RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 CRXO43186 299 aaPredicted RBP9.26□□□□□ -0.93
MSH6-204ENST00000445503 ATP5LO75964 103 aa9.26□□□□□ -0.93
MSH6-204ENST00000445503 CTSGP08311 255 aa9.26□□□□□ -0.93
MSH6-204ENST00000445503 MTURNQ8N3F0 131 aa9.26□□□□□ -0.93
MSH6-204ENST00000445503 DMXL2Q8TDJ6 3036 aa9.26□□□□□ -0.93
MSH6-204ENST00000445503 RBX1P62877 108 aa9.26□□□□□ -0.93
MSH6-204ENST00000445503 OR1N2Q8NGR9 330 aa9.26□□□□□ -0.93
MSH6-204ENST00000445503 FAM208BQ5VWN6 2430 aa9.26□□□□□ -0.93
MSH6-204ENST00000445503 C9orf118A6NHY6 69 aa9.26□□□□□ -0.93
MSH6-204ENST00000445503 EFNA4P52798 201 aa9.26□□□□□ -0.93
MSH6-204ENST00000445503 DTX2Q86UW9 622 aa9.26□□□□□ -0.93
MSH6-204ENST00000445503 LOC107984156A0A0G2JMH3 177 aa9.25□□□□□ -0.93
MSH6-204ENST00000445503 WI2-2373I1.2A0A1W2PRP0 233 aa9.25□□□□□ -0.93
MSH6-204ENST00000445503 OR11H12B2RN74 326 aa9.25□□□□□ -0.93
MSH6-204ENST00000445503 CDKN1BP46527 198 aa9.25□□□□□ -0.93
MSH6-204ENST00000445503 ARL17AQ8IVW1 177 aa9.25□□□□□ -0.93
MSH6-204ENST00000445503 OR11H1Q8NG94 326 aa9.25□□□□□ -0.93
MSH6-204ENST00000445503 OR11H2Q8NH07 326 aa9.25□□□□□ -0.93
MSH6-204ENST00000445503 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.25□□□□□ -0.93
MSH6-204ENST00000445503 RNASE4P34096 147 aaKnown RBP9.25□□□□□ -0.93
MSH6-204ENST00000445503 RAB9AP51151 201 aa9.25□□□□□ -0.93
MSH6-204ENST00000445503 CFHR4Q92496 578 aa9.25□□□□□ -0.93
MSH6-204ENST00000445503 CHAC1Q9BUX1 264 aa9.25□□□□□ -0.93
MSH6-204ENST00000445503 RAXQ9Y2V3 346 aa9.25□□□□□ -0.93
MSH6-204ENST00000445503 CHD8Q9HCK8 2581 aa9.25□□□□□ -0.93
MSH6-204ENST00000445503 ACACBO00763 2458 aa9.25□□□□□ -0.93
MSH6-204ENST00000445503 TMEM238C9JI98 176 aa9.25□□□□□ -0.93
MSH6-204ENST00000445503 SAA4P35542 130 aa9.25□□□□□ -0.93
MSH6-204ENST00000445503 TTC9CQ8N5M4 171 aa9.25□□□□□ -0.93
MSH6-204ENST00000445503 H3BRM9 83 aa9.24□□□□□ -0.93
MSH6-204ENST00000445503 M0R1W7 72 aa9.24□□□□□ -0.93
MSH6-204ENST00000445503 BRD3OSQ6XYD6 125 aa9.24□□□□□ -0.93
MSH6-204ENST00000445503 SLC50A1Q9BRV3 221 aa9.24□□□□□ -0.93
MSH6-204ENST00000445503 SPTBN4Q9H254 2564 aa9.24□□□□□ -0.93
MSH6-204ENST00000445503 TNFRSF13BO14836 293 aaPredicted RBP9.24□□□□□ -0.93
MSH6-204ENST00000445503 GAS8-AS1O95177 125 aa9.24□□□□□ -0.93
MSH6-204ENST00000445503 FAM74A4Q5TZK3 123 aa9.24□□□□□ -0.93
MSH6-204ENST00000445503 AGPAT4-IT1Q9H0P7 198 aa9.24□□□□□ -0.93
MSH6-204ENST00000445503 MRPL35Q9NZE8 188 aaKnown RBP9.24□□□□□ -0.93
MSH6-204ENST00000445503 FOXE3Q13461 319 aa9.24□□□□□ -0.93
MSH6-204ENST00000445503 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.24□□□□□ -0.93
MSH6-204ENST00000445503 C14orf178Q8N769 122 aaPredicted RBP9.24□□□□□ -0.93
MSH6-204ENST00000445503 LAGE3Q14657 143 aa9.23□□□□□ -0.93
MSH6-204ENST00000445503 IGHV7-81A0A0B4J1V7 117 aa9.23□□□□□ -0.93
MSH6-204ENST00000445503 EMP1P54849 157 aa9.23□□□□□ -0.93
MSH6-204ENST00000445503 SCGB1C2P0DMR2 95 aa9.23□□□□□ -0.93
MSH6-204ENST00000445503 DEFB1P60022 68 aa9.23□□□□□ -0.93
MSH6-204ENST00000445503 SRSF1Q07955 248 aaKnown RBP eCLIP9.23□□□□□ -0.936e-6■■■■□ 21.2
MSH6-204ENST00000445503 OR11H6Q8NGC7 330 aa9.23□□□□□ -0.93
MSH6-204ENST00000445503 JMJD8Q96S16 334 aa9.23□□□□□ -0.93
MSH6-204ENST00000445503 C2orf91Q6ZV80 131 aa9.22□□□□□ -0.93
MSH6-204ENST00000445503 ZNF48Q96MX3 618 aaPredicted RBP9.22□□□□□ -0.93
MSH6-204ENST00000445503 CYSLTR1Q9Y271 337 aa9.22□□□□□ -0.93
MSH6-204ENST00000445503 TGFAP01135 160 aa9.22□□□□□ -0.93
MSH6-204ENST00000445503 PAX8Q06710 450 aa9.22□□□□□ -0.93
MSH6-204ENST00000445503 CLUHP3Q96NS8 147 aa9.22□□□□□ -0.93
MSH6-204ENST00000445503 TNRC18O15417 2968 aaPredicted RBP9.22□□□□□ -0.93
MSH6-204ENST00000445503 IGF2-ASQ6U949 168 aa9.22□□□□□ -0.93
MSH6-204ENST00000445503 BPESC1Q9GZL8 116 aa9.22□□□□□ -0.93
MSH6-204ENST00000445503 APOMO95445 188 aa9.21□□□□□ -0.93
MSH6-204ENST00000445503 ASIPP42127 132 aa9.21□□□□□ -0.93
MSH6-204ENST00000445503 C8orf86Q6ZUL3 223 aa9.21□□□□□ -0.93
MSH6-204ENST00000445503 ZNF479Q96JC4 524 aa9.21□□□□□ -0.93
MSH6-204ENST00000445503 CFAP47Q6ZTR5 3102 aa9.21□□□□□ -0.93
MSH6-204ENST00000445503 DCHS1Q96JQ0 3298 aa9.21□□□□□ -0.93
MSH6-204ENST00000445503 ZFP36P26651 326 aaKnown RBP9.21□□□□□ -0.93
MSH6-204ENST00000445503 FXYD2P54710 66 aa9.21□□□□□ -0.93
MSH6-204ENST00000445503 NEGR1Q7Z3B1 354 aa9.21□□□□□ -0.93
MSH6-204ENST00000445503 NPBQ8NG41 125 aa9.21□□□□□ -0.93
MSH6-204ENST00000445503 LINC01548A6NM66 108 aa9.21□□□□□ -0.94
MSH6-204ENST00000445503 H7C2G1 150 aa9.21□□□□□ -0.94
MSH6-204ENST00000445503 MINOS1Q5TGZ0 78 aa9.21□□□□□ -0.94
MSH6-204ENST00000445503 MINOS1-NBL1R4GNA1 71 aa9.21□□□□□ -0.94
MSH6-204ENST00000445503 ZFHX4Q86UP3 3567 aa9.21□□□□□ -0.94
MSH6-204ENST00000445503 K7EP34 96 aa9.2□□□□□ -0.94
MSH6-204ENST00000445503 TCF15Q12870 199 aa9.2□□□□□ -0.94
MSH6-204ENST00000445503 KLRB1Q12918 225 aa9.2□□□□□ -0.94
MSH6-204ENST00000445503 CD300EQ496F6 205 aaPredicted RBP9.2□□□□□ -0.94
MSH6-204ENST00000445503 A0A1W2PPM0 123 aa9.2□□□□□ -0.94
MSH6-204ENST00000445503 LY6LH3BQJ8 138 aa9.2□□□□□ -0.94
MSH6-204ENST00000445503 K7ENP7 123 aa9.2□□□□□ -0.94
MSH6-204ENST00000445503 CKS1BP61024 79 aa9.2□□□□□ -0.94
MSH6-204ENST00000445503 LY6DQ14210 128 aa9.2□□□□□ -0.94
MSH6-204ENST00000445503 ZNF493Q6ZR52 646 aa9.2□□□□□ -0.94
MSH6-204ENST00000445503 AMTNQ6UX39 209 aa9.2□□□□□ -0.94
MSH6-204ENST00000445503 OR5A1Q8NGJ0 315 aa9.2□□□□□ -0.94
MSH6-204ENST00000445503 CHTOPQ9Y3Y2 248 aaKnown RBP9.2□□□□□ -0.94
MSH6-204ENST00000445503 Q8N8P6 123 aa9.2□□□□□ -0.94
MSH6-204ENST00000445503 FAM110DQ8TAY7 271 aaPredicted RBP9.2□□□□□ -0.94
MSH6-204ENST00000445503 SMAD5-AS1Q9Y6J3 95 aa9.2□□□□□ -0.94
MSH6-204ENST00000445503 TACC2O95359 2948 aa9.19□□□□□ -0.94
MSH6-204ENST00000445503 TRAV41A0A0B4J266 112 aa9.19□□□□□ -0.94
MSH6-204ENST00000445503 TRBV6-1A0A0K0K1D8 114 aa9.19□□□□□ -0.94
MSH6-204ENST00000445503 TMEM170BQ5T4T1 132 aa9.19□□□□□ -0.94
MSH6-204ENST00000445503 MRPL16Q9NX20 251 aaKnown RBP9.19□□□□□ -0.94
MSH6-204ENST00000445503 KALRNO60229 2985 aa9.19□□□□□ -0.94
MSH6-204ENST00000445503 IGKV2D-26A0A0A0MRZ7 120 aa9.19□□□□□ -0.94
MSH6-204ENST00000445503 F6UB75 175 aa9.19□□□□□ -0.94
MSH6-204ENST00000445503 HOXB4P17483 251 aaPredicted RBP9.19□□□□□ -0.94
MSH6-204ENST00000445503 Q8N9W7 124 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms