RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 BAGE3Q86Y29 109 aa13.37□□□□□ -0.27
LMNA-208ENST00000448611 TMEM18Q96B42 140 aa13.37□□□□□ -0.27
LMNA-208ENST00000448611 LENEPQ9Y5L5 61 aa13.37□□□□□ -0.27
LMNA-208ENST00000448611 MAST4O15021 2626 aa13.36□□□□□ -0.27
LMNA-208ENST00000448611 RIGQ13278 110 aa13.36□□□□□ -0.27
LMNA-208ENST00000448611 KLF5Q13887 457 aaPredicted RBP13.36□□□□□ -0.27
LMNA-208ENST00000448611 LINC01559Q495D7 138 aa13.36□□□□□ -0.27
LMNA-208ENST00000448611 PRR31Q5SQ13 230 aa13.36□□□□□ -0.27
LMNA-208ENST00000448611 LYZL1Q6UWQ5 148 aa13.36□□□□□ -0.27
LMNA-208ENST00000448611 GATD1Q8NB37 220 aa13.36□□□□□ -0.27
LMNA-208ENST00000448611 LINC00477Q96M19 166 aa13.36□□□□□ -0.27
LMNA-208ENST00000448611 DEFB1P60022 68 aa13.35□□□□□ -0.27
LMNA-208ENST00000448611 SAMD13Q5VXD3 122 aa13.35□□□□□ -0.27
LMNA-208ENST00000448611 OR10J6PQ8NGY7 276 aa13.35□□□□□ -0.27
LMNA-208ENST00000448611 ALKBH7Q9BT30 221 aaPredicted RBP13.35□□□□□ -0.27
LMNA-208ENST00000448611 TPPP3Q9BW30 176 aa13.35□□□□□ -0.27
LMNA-208ENST00000448611 TMEM160Q9NX00 188 aa13.35□□□□□ -0.27
LMNA-208ENST00000448611 A0A1B0GW15 77 aa13.35□□□□□ -0.27
LMNA-208ENST00000448611 ORM1P02763 201 aa13.35□□□□□ -0.27
LMNA-208ENST00000448611 IGLC6P0CF74 106 aa13.35□□□□□ -0.27
LMNA-208ENST00000448611 HIST1H1AQ02539 215 aaPredicted RBP13.35□□□□□ -0.27
LMNA-208ENST00000448611 DEFB136Q30KP8 78 aa13.35□□□□□ -0.27
LMNA-208ENST00000448611 C4orf3Q8WVX3 66 aa13.35□□□□□ -0.27
LMNA-208ENST00000448611 ANK3Q12955 4377 aaKnown RBP13.34□□□□□ -0.27
LMNA-208ENST00000448611 F8P00451 2351 aa13.34□□□□□ -0.27
LMNA-208ENST00000448611 C2orf70A6NJV1 201 aa13.34□□□□□ -0.27
LMNA-208ENST00000448611 CTRLP40313 264 aa13.34□□□□□ -0.27
LMNA-208ENST00000448611 OR8A1Q8NGG7 326 aa13.34□□□□□ -0.27
LMNA-208ENST00000448611 C18orf32Q8TCD1 76 aa13.34□□□□□ -0.27
LMNA-208ENST00000448611 RCHY1Q96PM5 261 aa13.34□□□□□ -0.27
LMNA-208ENST00000448611 MS4A6AQ9H2W1 248 aa13.34□□□□□ -0.27
LMNA-208ENST00000448611 BORCS7Q96B45 105 aa13.33□□□□□ -0.28
LMNA-208ENST00000448611 FAM19A4Q96LR4 140 aa13.33□□□□□ -0.28
LMNA-208ENST00000448611 NIT2Q9NQR4 276 aa13.33□□□□□ -0.28
LMNA-208ENST00000448611 C11orf21Q9P2W6 132 aa13.33□□□□□ -0.28
LMNA-208ENST00000448611 IGKV3D-20A0A0C4DH25 116 aa13.33□□□□□ -0.28
LMNA-208ENST00000448611 F6UB75 175 aa13.33□□□□□ -0.28
LMNA-208ENST00000448611 RNASE1P07998 156 aaKnown RBP13.33□□□□□ -0.28
LMNA-208ENST00000448611 ID1P41134 155 aa13.33□□□□□ -0.28
LMNA-208ENST00000448611 SLURP1P55000 103 aa13.33□□□□□ -0.28
LMNA-208ENST00000448611 SCGB2A2Q13296 93 aa13.33□□□□□ -0.28
LMNA-208ENST00000448611 PRR9Q5T870 116 aa13.33□□□□□ -0.28
LMNA-208ENST00000448611 FER1L6-AS1Q8NA97 138 aa13.33□□□□□ -0.28
LMNA-208ENST00000448611 HIVEP2P31629 2446 aa13.32□□□□□ -0.28
LMNA-208ENST00000448611 LOC102724200A0A096LPH7 203 aaPredicted RBP13.32□□□□□ -0.28
LMNA-208ENST00000448611 LINC01619G3V211 115 aa13.32□□□□□ -0.28
LMNA-208ENST00000448611 ZFAND2AQ8N6M9 145 aa13.32□□□□□ -0.28
LMNA-208ENST00000448611 IQCJQ1A5X6 159 aa13.31□□□□□ -0.28
LMNA-208ENST00000448611 ADAMTSL5Q6ZMM2 481 aa13.31□□□□□ -0.28
LMNA-208ENST00000448611 ZNF493Q6ZR52 646 aa13.31□□□□□ -0.28
LMNA-208ENST00000448611 WFDC3Q8IUB2 231 aa13.31□□□□□ -0.28
LMNA-208ENST00000448611 OR11H1Q8NG94 326 aa13.31□□□□□ -0.28
LMNA-208ENST00000448611 PAFAH1B2P68402 229 aa13.31□□□□□ -0.28
LMNA-208ENST00000448611 KHDC1LQ5JSQ8 128 aa13.31□□□□□ -0.28
LMNA-208ENST00000448611 Q6ZQT7 251 aa13.31□□□□□ -0.28
LMNA-208ENST00000448611 OR1N2Q8NGR9 330 aa13.31□□□□□ -0.28
LMNA-208ENST00000448611 TRBV7-9A0A0J9YWB2 115 aa13.3□□□□□ -0.28
LMNA-208ENST00000448611 INAFM1C9JVW0 142 aa13.3□□□□□ -0.28
LMNA-208ENST00000448611 K7EQG2 157 aa13.3□□□□□ -0.28
LMNA-208ENST00000448611 JOSD1Q15040 202 aaPredicted RBP13.3□□□□□ -0.28
LMNA-208ENST00000448611 CDPF1Q6NVV7 123 aa13.3□□□□□ -0.28
LMNA-208ENST00000448611 KLHL30-AS1Q8NEE0 82 aa13.3□□□□□ -0.28
LMNA-208ENST00000448611 KCNS1Q96KK3 526 aa13.3□□□□□ -0.28
LMNA-208ENST00000448611 CNFNQ9BYD5 112 aa13.3□□□□□ -0.28
LMNA-208ENST00000448611 WFDC12Q8WWY7 111 aa13.29□□□□□ -0.28
LMNA-208ENST00000448611 DUX3Q96PT4 197 aa13.29□□□□□ -0.28
LMNA-208ENST00000448611 MUC21A0A0G2JKD1 596 aa13.29□□□□□ -0.28
LMNA-208ENST00000448611 MUC21A0A140T8X8 626 aa13.29□□□□□ -0.28
LMNA-208ENST00000448611 TFPI2P48307 235 aa13.29□□□□□ -0.28
LMNA-208ENST00000448611 MUC21Q5SSG8 566 aa13.29□□□□□ -0.28
LMNA-208ENST00000448611 DNLZQ5SXM8 178 aa13.29□□□□□ -0.28
LMNA-208ENST00000448611 HIST2H2BDQ6DRA6 164 aa13.29□□□□□ -0.28
LMNA-208ENST00000448611 APRG1Q8IVJ8 170 aa13.29□□□□□ -0.28
LMNA-208ENST00000448611 DPF1Q92782 380 aa13.29□□□□□ -0.28
LMNA-208ENST00000448611 C16orf95Q9H693 158 aa13.29□□□□□ -0.28
LMNA-208ENST00000448611 M0QZ24 198 aa13.28□□□□□ -0.28
LMNA-208ENST00000448611 HILS1P60008 231 aa13.28□□□□□ -0.28
LMNA-208ENST00000448611 PCP4L1A6NKN8 68 aa13.27□□□□□ -0.28
LMNA-208ENST00000448611 GPX1P07203 203 aa13.27□□□□□ -0.28
LMNA-208ENST00000448611 ZNF688P0C7X2 276 aa13.27□□□□□ -0.28
LMNA-208ENST00000448611 ZNF418Q8TF45 676 aaPredicted RBP13.27□□□□□ -0.28
LMNA-208ENST00000448611 SSTP61278 116 aa13.27□□□□□ -0.29
LMNA-208ENST00000448611 OR9G4Q8NGQ1 327 aa13.27□□□□□ -0.29
LMNA-208ENST00000448611 LINC01006Q8NI28 216 aa13.27□□□□□ -0.29
LMNA-208ENST00000448611 SAMD10Q9BYL1 202 aa13.27□□□□□ -0.29
LMNA-208ENST00000448611 CUBNO60494 3623 aa13.26□□□□□ -0.29
LMNA-208ENST00000448611 J3KRW8 73 aa13.26□□□□□ -0.29
LMNA-208ENST00000448611 NTF3P20783 257 aa13.26□□□□□ -0.29
LMNA-208ENST00000448611 SNRPD3P62318 126 aaKnown RBP13.26□□□□□ -0.29
LMNA-208ENST00000448611 PSMG4Q5JS54 123 aa13.26□□□□□ -0.29
LMNA-208ENST00000448611 DLX4Q92988 240 aaPredicted RBP13.26□□□□□ -0.29
LMNA-208ENST00000448611 PEMTQ9UBM1 199 aa13.26□□□□□ -0.29
LMNA-208ENST00000448611 TRAV21A0A0B4J279 112 aa13.25□□□□□ -0.29
LMNA-208ENST00000448611 ZNF324O75467 553 aaPredicted RBP13.25□□□□□ -0.29
LMNA-208ENST00000448611 TWIST1Q15672 202 aa13.25□□□□□ -0.29
LMNA-208ENST00000448611 Q6ZWC4 215 aa13.25□□□□□ -0.29
LMNA-208ENST00000448611 MTORP42345 2549 aa13.25□□□□□ -0.29
LMNA-208ENST00000448611 CD28P10747 220 aa13.25□□□□□ -0.29
LMNA-208ENST00000448611 FAM104BQ5XKR9 115 aa13.25□□□□□ -0.29
LMNA-208ENST00000448611 URB1-AS1Q96HZ7 61 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms