJ5 164 aa8.4□□□□□ -1.07
SCN9A-204ENST00000452182 J3KRW8 73 aa8.4□□□□□ -1.07
SCN9A-204ENST00000452182 RNASE4P34096 147 aaKnown RBP8.4□□□□□ -1.07
SCN9A-204ENST00000452182 C8orf49Q96NF6 230 aa8.4□□□□□ -1.07
SCN9A-204ENST00000452182 COL7A1Q02388 2944 aa8.39□□□□□ -1.07
SCN9A-204ENST00000452182 TRBV20OR9-2A0A075B6H5 130 aa8.39□□□□□ -1.07
SCN9A-204ENST00000452182 TRAV21A0A0B4J279 112 aa8.39□□□□□ -1.07
SCN9A-204ENST00000452182 LINC00862A6NCI5 91 aa8.39□□□□□ -1.07
SCN9A-204ENST00000452182 C9JQL5 133 aa8.39□□□□□ -1.07
SCN9A-204ENST00000452182 GCGP01275 180 aa8.39□□□□□ -1.07
SCN9A-204ENST00000452182 PFN1P07737 140 aaKnown RBP8.39□□□□□ -1.07
SCN9A-204ENST00000452182 GNG4P50150 75 aa8.39□□□□□ -1.07
SCN9A-204ENST00000452182 CENPWQ5EE01 88 aa8.39□□□□□ -1.07
SCN9A-204ENST00000452182 UQCC3Q6UW78 93 aa8.39□□□□□ -1.07
SCN9A-204ENST00000452182 EIF4E3Q8N5X7 224 aaKnown RBP8.39□□□□□ -1.07
SCN9A-204ENST00000452182 OR11H2Q8NH07 326 aa8.39□□□□□ -1.07
SCN9A-204ENST00000452182 PYGO2Q9BRQ0 406 aa8.39□□□□□ -1.07
SCN9A-204ENST00000452182 LINC00467Q9BRT7 94 aa8.39□□□□□ -1.07
SCN9A-204ENST00000452182 TMEM208Q9BTX3 173 aa8.39□□□□□ -1.07
SCN9A-204ENST00000452182 X6R8D5 127 aa8.39□□□□□ -1.07
SCN9A-204ENST00000452182 MIFP14174 115 aa8.38□□□□□ -1.07
SCN9A-204ENST00000452182 ZNF80P51504 273 aaPredicted RBP8.38□□□□□ -1.07
SCN9A-204ENST00000452182 FAM74A3Q4VXF1 159 aa8.38□□□□□ -1.07
SCN9A-204ENST00000452182 ZC2HC1AQ96GY0 325 aa8.38□□□□□ -1.07
SCN9A-204ENST00000452182 LINC01587Q99440 93 aa8.38□□□□□ -1.07
SCN9A-204ENST00000452182 RETNQ9HD89 108 aa8.38□□□□□ -1.07
SCN9A-204ENST00000452182 HUWE1Q7Z6Z7 4374 aaKnown RBP8.37□□□□□ -1.07
SCN9A-204ENST00000452182 FABP5P3A8MUU1 101 aa8.37□□□□□ -1.07
SCN9A-204ENST00000452182 IGLV2-8P01709 118 aa8.37□□□□□ -1.07
SCN9A-204ENST00000452182 ZNF674Q2M3X9 581 aa8.37□□□□□ -1.07
SCN9A-204ENST00000452182 TDRG1Q3Y452 100 aa8.37□□□□□ -1.07
SCN9A-204ENST00000452182 LY96Q9Y6Y9 160 aa8.37□□□□□ -1.07
SCN9A-204ENST00000452182 IGHV3OR16-12A0A075B7B8 117 aa8.36□□□□□ -1.07
SCN9A-204ENST00000452182 ZNF727A8MUV8 499 aa8.36□□□□□ -1.07
SCN9A-204ENST00000452182 CRIP1P50238 77 aa8.36□□□□□ -1.07
SCN9A-204ENST00000452182 CEBPGP53567 150 aa8.36□□□□□ -1.07
SCN9A-204ENST00000452182 FAM162BQ5T6X4 162 aa8.36□□□□□ -1.07
SCN9A-204ENST00000452182 CDPF1Q6NVV7 123 aa8.36□□□□□ -1.07
SCN9A-204ENST00000452182 NHLRC2Q8NBF2 726 aa8.36□□□□□ -1.07
SCN9A-204ENST00000452182 SMIM7Q9BQ49 75 aa8.36□□□□□ -1.07
SCN9A-204ENST00000452182 IGHV1OR15-1A0A075B7D0 117 aa8.36□□□□□ -1.07
SCN9A-204ENST00000452182 RRN3P1Q2M238 152 aa8.36□□□□□ -1.07
SCN9A-204ENST00000452182 ANXA2RQ3ZCQ2 193 aa8.36□□□□□ -1.07
SCN9A-204ENST00000452182 Q6ZQT7 251 aa8.36□□□□□ -1.07
SCN9A-204ENST00000452182 COMMD7Q86VX2 200 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms