RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 GATD1Q8NB37 220 aa10.57□□□□□ -0.72
SYNGAP1-204ENST00000449372 SPANXA1Q9NS26 97 aa10.57□□□□□ -0.72
SYNGAP1-204ENST00000449372 CSDC2Q9Y534 153 aaKnown RBP10.57□□□□□ -0.72
SYNGAP1-204ENST00000449372 H3BTX0 84 aa10.57□□□□□ -0.72
SYNGAP1-204ENST00000449372 TGFAP01135 160 aa10.57□□□□□ -0.72
SYNGAP1-204ENST00000449372 HCP5Q6MZN7 132 aa10.57□□□□□ -0.72
SYNGAP1-204ENST00000449372 ZFP2Q6ZN57 461 aa10.57□□□□□ -0.72
SYNGAP1-204ENST00000449372 TNCP24821 2201 aa10.57□□□□□ -0.72
SYNGAP1-204ENST00000449372 H3BVH4 76 aa10.56□□□□□ -0.72
SYNGAP1-204ENST00000449372 BSPH1Q075Z2 132 aa10.56□□□□□ -0.72
SYNGAP1-204ENST00000449372 RPEQ96AT9 228 aa10.56□□□□□ -0.72
SYNGAP1-204ENST00000449372 TMEM160Q9NX00 188 aa10.56□□□□□ -0.72
SYNGAP1-204ENST00000449372 A0A1W2PPI3 338 aa10.56□□□□□ -0.72
SYNGAP1-204ENST00000449372 DPM2O94777 84 aa10.56□□□□□ -0.72
SYNGAP1-204ENST00000449372 CITED2Q99967 270 aaPredicted RBP10.56□□□□□ -0.72
SYNGAP1-204ENST00000449372 A8MWV9 139 aa10.55□□□□□ -0.72
SYNGAP1-204ENST00000449372 TMEM200BQ69YZ2 307 aa10.55□□□□□ -0.72
SYNGAP1-204ENST00000449372 PPP1R27Q86WC6 154 aa10.55□□□□□ -0.72
SYNGAP1-204ENST00000449372 ACACAQ13085 2346 aa10.55□□□□□ -0.72
SYNGAP1-204ENST00000449372 GP9P14770 177 aa10.55□□□□□ -0.72
SYNGAP1-204ENST00000449372 CCL8P80075 99 aa10.55□□□□□ -0.72
SYNGAP1-204ENST00000449372 FOXC2Q99958 501 aa10.55□□□□□ -0.72
SYNGAP1-204ENST00000449372 PLCE1Q9P212 2302 aa10.55□□□□□ -0.72
SYNGAP1-204ENST00000449372 HLA-DRB4P13762 266 aa10.55□□□□□ -0.72
SYNGAP1-204ENST00000449372 PDE6HQ13956 83 aa10.55□□□□□ -0.72
SYNGAP1-204ENST00000449372 SLC25A39Q9BZJ4 359 aaPredicted RBP10.55□□□□□ -0.72
SYNGAP1-204ENST00000449372 U3KQK5 164 aa10.55□□□□□ -0.72
SYNGAP1-204ENST00000449372 HLA-DRB4X5D2U9 266 aa10.55□□□□□ -0.72
SYNGAP1-204ENST00000449372 TRBV7-3A0A075B6L6 115 aa10.54□□□□□ -0.72
SYNGAP1-204ENST00000449372 IGKV1D-37A0A075B6S9 117 aa10.54□□□□□ -0.72
SYNGAP1-204ENST00000449372 CRLF1O75462 422 aa10.54□□□□□ -0.72
SYNGAP1-204ENST00000449372 TWIST1Q15672 202 aa10.54□□□□□ -0.72
SYNGAP1-204ENST00000449372 FAM104BQ5XKR9 115 aa10.54□□□□□ -0.72
SYNGAP1-204ENST00000449372 Q71RC1 249 aaPredicted RBP10.54□□□□□ -0.72
SYNGAP1-204ENST00000449372 LINC01549A6NIU2 74 aa10.54□□□□□ -0.72
SYNGAP1-204ENST00000449372 CCL3L1P16619 93 aa10.54□□□□□ -0.72
SYNGAP1-204ENST00000449372 ZNF493Q6ZR52 646 aa10.54□□□□□ -0.72
SYNGAP1-204ENST00000449372 VKORC1Q9BQB6 163 aa10.54□□□□□ -0.72
SYNGAP1-204ENST00000449372 TRAV40A0A0B4J280 105 aa10.54□□□□□ -0.72
SYNGAP1-204ENST00000449372 FSTL3O95633 263 aa10.54□□□□□ -0.72
SYNGAP1-204ENST00000449372 IGHV3-48P01763 117 aa10.54□□□□□ -0.72
SYNGAP1-204ENST00000449372 CKS2P33552 79 aa10.54□□□□□ -0.72
SYNGAP1-204ENST00000449372 PTPRQQ9UMZ3 2332 aa10.54□□□□□ -0.72
SYNGAP1-204ENST00000449372 TMEM213A2RRL7 107 aa10.53□□□□□ -0.72
SYNGAP1-204ENST00000449372 SMKR1H3BMG3 65 aa10.53□□□□□ -0.72
SYNGAP1-204ENST00000449372 C10orf55Q5SWW7 151 aa10.53□□□□□ -0.72
SYNGAP1-204ENST00000449372 ANKRD29Q8N6D5 301 aa10.53□□□□□ -0.72
SYNGAP1-204ENST00000449372 CCL17Q92583 94 aa10.53□□□□□ -0.72
SYNGAP1-204ENST00000449372 TRAV8-2A0A0B4J237 113 aa10.53□□□□□ -0.72
SYNGAP1-204ENST00000449372 NPYP01303 97 aa10.53□□□□□ -0.72
SYNGAP1-204ENST00000449372 LEPP41159 167 aa10.53□□□□□ -0.72
SYNGAP1-204ENST00000449372 MRPL51Q4U2R6 128 aaKnown RBP10.53□□□□□ -0.72
SYNGAP1-204ENST00000449372 TMEM178BH3BS89 294 aa10.52□□□□□ -0.72
SYNGAP1-204ENST00000449372 NCBP2LA6PVI3 153 aaKnown RBP10.52□□□□□ -0.73
SYNGAP1-204ENST00000449372 C3orf56Q8N813 242 aa10.52□□□□□ -0.73
SYNGAP1-204ENST00000449372 SHANK2-AS3Q9BTD1 123 aa10.52□□□□□ -0.73
SYNGAP1-204ENST00000449372 KAAG1Q9UBP8 84 aa10.52□□□□□ -0.73
SYNGAP1-204ENST00000449372 MYMXA0A1B0GTQ4 84 aa10.52□□□□□ -0.73
SYNGAP1-204ENST00000449372 RPL7P18124 248 aaKnown RBP10.52□□□□□ -0.73
SYNGAP1-204ENST00000449372 ASIPP42127 132 aa10.52□□□□□ -0.73
SYNGAP1-204ENST00000449372 SIGLEC9Q9Y336 463 aa10.52□□□□□ -0.73
SYNGAP1-204ENST00000449372 NRGNQ92686 78 aa10.52□□□□□ -0.73
SYNGAP1-204ENST00000449372 TMEM126AQ9H061 195 aa10.52□□□□□ -0.73
SYNGAP1-204ENST00000449372 DCHS2Q6V1P9 2916 aa10.51□□□□□ -0.73
SYNGAP1-204ENST00000449372 MFAP4P55083 255 aa10.51□□□□□ -0.73
SYNGAP1-204ENST00000449372 TMEM155Q4W5P6 130 aa10.51□□□□□ -0.73
SYNGAP1-204ENST00000449372 LYRM7Q5U5X0 104 aa10.51□□□□□ -0.73
SYNGAP1-204ENST00000449372 SMIM9A6NGZ8 99 aa10.51□□□□□ -0.73
SYNGAP1-204ENST00000449372 IGLV2-23P01705 113 aa10.51□□□□□ -0.73
SYNGAP1-204ENST00000449372 IGHV1-8P0DP01 117 aa10.51□□□□□ -0.73
SYNGAP1-204ENST00000449372 FBXL19-AS1Q494R0 122 aa10.51□□□□□ -0.73
SYNGAP1-204ENST00000449372 ASCL2Q99929 193 aa10.51□□□□□ -0.73
SYNGAP1-204ENST00000449372 RAXQ9Y2V3 346 aa10.51□□□□□ -0.73
SYNGAP1-204ENST00000449372 TRBV19A0A075B6N1 114 aa10.51□□□□□ -0.73
SYNGAP1-204ENST00000449372 E7EQL1 145 aa10.5□□□□□ -0.73
SYNGAP1-204ENST00000449372 ATP5LO75964 103 aa10.5□□□□□ -0.73
SYNGAP1-204ENST00000449372 Q6Q795 121 aa10.5□□□□□ -0.73
SYNGAP1-204ENST00000449372 LYZL1Q6UWQ5 148 aa10.5□□□□□ -0.73
SYNGAP1-204ENST00000449372 Q6ZQT7 251 aa10.5□□□□□ -0.73
SYNGAP1-204ENST00000449372 MRPL35Q9NZE8 188 aaKnown RBP10.5□□□□□ -0.73
SYNGAP1-204ENST00000449372 ZNF785A8K8V0 405 aa10.5□□□□□ -0.73
SYNGAP1-204ENST00000449372 SPTBN2O15020 2390 aa10.49□□□□□ -0.73
SYNGAP1-204ENST00000449372 TCL1BO95988 128 aa10.49□□□□□ -0.73
SYNGAP1-204ENST00000449372 SCGB1C2P0DMR2 95 aa10.49□□□□□ -0.73
SYNGAP1-204ENST00000449372 PTPRZ1P23471 2315 aaPredicted RBP10.49□□□□□ -0.73
SYNGAP1-204ENST00000449372 UCNP55089 124 aa10.49□□□□□ -0.73
SYNGAP1-204ENST00000449372 NXT2Q9NPJ8 142 aaKnown RBP10.49□□□□□ -0.73
SYNGAP1-204ENST00000449372 IGLV2-11P01706 119 aa10.49□□□□□ -0.73
SYNGAP1-204ENST00000449372 UBE2D3P61077 147 aa10.49□□□□□ -0.73
SYNGAP1-204ENST00000449372 UBE2D2P62837 147 aa10.49□□□□□ -0.73
SYNGAP1-204ENST00000449372 RASL10AQ92737 203 aa10.49□□□□□ -0.73
SYNGAP1-204ENST00000449372 RNF125Q96EQ8 232 aa10.49□□□□□ -0.73
SYNGAP1-204ENST00000449372 TLN1Q9Y490 2541 aaKnown RBP10.49□□□□□ -0.73
SYNGAP1-204ENST00000449372 OR10J6PQ8NGY7 276 aa10.49□□□□□ -0.73
SYNGAP1-204ENST00000449372 RNASE6Q93091 150 aaKnown RBP10.49□□□□□ -0.73
SYNGAP1-204ENST00000449372 SBSPONQ8IVN8 264 aa10.48□□□□□ -0.73
SYNGAP1-204ENST00000449372 H3BRN7 92 aa10.48□□□□□ -0.73
SYNGAP1-204ENST00000449372 PIMREGQ9BSJ6 248 aa10.48□□□□□ -0.73
SYNGAP1-204ENST00000449372 NDUFA3O95167 84 aa10.47□□□□□ -0.73
SYNGAP1-204ENST00000449372 LOXP28300 417 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms