RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 C17orf77Q96MU5 243 aa3.96□□□□□ -1.78
HERC1-201ENST00000443617 SPRR3Q9UBC9 169 aa3.96□□□□□ -1.78
HERC1-201ENST00000443617 MTORP42345 2549 aa3.96□□□□□ -1.78
HERC1-201ENST00000443617 CRIP1P50238 77 aa3.96□□□□□ -1.78
HERC1-201ENST00000443617 SIGLEC9Q9Y336 463 aa3.96□□□□□ -1.78
HERC1-201ENST00000443617 IGLV2-23P01705 113 aa3.96□□□□□ -1.78
HERC1-201ENST00000443617 ZNF474Q6S9Z5 364 aaPredicted RBP3.95□□□□□ -1.78
HERC1-201ENST00000443617 RITA1Q96K30 269 aa3.95□□□□□ -1.78
HERC1-201ENST00000443617 YAE1D1Q9NRH1 226 aa3.95□□□□□ -1.78
HERC1-201ENST00000443617 SLC25A20O43772 301 aa3.95□□□□□ -1.78
HERC1-201ENST00000443617 TCL1BO95988 128 aa3.95□□□□□ -1.78
HERC1-201ENST00000443617 TIMD4Q96H15 378 aa3.95□□□□□ -1.78
HERC1-201ENST00000443617 A0A096LNJ9 63 aa3.95□□□□□ -1.78
HERC1-201ENST00000443617 C1orf122Q6ZSJ8 110 aa3.95□□□□□ -1.78
HERC1-201ENST00000443617 Q8N1Y9 231 aa3.95□□□□□ -1.78
HERC1-201ENST00000443617 PRR25Q96S07 402 aa3.95□□□□□ -1.78
HERC1-201ENST00000443617 C21orf62Q9NYP8 219 aa3.95□□□□□ -1.78
HERC1-201ENST00000443617 MSRB1Q9NZV6 116 aa3.95□□□□□ -1.78
HERC1-201ENST00000443617 NDUFA11Q86Y39 141 aa3.95□□□□□ -1.78
HERC1-201ENST00000443617 DYNLRB1Q9NP97 96 aa3.95□□□□□ -1.78
HERC1-201ENST00000443617 IGHG4P01861 327 aa3.95□□□□□ -1.78
HERC1-201ENST00000443617 SPANXDQ9BXN6 97 aa3.95□□□□□ -1.78
HERC1-201ENST00000443617 DUSP14O95147 198 aaKnown RBP3.95□□□□□ -1.78
HERC1-201ENST00000443617 TRAV12-1A0A0B4J245 112 aa3.95□□□□□ -1.78
HERC1-201ENST00000443617 CCL8P80075 99 aa3.95□□□□□ -1.78
HERC1-201ENST00000443617 AJUBAQ96IF1 538 aa3.95□□□□□ -1.78
HERC1-201ENST00000443617 PHLDA3Q9Y5J5 127 aa3.95□□□□□ -1.78
HERC1-201ENST00000443617 F8VRH5 84 aa3.94□□□□□ -1.78
HERC1-201ENST00000443617 EGR2P11161 476 aaPredicted RBP3.94□□□□□ -1.78
HERC1-201ENST00000443617 TRPT1Q86TN4 253 aaKnown RBP3.94□□□□□ -1.78
HERC1-201ENST00000443617 GATD1Q8NB37 220 aa3.94□□□□□ -1.78
HERC1-201ENST00000443617 LINC01619G3V211 115 aa3.94□□□□□ -1.78
HERC1-201ENST00000443617 CCL11P51671 97 aa3.94□□□□□ -1.78
HERC1-201ENST00000443617 MORN3Q6PF18 240 aaPredicted RBP3.94□□□□□ -1.78
HERC1-201ENST00000443617 UBTD1Q9HAC8 227 aa3.94□□□□□ -1.78
HERC1-201ENST00000443617 TRAV26-2A0A0B4J265 109 aa3.94□□□□□ -1.78
HERC1-201ENST00000443617 J3KRW8 73 aa3.94□□□□□ -1.78
HERC1-201ENST00000443617 RNF185Q96GF1 192 aa3.94□□□□□ -1.78
HERC1-201ENST00000443617 LINC01546A6NGU7 62 aa3.94□□□□□ -1.78
HERC1-201ENST00000443617 THBDP07204 575 aa3.94□□□□□ -1.78
HERC1-201ENST00000443617 TMEM170BQ5T4T1 132 aa3.94□□□□□ -1.78
HERC1-201ENST00000443617 MGPP08493 103 aa3.94□□□□□ -1.78
HERC1-201ENST00000443617 PIP4P2Q8N4L2 257 aa3.94□□□□□ -1.78
HERC1-201ENST00000443617 TMEM101Q96IK0 257 aa3.94□□□□□ -1.78
HERC1-201ENST00000443617 CEACAM4O75871 244 aa3.94□□□□□ -1.78
HERC1-201ENST00000443617 F8P00451 2351 aa3.94□□□□□ -1.78
HERC1-201ENST00000443617 PPP1R27Q86WC6 154 aa3.94□□□□□ -1.78
HERC1-201ENST00000443617 SLC50A1Q9BRV3 221 aa3.94□□□□□ -1.78
HERC1-201ENST00000443617 SIT1Q9Y3P8 196 aa3.94□□□□□ -1.78
HERC1-201ENST00000443617 TEX49A0A1B0GTD5 131 aa3.94□□□□□ -1.78
HERC1-201ENST00000443617 ASCL5Q7RTU5 278 aa3.94□□□□□ -1.78
HERC1-201ENST00000443617 IGHV1-46P01743 117 aa3.94□□□□□ -1.78
HERC1-201ENST00000443617 CCL3L1P16619 93 aa3.94□□□□□ -1.78
HERC1-201ENST00000443617 ZNF71Q9NQZ8 489 aaPredicted RBP3.94□□□□□ -1.78
HERC1-201ENST00000443617 IGKV3-15P01624 115 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 EMP1P54849 157 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 TPSG1Q9NRR2 321 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 PRB3Q04118 309 aaPredicted RBP3.93□□□□□ -1.78
HERC1-201ENST00000443617 DSCAMO60469 2012 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.93□□□□□ -1.78
HERC1-201ENST00000443617 RNASE4P34096 147 aaKnown RBP3.93□□□□□ -1.78
HERC1-201ENST00000443617 PRR30Q53SZ7 412 aaPredicted RBP3.93□□□□□ -1.78
HERC1-201ENST00000443617 C9orf106Q8NAJ2 232 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 H3BRN7 92 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 E7EUB6 86 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 KHDC1LQ5JSQ8 128 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 GLRXP35754 106 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 RPL11P62913 178 aaKnown RBP3.93□□□□□ -1.78
HERC1-201ENST00000443617 IGFL4Q6B9Z1 124 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 CARD19Q96LW7 228 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 RNF5Q99942 180 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 SRD5A1P18405 259 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 SPRNQ5BIV9 151 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 IL17RELQ6ZVW7 336 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 TDHQ8IZJ6 230 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 ABCA12Q86UK0 2595 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 EFNA4P52798 201 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 TRAV17A0A0B4J275 112 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 SHISA2Q6UWI4 295 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 METTL26Q96S19 204 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 SMIM2Q9BVW6 85 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 CFC1BP0CG36 223 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 CFC1P0CG37 223 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 S4R3C0 116 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 IGHV1-18A0A0C4DH31 117 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 PAX8Q06710 450 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 DUX4L9Q6RFH8 374 aaPredicted RBP3.93□□□□□ -1.78
HERC1-201ENST00000443617 TMEM141Q96I45 108 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 EP400Q96L91 3159 aa3.93□□□□□ -1.78
HERC1-201ENST00000443617 LPAL2Q16609 132 aa3.92□□□□□ -1.78
HERC1-201ENST00000443617 FAM57AQ8TBR7 257 aa3.92□□□□□ -1.78
HERC1-201ENST00000443617 M0R381 172 aa3.92□□□□□ -1.78
HERC1-201ENST00000443617 C8orf31Q8N9H6 132 aa3.92□□□□□ -1.78
HERC1-201ENST00000443617 PLEKHB2Q96CS7 222 aa3.92□□□□□ -1.78
HERC1-201ENST00000443617 ADAMTS20P59510 1910 aa3.92□□□□□ -1.78
HERC1-201ENST00000443617 ERCC8Q13216 396 aa3.92□□□□□ -1.78
HERC1-201ENST00000443617 TRBV7-3A0A075B6L6 115 aa3.92□□□□□ -1.78
HERC1-201ENST00000443617 VCYO14598 125 aa3.92□□□□□ -1.78
HERC1-201ENST00000443617 Q71RC1 249 aaPredicted RBP3.92□□□□□ -1.78
HERC1-201ENST00000443617 GAS8-AS1O95177 125 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms