RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 HLA-DQA1P01909 254 aa6.16□□□□□ -1.42
HDAC8-215ENST00000444609 NMBP08949 121 aa6.16□□□□□ -1.42
HDAC8-215ENST00000444609 PGAM2P15259 253 aa6.16□□□□□ -1.42
HDAC8-215ENST00000444609 PI3P19957 117 aa6.16□□□□□ -1.42
HDAC8-215ENST00000444609 PIGPP57054 158 aa6.16□□□□□ -1.42
HDAC8-215ENST00000444609 PRR9Q5T870 116 aa6.16□□□□□ -1.42
HDAC8-215ENST00000444609 ENHOQ6UWT2 76 aa6.16□□□□□ -1.42
HDAC8-215ENST00000444609 CLRN3Q8NCR9 226 aa6.16□□□□□ -1.42
HDAC8-215ENST00000444609 LINC00477Q96M19 166 aa6.16□□□□□ -1.42
HDAC8-215ENST00000444609 LINC00479Q96M42 142 aa6.16□□□□□ -1.42
HDAC8-215ENST00000444609 CACFD1Q9UGQ2 172 aa6.16□□□□□ -1.42
HDAC8-215ENST00000444609 FBLL1A6NHQ2 334 aaKnown RBP6.15□□□□□ -1.42
HDAC8-215ENST00000444609 CTDSP2O14595 271 aa6.15□□□□□ -1.42
HDAC8-215ENST00000444609 ZNF253O75346 499 aa6.15□□□□□ -1.42
HDAC8-215ENST00000444609 CDS2O95674 445 aa6.15□□□□□ -1.42
HDAC8-215ENST00000444609 SLPIP03973 132 aa6.15□□□□□ -1.42
HDAC8-215ENST00000444609 HLA-DMAP28067 261 aa6.15□□□□□ -1.42
HDAC8-215ENST00000444609 SDC2P34741 201 aa6.15□□□□□ -1.42
HDAC8-215ENST00000444609 RAB31Q13636 194 aa6.15□□□□□ -1.42
HDAC8-215ENST00000444609 LCE2CQ5TA81 110 aa6.15□□□□□ -1.42
HDAC8-215ENST00000444609 MZT2AQ6P582 158 aa6.15□□□□□ -1.42
HDAC8-215ENST00000444609 ZFAND2AQ8N6M9 145 aa6.15□□□□□ -1.42
HDAC8-215ENST00000444609 STPG4Q8N801 248 aa6.15□□□□□ -1.42
HDAC8-215ENST00000444609 DTD1Q8TEA8 209 aa6.15□□□□□ -1.42
HDAC8-215ENST00000444609 SAT2Q96F10 170 aaPredicted RBP6.15□□□□□ -1.42
HDAC8-215ENST00000444609 ZNF486Q96H40 463 aaPredicted RBP6.15□□□□□ -1.42
HDAC8-215ENST00000444609 AGPAT4-IT1Q9H0P7 198 aa6.15□□□□□ -1.42
HDAC8-215ENST00000444609 PXMP4Q9Y6I8 212 aa6.15□□□□□ -1.42
HDAC8-215ENST00000444609 SSPOA2VEC9 5147 aa6.14□□□□□ -1.43
HDAC8-215ENST00000444609 H3BTX0 84 aa6.14□□□□□ -1.43
HDAC8-215ENST00000444609 M0R2P5 195 aa6.14□□□□□ -1.43
HDAC8-215ENST00000444609 RGS5O15539 181 aa6.14□□□□□ -1.43
HDAC8-215ENST00000444609 TCRBP04435 133 aa6.14□□□□□ -1.43
HDAC8-215ENST00000444609 OR5G3P0C626 314 aa6.14□□□□□ -1.43
HDAC8-215ENST00000444609 PLP1P60201 277 aa6.14□□□□□ -1.43
HDAC8-215ENST00000444609 MAJINQ3KP22 176 aa6.14□□□□□ -1.43
HDAC8-215ENST00000444609 C22orf42Q6IC83 251 aa6.14□□□□□ -1.43
HDAC8-215ENST00000444609 CYB561D1Q8N8Q1 229 aa6.14□□□□□ -1.43
HDAC8-215ENST00000444609 OR5H6Q8NGV6 325 aa6.14□□□□□ -1.43
HDAC8-215ENST00000444609 SDHCQ99643 169 aaPredicted RBP6.14□□□□□ -1.43
HDAC8-215ENST00000444609 CHCHD7Q9BUK0 85 aa6.14□□□□□ -1.43
HDAC8-215ENST00000444609 SRRQ9GZT4 340 aa6.14□□□□□ -1.43
HDAC8-215ENST00000444609 A0A087WX48 190 aa6.13□□□□□ -1.43
HDAC8-215ENST00000444609 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.13□□□□□ -1.43
HDAC8-215ENST00000444609 CIDEAO60543 219 aa6.13□□□□□ -1.43
HDAC8-215ENST00000444609 RCVRNP35243 200 aa6.13□□□□□ -1.43
HDAC8-215ENST00000444609 GUK1Q16774 197 aa6.13□□□□□ -1.43
HDAC8-215ENST00000444609 MUC21Q5SSG8 566 aa6.13□□□□□ -1.43
HDAC8-215ENST00000444609 SNX29P2Q8IUI4 249 aa6.13□□□□□ -1.43
HDAC8-215ENST00000444609 LHFPL5Q8TAF8 219 aa6.13□□□□□ -1.43
HDAC8-215ENST00000444609 SUN5Q8TC36 379 aa6.13□□□□□ -1.43
HDAC8-215ENST00000444609 TRIM63Q969Q1 353 aa6.13□□□□□ -1.43
HDAC8-215ENST00000444609 RBKSQ9H477 322 aa6.13□□□□□ -1.43
HDAC8-215ENST00000444609 HSPB7Q9UBY9 170 aa6.13□□□□□ -1.43
HDAC8-215ENST00000444609 RNF24Q9Y225 148 aa6.13□□□□□ -1.43
HDAC8-215ENST00000444609 V9GYH0 126 aa6.13□□□□□ -1.43
HDAC8-215ENST00000444609 USH2AO75445 5202 aa6.13□□□□□ -1.43
HDAC8-215ENST00000444609 TMEM238LA0A1B0GVL6 79 aa6.12□□□□□ -1.43
HDAC8-215ENST00000444609 PGPA6NDG6 321 aa6.12□□□□□ -1.43
HDAC8-215ENST00000444609 TMEM127O75204 238 aa6.12□□□□□ -1.43
HDAC8-215ENST00000444609 B3GALNT1O75752 331 aa6.12□□□□□ -1.43
HDAC8-215ENST00000444609 IL5P05113 134 aa6.12□□□□□ -1.43
HDAC8-215ENST00000444609 LINC00694P0DN24 101 aa6.12□□□□□ -1.43
HDAC8-215ENST00000444609 UBE2MP61081 183 aaKnown RBP6.12□□□□□ -1.43
HDAC8-215ENST00000444609 CTAG1AP78358 180 aa6.12□□□□□ -1.43
HDAC8-215ENST00000444609 BAK1Q16611 211 aa6.12□□□□□ -1.43
HDAC8-215ENST00000444609 TMEM183BQ1AE95 376 aa6.12□□□□□ -1.43
HDAC8-215ENST00000444609 PATE2Q6UY27 113 aa6.12□□□□□ -1.43
HDAC8-215ENST00000444609 CYP2G1PQ6ZSU1 146 aa6.12□□□□□ -1.43
HDAC8-215ENST00000444609 S100A7AQ86SG5 101 aa6.12□□□□□ -1.43
HDAC8-215ENST00000444609 TMEM183AQ8IXX5 376 aa6.12□□□□□ -1.43
HDAC8-215ENST00000444609 SELENOHQ8IZQ5 122 aaKnown RBP6.12□□□□□ -1.43
HDAC8-215ENST00000444609 INO80EQ8NBZ0 244 aaPredicted RBP6.12□□□□□ -1.43
HDAC8-215ENST00000444609 DIRAS2Q96HU8 199 aa6.12□□□□□ -1.43
HDAC8-215ENST00000444609 SOSTQ9BQB4 213 aa6.12□□□□□ -1.43
HDAC8-215ENST00000444609 CDIP1Q9H305 208 aa6.12□□□□□ -1.43
HDAC8-215ENST00000444609 PAIP2BQ9ULR5 123 aaKnown RBP6.12□□□□□ -1.43
HDAC8-215ENST00000444609 MACF1Q9UPN3 7388 aaKnown RBP6.12□□□□□ -1.43
HDAC8-215ENST00000444609 IGLV1-50A0A075B6I6 118 aa6.11□□□□□ -1.43
HDAC8-215ENST00000444609 TRGV11A0A075B6L2 103 aa6.11□□□□□ -1.43
HDAC8-215ENST00000444609 IGHV3-73A0A0B4J1V6 119 aa6.11□□□□□ -1.43
HDAC8-215ENST00000444609 H3BQ15 152 aa6.11□□□□□ -1.43
HDAC8-215ENST00000444609 IFNA7P01567 189 aa6.11□□□□□ -1.43
HDAC8-215ENST00000444609 IGLC2P0DOY2 106 aa6.11□□□□□ -1.43
HDAC8-215ENST00000444609 RAB11AP62491 216 aa6.11□□□□□ -1.43
HDAC8-215ENST00000444609 COX6A2Q02221 97 aa6.11□□□□□ -1.43
HDAC8-215ENST00000444609 MXD1Q05195 221 aa6.11□□□□□ -1.43
HDAC8-215ENST00000444609 KRTAP26-1Q6PEX3 210 aa6.11□□□□□ -1.43
HDAC8-215ENST00000444609 MRPL53Q96EL3 112 aaKnown RBP6.11□□□□□ -1.43
HDAC8-215ENST00000444609 MIXL1Q9H2W2 232 aa6.11□□□□□ -1.43
HDAC8-215ENST00000444609 FCGBPQ9Y6R7 5405 aaPredicted RBP6.1□□□□□ -1.43
HDAC8-215ENST00000444609 IGKV2-24A0A0C4DH68 120 aa6.1□□□□□ -1.43
HDAC8-215ENST00000444609 hDV102S1A0JD36 115 aa6.1□□□□□ -1.43
HDAC8-215ENST00000444609 GAGE12JA6NER3 117 aa6.1□□□□□ -1.43
HDAC8-215ENST00000444609 PRSS46E5RG02 174 aa6.1□□□□□ -1.43
HDAC8-215ENST00000444609 CRPP02741 224 aa6.1□□□□□ -1.43
HDAC8-215ENST00000444609 LINC00869P0C866 280 aa6.1□□□□□ -1.43
HDAC8-215ENST00000444609 CFC1BP0CG36 223 aa6.1□□□□□ -1.43
HDAC8-215ENST00000444609 SULT1A3P0DMM9 295 aa6.1□□□□□ -1.43
HDAC8-215ENST00000444609 SULT1A4P0DMN0 295 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms