RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 LAIR2Q6ISS4 152 aa7.24□□□□□ -1.25
NIPBL-202ENST00000448238 SLC25A45Q8N413 288 aa7.24□□□□□ -1.25
NIPBL-202ENST00000448238 TM2D2Q9BX73 214 aa7.24□□□□□ -1.25
NIPBL-202ENST00000448238 DLEC1Q9Y238 1755 aa7.24□□□□□ -1.25
NIPBL-202ENST00000448238 GATA3P23771 443 aa7.24□□□□□ -1.25
NIPBL-202ENST00000448238 AMTNQ6UX39 209 aa7.24□□□□□ -1.25
NIPBL-202ENST00000448238 MRPS18CQ9Y3D5 142 aaKnown RBP7.24□□□□□ -1.25
NIPBL-202ENST00000448238 FOXS1O43638 330 aa7.24□□□□□ -1.25
NIPBL-202ENST00000448238 CISD3P0C7P0 127 aa7.24□□□□□ -1.25
NIPBL-202ENST00000448238 TMEM61Q8N0U2 210 aa7.24□□□□□ -1.25
NIPBL-202ENST00000448238 CENPVL3A0A0U1RRI6 287 aa7.23□□□□□ -1.25
NIPBL-202ENST00000448238 PRSS57Q6UWY2 283 aa7.23□□□□□ -1.25
NIPBL-202ENST00000448238 DKK1O94907 266 aa7.23□□□□□ -1.25
NIPBL-202ENST00000448238 XCL1P47992 114 aa7.23□□□□□ -1.25
NIPBL-202ENST00000448238 SRSF3P84103 164 aaKnown RBP7.23□□□□□ -1.25
NIPBL-202ENST00000448238 PMAIP1Q13794 54 aa7.23□□□□□ -1.25
NIPBL-202ENST00000448238 C8orf86Q6ZUL3 223 aa7.23□□□□□ -1.25
NIPBL-202ENST00000448238 SERP2Q8N6R1 65 aa7.23□□□□□ -1.25
NIPBL-202ENST00000448238 BRCA1P38398 1863 aaKnown RBP7.23□□□□□ -1.25
NIPBL-202ENST00000448238 VMO1Q7Z5L0 202 aa7.23□□□□□ -1.25
NIPBL-202ENST00000448238 GAFA1Q96PS6 74 aa7.23□□□□□ -1.25
NIPBL-202ENST00000448238 TRAV4A0A0B4J268 109 aa7.23□□□□□ -1.25
NIPBL-202ENST00000448238 CELA2BP08218 269 aaPredicted RBP7.23□□□□□ -1.25
NIPBL-202ENST00000448238 RPP25LQ8N5L8 163 aaKnown RBP7.23□□□□□ -1.25
NIPBL-202ENST00000448238 SRXN1Q9BYN0 137 aa7.23□□□□□ -1.25
NIPBL-202ENST00000448238 IGHV4OR15-8A0A075B7B6 117 aa7.23□□□□□ -1.25
NIPBL-202ENST00000448238 A0A087WW49 117 aa7.23□□□□□ -1.25
NIPBL-202ENST00000448238 IGLC7A0M8Q6 106 aa7.23□□□□□ -1.25
NIPBL-202ENST00000448238 HIST2H2BCQ6DN03 193 aa7.23□□□□□ -1.25
NIPBL-202ENST00000448238 SCN7AQ01118 1682 aa7.23□□□□□ -1.25
NIPBL-202ENST00000448238 SP5Q6BEB4 398 aaPredicted RBP7.23□□□□□ -1.25
NIPBL-202ENST00000448238 TMEM92Q6UXU6 159 aa7.23□□□□□ -1.25
NIPBL-202ENST00000448238 CAMK2N2Q96S95 79 aa7.23□□□□□ -1.25
NIPBL-202ENST00000448238 B9D2Q9BPU9 175 aa7.23□□□□□ -1.25
NIPBL-202ENST00000448238 K7ERJ3 54 aa7.23□□□□□ -1.25
NIPBL-202ENST00000448238 KLK9Q9UKQ9 250 aa7.23□□□□□ -1.25
NIPBL-202ENST00000448238 SBF2Q86WG5 1849 aa7.23□□□□□ -1.25
NIPBL-202ENST00000448238 XIRP1Q702N8 1843 aaKnown RBP7.22□□□□□ -1.25
NIPBL-202ENST00000448238 NDPQ00604 133 aa7.22□□□□□ -1.25
NIPBL-202ENST00000448238 DKK2Q9UBU2 259 aa7.22□□□□□ -1.25
NIPBL-202ENST00000448238 IGHV2-70DA0A0C4DH43 119 aa7.22□□□□□ -1.25
NIPBL-202ENST00000448238 SPAARA0A1B0GVQ0 90 aa7.22□□□□□ -1.25
NIPBL-202ENST00000448238 DEFB104AQ8WTQ1 72 aa7.22□□□□□ -1.25
NIPBL-202ENST00000448238 COX7A2LO14548 114 aa7.22□□□□□ -1.25
NIPBL-202ENST00000448238 LINC01590Q5TEZ4 76 aa7.22□□□□□ -1.25
NIPBL-202ENST00000448238 DIRC1Q969H9 104 aa7.22□□□□□ -1.25
NIPBL-202ENST00000448238 LINC01619G3V211 115 aa7.22□□□□□ -1.25
NIPBL-202ENST00000448238 TMEM178BH3BS89 294 aa7.22□□□□□ -1.25
NIPBL-202ENST00000448238 CCL25O15444 150 aa7.22□□□□□ -1.25
NIPBL-202ENST00000448238 DEFB131AP59861 70 aa7.22□□□□□ -1.25
NIPBL-202ENST00000448238 MRPL51Q4U2R6 128 aaKnown RBP7.22□□□□□ -1.25
NIPBL-202ENST00000448238 RNF152Q8N8N0 203 aa7.22□□□□□ -1.25
NIPBL-202ENST00000448238 IGF2BP2-AS1Q96M15 143 aa7.22□□□□□ -1.25
NIPBL-202ENST00000448238 ZNF134P52741 427 aa7.22□□□□□ -1.25
NIPBL-202ENST00000448238 TMEM14EPQ6UXP3 125 aa7.22□□□□□ -1.25
NIPBL-202ENST00000448238 C1QL2Q7Z5L3 287 aa7.22□□□□□ -1.25
NIPBL-202ENST00000448238 IGHV1-69DA0A0B4J2H0 117 aa7.21□□□□□ -1.25
NIPBL-202ENST00000448238 DAZ2Q13117 558 aaKnown RBP7.21□□□□□ -1.25
NIPBL-202ENST00000448238 DAZ4Q86SG3 579 aaKnown RBP7.21□□□□□ -1.25
NIPBL-202ENST00000448238 SHISA4Q96DD7 197 aa7.21□□□□□ -1.25
NIPBL-202ENST00000448238 DAZ3Q9NR90 486 aaKnown RBP7.21□□□□□ -1.25
NIPBL-202ENST00000448238 NOTCH4Q99466 2003 aa7.21□□□□□ -1.25
NIPBL-202ENST00000448238 Q8N9L7 120 aa7.21□□□□□ -1.25
NIPBL-202ENST00000448238 SBF1O95248 1867 aa7.21□□□□□ -1.25
NIPBL-202ENST00000448238 TRAV26-1A0A087WT03 109 aa7.21□□□□□ -1.25
NIPBL-202ENST00000448238 IGLL1P15814 213 aa7.21□□□□□ -1.25
NIPBL-202ENST00000448238 HIST2H2BDQ6DRA6 164 aa7.21□□□□□ -1.25
NIPBL-202ENST00000448238 RNF185Q96GF1 192 aa7.21□□□□□ -1.25
NIPBL-202ENST00000448238 SHANK2-AS3Q9BTD1 123 aa7.21□□□□□ -1.25
NIPBL-202ENST00000448238 IGHV1-3A0A0C4DH29 117 aa7.21□□□□□ -1.26
NIPBL-202ENST00000448238 IGHV2-70P01814 119 aa7.21□□□□□ -1.26
NIPBL-202ENST00000448238 NDUFV3P56181 108 aaKnown RBP7.21□□□□□ -1.26
NIPBL-202ENST00000448238 STRCQ7RTU9 1775 aa7.21□□□□□ -1.26
NIPBL-202ENST00000448238 IGHV4-4A0A075B6R2 117 aa7.21□□□□□ -1.26
NIPBL-202ENST00000448238 LGALS9O00182 355 aa7.21□□□□□ -1.26
NIPBL-202ENST00000448238 SLX1AQ9BQ83 275 aa7.21□□□□□ -1.26
NIPBL-202ENST00000448238 WBP1Q96G27 269 aa7.2□□□□□ -1.26
NIPBL-202ENST00000448238 XCL2Q9UBD3 114 aa7.2□□□□□ -1.26
NIPBL-202ENST00000448238 DENND4CQ5VZ89 1909 aa7.2□□□□□ -1.26
NIPBL-202ENST00000448238 HIVEP2P31629 2446 aa7.2□□□□□ -1.26
NIPBL-202ENST00000448238 TRAV23DV6A0A075B6W5 121 aa7.2□□□□□ -1.26
NIPBL-202ENST00000448238 GZMMP51124 257 aa7.2□□□□□ -1.26
NIPBL-202ENST00000448238 PAX9P55771 341 aa7.2□□□□□ -1.26
NIPBL-202ENST00000448238 SPINK13Q1W4C9 94 aa7.2□□□□□ -1.26
NIPBL-202ENST00000448238 CD24P25063 80 aa7.2□□□□□ -1.26
NIPBL-202ENST00000448238 CCL18P55774 89 aa7.2□□□□□ -1.26
NIPBL-202ENST00000448238 LCTP09848 1927 aa7.2□□□□□ -1.26
NIPBL-202ENST00000448238 IGKV1OR2-108A0A075B7D4 117 aa7.2□□□□□ -1.26
NIPBL-202ENST00000448238 ZNF362Q5T0B9 420 aaPredicted RBP7.2□□□□□ -1.26
NIPBL-202ENST00000448238 FN1P02751 2386 aaKnown RBP7.2□□□□□ -1.26
NIPBL-202ENST00000448238 PLXNA2O75051 1894 aa7.2□□□□□ -1.26
NIPBL-202ENST00000448238 FOXI1Q12951 378 aa7.2□□□□□ -1.26
NIPBL-202ENST00000448238 MST1LQ2TV78 715 aa7.2□□□□□ -1.26
NIPBL-202ENST00000448238 IGHV1-8P0DP01 117 aa7.2□□□□□ -1.26
NIPBL-202ENST00000448238 MRPL53Q96EL3 112 aaKnown RBP7.19□□□□□ -1.26
NIPBL-202ENST00000448238 PLXNB3Q9ULL4 1909 aa7.19□□□□□ -1.26
NIPBL-202ENST00000448238 IGHV3-16A0A0C4DH30 117 aa7.19□□□□□ -1.26
NIPBL-202ENST00000448238 H3BUX3 64 aa7.19□□□□□ -1.26
NIPBL-202ENST00000448238 FAM231DQ6ZW35 169 aa7.19□□□□□ -1.26
NIPBL-202ENST00000448238 C20orf197Q8N268 126 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms