RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 ZNF493Q6ZR52 646 aa11.01□□□□□ -0.65
MCF2L-218ENST00000442625 Q8NA96 180 aa11.01□□□□□ -0.65
MCF2L-218ENST00000442625 WI2-2373I1.2A0A1W2PRP0 233 aa11.01□□□□□ -0.65
MCF2L-218ENST00000442625 LINC01560Q8TB33 94 aa11.01□□□□□ -0.65
MCF2L-218ENST00000442625 UBTD1Q9HAC8 227 aa11.01□□□□□ -0.65
MCF2L-218ENST00000442625 JKAMPQ9P055 326 aa11.01□□□□□ -0.65
MCF2L-218ENST00000442625 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11□□□□□ -0.65
MCF2L-218ENST00000442625 GATD1Q8NB37 220 aa11□□□□□ -0.65
MCF2L-218ENST00000442625 U3KQK5 164 aa11□□□□□ -0.65
MCF2L-218ENST00000442625 KLRD1Q13241 179 aa11□□□□□ -0.65
MCF2L-218ENST00000442625 GTSCR1Q86UQ5 136 aa11□□□□□ -0.65
MCF2L-218ENST00000442625 ZNF575Q86XF7 245 aa11□□□□□ -0.65
MCF2L-218ENST00000442625 NPFFR1Q9GZQ6 430 aa11□□□□□ -0.65
MCF2L-218ENST00000442625 HES1Q14469 280 aa11□□□□□ -0.65
MCF2L-218ENST00000442625 ANAPC13Q9BS18 74 aa11□□□□□ -0.65
MCF2L-218ENST00000442625 LEPP41159 167 aa10.99□□□□□ -0.65
MCF2L-218ENST00000442625 MRPL23Q16540 153 aaKnown RBP10.99□□□□□ -0.65
MCF2L-218ENST00000442625 AAMDCQ9H7C9 122 aa10.99□□□□□ -0.65
MCF2L-218ENST00000442625 ORM1P02763 201 aa10.99□□□□□ -0.65
MCF2L-218ENST00000442625 ERCC8Q13216 396 aa10.99□□□□□ -0.65
MCF2L-218ENST00000442625 SAMD5Q5TGI4 173 aa10.99□□□□□ -0.65
MCF2L-218ENST00000442625 A0A087WX48 190 aa10.98□□□□□ -0.65
MCF2L-218ENST00000442625 TRBV6-1A0A0K0K1D8 114 aa10.98□□□□□ -0.65
MCF2L-218ENST00000442625 TEX48A0A1B0GUV7 120 aa10.98□□□□□ -0.65
MCF2L-218ENST00000442625 LY6LH3BQJ8 138 aa10.98□□□□□ -0.65
MCF2L-218ENST00000442625 PRSS1P07477 247 aa10.98□□□□□ -0.65
MCF2L-218ENST00000442625 OR9G4Q8NGQ1 327 aa10.98□□□□□ -0.65
MCF2L-218ENST00000442625 AGRNO00468 2067 aa10.98□□□□□ -0.65
MCF2L-218ENST00000442625 J3QR89 54 aa10.98□□□□□ -0.65
MCF2L-218ENST00000442625 GRNP28799 593 aaKnown RBP10.98□□□□□ -0.65
MCF2L-218ENST00000442625 PRR25Q96S07 402 aa10.98□□□□□ -0.65
MCF2L-218ENST00000442625 CELSR1Q9NYQ6 3014 aa10.97□□□□□ -0.65
MCF2L-218ENST00000442625 NBR2O15453 112 aa10.97□□□□□ -0.65
MCF2L-218ENST00000442625 CD3EP07766 207 aa10.97□□□□□ -0.65
MCF2L-218ENST00000442625 Q6AWC8 147 aa10.97□□□□□ -0.65
MCF2L-218ENST00000442625 FABP2P12104 132 aa10.97□□□□□ -0.65
MCF2L-218ENST00000442625 OR4X2Q8NGF9 303 aa10.97□□□□□ -0.65
MCF2L-218ENST00000442625 RNF185Q96GF1 192 aa10.97□□□□□ -0.65
MCF2L-218ENST00000442625 NHP2Q9NX24 153 aaKnown RBP10.97□□□□□ -0.65
MCF2L-218ENST00000442625 IGHV3OR16-13A0A075B7E8 117 aa10.96□□□□□ -0.65
MCF2L-218ENST00000442625 IGHV3-74A0A0B4J1X5 117 aa10.96□□□□□ -0.65
MCF2L-218ENST00000442625 IGHV3-66A0A0C4DH42 116 aa10.96□□□□□ -0.65
MCF2L-218ENST00000442625 Q6ZQT7 251 aa10.96□□□□□ -0.65
MCF2L-218ENST00000442625 FOXC2Q99958 501 aa10.96□□□□□ -0.65
MCF2L-218ENST00000442625 HHLA3Q9XRX5 114 aa10.96□□□□□ -0.65
MCF2L-218ENST00000442625 PRAC2D3DTV9 90 aa10.96□□□□□ -0.66
MCF2L-218ENST00000442625 SMIM13P0DJ93 91 aa10.96□□□□□ -0.66
MCF2L-218ENST00000442625 RNF182Q8N6D2 247 aa10.96□□□□□ -0.66
MCF2L-218ENST00000442625 C1QTNF4Q9BXJ3 329 aa10.96□□□□□ -0.66
MCF2L-218ENST00000442625 TRAV26-2A0A0B4J265 109 aa10.95□□□□□ -0.66
MCF2L-218ENST00000442625 SEC61GP60059 68 aa10.95□□□□□ -0.66
MCF2L-218ENST00000442625 LCNL1Q6ZST4 164 aa10.95□□□□□ -0.66
MCF2L-218ENST00000442625 CHAC1Q9BUX1 264 aa10.95□□□□□ -0.66
MCF2L-218ENST00000442625 F8W735 103 aaPredicted RBP10.95□□□□□ -0.66
MCF2L-218ENST00000442625 IGHG4P01861 327 aa10.95□□□□□ -0.66
MCF2L-218ENST00000442625 NDPQ00604 133 aa10.95□□□□□ -0.66
MCF2L-218ENST00000442625 ZNF672Q499Z4 452 aaPredicted RBP10.95□□□□□ -0.66
MCF2L-218ENST00000442625 LYPD1Q8N2G4 141 aa10.95□□□□□ -0.66
MCF2L-218ENST00000442625 FANCD2OSQ96PS1 177 aa10.95□□□□□ -0.66
MCF2L-218ENST00000442625 SMAD5-AS1Q9Y6J3 95 aa10.95□□□□□ -0.66
MCF2L-218ENST00000442625 TLN1Q9Y490 2541 aaKnown RBP10.95□□□□□ -0.66
MCF2L-218ENST00000442625 FAM90A27PA6NNH2 459 aa10.94□□□□□ -0.66
MCF2L-218ENST00000442625 NCBP2LA6PVI3 153 aaKnown RBP10.94□□□□□ -0.66
MCF2L-218ENST00000442625 TMEM158Q8WZ71 300 aa10.94□□□□□ -0.66
MCF2L-218ENST00000442625 SPRY2O43597 315 aa10.94□□□□□ -0.66
MCF2L-218ENST00000442625 UCNP55089 124 aa10.94□□□□□ -0.66
MCF2L-218ENST00000442625 ZC2HC1BQ5TFG8 222 aa10.94□□□□□ -0.66
MCF2L-218ENST00000442625 MAPKAPK5-AS1Q8N8E1 139 aa10.94□□□□□ -0.66
MCF2L-218ENST00000442625 COL25A1Q9BXS0 654 aaPredicted RBP10.94□□□□□ -0.66
MCF2L-218ENST00000442625 DPM3Q9P2X0 92 aa10.94□□□□□ -0.66
MCF2L-218ENST00000442625 TRBV25-1A0A075B6N4 114 aa10.93□□□□□ -0.66
MCF2L-218ENST00000442625 F5H768 121 aa10.93□□□□□ -0.66
MCF2L-218ENST00000442625 TRGV3P03979 118 aa10.93□□□□□ -0.66
MCF2L-218ENST00000442625 WFDC2Q14508 124 aa10.93□□□□□ -0.66
MCF2L-218ENST00000442625 AMTNQ6UX39 209 aa10.93□□□□□ -0.66
MCF2L-218ENST00000442625 MAP1LC3AQ9H492 121 aa10.93□□□□□ -0.66
MCF2L-218ENST00000442625 SPTBN1Q01082 2364 aaKnown RBP10.93□□□□□ -0.66
MCF2L-218ENST00000442625 CEP295Q9C0D2 2601 aa10.93□□□□□ -0.66
MCF2L-218ENST00000442625 TRAV40A0A0B4J280 105 aa10.93□□□□□ -0.66
MCF2L-218ENST00000442625 TMEM8BA6NDV4 472 aa10.93□□□□□ -0.66
MCF2L-218ENST00000442625 PRTN3P24158 256 aa10.93□□□□□ -0.66
MCF2L-218ENST00000442625 DYNAPQ8N1N2 210 aa10.93□□□□□ -0.66
MCF2L-218ENST00000442625 SPTA1P02549 2419 aa10.93□□□□□ -0.66
MCF2L-218ENST00000442625 IGHV3-49A0A0A0MS15 119 aa10.93□□□□□ -0.66
MCF2L-218ENST00000442625 IGLC6P0CF74 106 aa10.93□□□□□ -0.66
MCF2L-218ENST00000442625 RNF5Q99942 180 aa10.93□□□□□ -0.66
MCF2L-218ENST00000442625 HRNRQ86YZ3 2850 aaPredicted RBP10.92□□□□□ -0.66
MCF2L-218ENST00000442625 IGLV11-55A0A075B6I3 123 aa10.92□□□□□ -0.66
MCF2L-218ENST00000442625 SH2D6Q7Z4S9 175 aa10.92□□□□□ -0.66
MCF2L-218ENST00000442625 PTPRZ1P23471 2315 aaPredicted RBP10.92□□□□□ -0.66
MCF2L-218ENST00000442625 ANKHD1Q8IWZ3 2542 aaKnown RBP10.92□□□□□ -0.66
MCF2L-218ENST00000442625 C21orf62Q9NYP8 219 aa10.92□□□□□ -0.66
MCF2L-218ENST00000442625 IGKCP01834 107 aa10.91□□□□□ -0.66
MCF2L-218ENST00000442625 FCER1GP30273 86 aa10.91□□□□□ -0.66
MCF2L-218ENST00000442625 IL17RELQ6ZVW7 336 aa10.91□□□□□ -0.66
MCF2L-218ENST00000442625 OR5A1Q8NGJ0 315 aa10.91□□□□□ -0.66
MCF2L-218ENST00000442625 ARPC1AQ92747 370 aa10.91□□□□□ -0.66
MCF2L-218ENST00000442625 SRSF8Q9BRL6 282 aaKnown RBP10.91□□□□□ -0.66
MCF2L-218ENST00000442625 MRPL35Q9NZE8 188 aaKnown RBP10.91□□□□□ -0.66
MCF2L-218ENST00000442625 AKAP6Q13023 2319 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms