RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 ZFP30Q9Y2G7 519 aa3.68□□□□□ -1.82
CCDC140-202ENST00000440903 TRAV21A0A0B4J279 112 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 TRBV6-1A0A0K0K1D8 114 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 C7orf71A4D174 169 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 ZNF727A8MUV8 499 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 C9JCJ5 164 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 H7BYZ3 331 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 J3KRW8 73 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 K7EIL1 84 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 FRMD6-AS1P0C7T7 363 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 ZNF705DP0CH99 300 aaPredicted RBP3.67□□□□□ -1.82
CCDC140-202ENST00000440903 ZNF705BP0CI00 300 aaPredicted RBP3.67□□□□□ -1.82
CCDC140-202ENST00000440903 MGST1P10620 155 aaKnown RBP3.67□□□□□ -1.82
CCDC140-202ENST00000440903 RPL35P42766 123 aaKnown RBP3.67□□□□□ -1.82
CCDC140-202ENST00000440903 CCL20P78556 96 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 DEFA6Q01524 100 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 TMEM183BQ1AE95 376 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 SPINK13Q1W4C9 94 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 CENPWQ5EE01 88 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 SOHLH1Q5JUK2 328 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 GDF5OSQ5U4N7 250 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 Q6ZWC4 215 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 COMMD7Q86VX2 200 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 BAGE2Q86Y30 109 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 CCDC28AQ8IWP9 274 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 Q8N1Y9 231 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 Q8TAT8 98 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 DAZAP1Q96EP5 407 aaKnown RBP3.67□□□□□ -1.82
CCDC140-202ENST00000440903 IGF2BP2-AS1Q96M15 143 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 RCHY1Q96PM5 261 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 SMIM7Q9BQ49 75 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 SLC35B3Q9H1N7 401 aa3.67□□□□□ -1.82
CCDC140-202ENST00000440903 TRGV11A0A075B6L2 103 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 IGHV3OR16-12A0A075B7B8 117 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 TRAV8-1A0A0A6YYK1 113 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 TEX48A0A1B0GUV7 120 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 XKRY2A2RUG3 117 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 PRAC2D3DTV9 90 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 M0R2Z0 102 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 GCGP01275 180 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 PRB2P02812 416 aaPredicted RBP3.66□□□□□ -1.82
CCDC140-202ENST00000440903 SFTA3P0C7M3 94 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 CRISP2P16562 243 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 FXYD7P58549 80 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 DEFB1P60022 68 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 IFITM2Q01629 132 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 ERCC8Q13216 396 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 DEFB135Q30KP9 77 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 FAM162BQ5T6X4 162 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 GFI1BQ5VTD9 330 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 PRR27Q6MZM9 219 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 FAM159AQ6UWV7 190 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 C2CD4CQ8TF44 421 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 KCNS1Q96KK3 526 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 ASCL2Q99929 193 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 VGLL1Q99990 258 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 PYGO2Q9BRQ0 406 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 AGPAT4-IT1Q9H0P7 198 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 PARLQ9H300 379 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 SDF2L1Q9HCN8 221 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 XCL2Q9UBD3 114 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 NAGKQ9UJ70 344 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 TP53TG1Q9Y2A0 90 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 MGAM2Q2M2H8 2515 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 DNHD1Q96M86 4753 aa3.66□□□□□ -1.82
CCDC140-202ENST00000440903 TRAV12-3A0A0B4J271 114 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 TRAV34A0A0B4J273 112 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 TMEM189A5PLL7 270 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 LINC00862A6NCI5 91 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 CBY3A6NI87 242 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 A8MTW9 85 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 SNURFLB1AK76 121 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 KLLNB2CW77 178 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 F8W036 122 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 SPRY2O43597 315 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 LTAP01374 205 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 PFN1P07737 140 aaKnown RBP3.65□□□□□ -1.83
CCDC140-202ENST00000440903 SRP19P09132 144 aaKnown RBP3.65□□□□□ -1.83
CCDC140-202ENST00000440903 NHLRC4P0CG21 123 aaPredicted RBP3.65□□□□□ -1.83
CCDC140-202ENST00000440903 RNASE4P34096 147 aaKnown RBP3.65□□□□□ -1.83
CCDC140-202ENST00000440903 RPS20P60866 119 aaKnown RBP3.65□□□□□ -1.83
CCDC140-202ENST00000440903 ZNF415Q09FC8 603 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 PNRC1Q12796 327 aaPredicted RBP3.65□□□□□ -1.83
CCDC140-202ENST00000440903 BTN1A1Q13410 526 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 OR5I1Q13606 314 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 RRN3P1Q2M238 152 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 TMEM183AQ8IXX5 376 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 C15orf54Q8N8G6 183 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 BORCS7Q96B45 105 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 C16orf74Q96GX8 76 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 SGK494Q96LW2 274 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 LINC01587Q99440 93 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 RARRES2Q99969 163 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 B9D2Q9BPU9 175 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 NAT8Q9UHE5 227 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 KLF12Q9Y4X4 402 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 LY96Q9Y6Y9 160 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 NOTCH3Q9UM47 2321 aa3.65□□□□□ -1.83
CCDC140-202ENST00000440903 TRAV12-2A0A075B6T6 113 aa3.64□□□□□ -1.83
CCDC140-202ENST00000440903 IGHV1OR15-1A0A075B7D0 117 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms