RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 PYGO2Q9BRQ0 406 aa14.26□□□□□ -0.13
SNX17-203ENST00000440760 SPINK4O60575 86 aa14.25□□□□□ -0.13
SNX17-203ENST00000440760 PRR9Q5T870 116 aa14.25□□□□□ -0.13
SNX17-203ENST00000440760 COX8CQ7Z4L0 72 aa14.25□□□□□ -0.13
SNX17-203ENST00000440760 SMIM27A0A1W2PRY6 76 aa14.25□□□□□ -0.13
SNX17-203ENST00000440760 FAM162BQ5T6X4 162 aa14.25□□□□□ -0.13
SNX17-203ENST00000440760 OR2D3Q8NGH3 330 aa14.25□□□□□ -0.13
SNX17-203ENST00000440760 Q6ZQT7 251 aa14.24□□□□□ -0.13
SNX17-203ENST00000440760 NEU1Q99519 415 aa14.24□□□□□ -0.13
SNX17-203ENST00000440760 CITED1Q99966 193 aa14.24□□□□□ -0.13
SNX17-203ENST00000440760 TMSB15BA0A087X1C1 80 aa14.23□□□□□ -0.13
SNX17-203ENST00000440760 IGKV3-20P01619 116 aa14.23□□□□□ -0.13
SNX17-203ENST00000440760 FRMD6-AS1P0C7T7 363 aa14.23□□□□□ -0.13
SNX17-203ENST00000440760 ZNF124Q15973 351 aa14.23□□□□□ -0.13
SNX17-203ENST00000440760 SPATA3Q8NHX4 192 aa14.23□□□□□ -0.13
SNX17-203ENST00000440760 FABP9Q0Z7S8 132 aa14.23□□□□□ -0.13
SNX17-203ENST00000440760 KIR3DS1Q14943 382 aa14.23□□□□□ -0.13
SNX17-203ENST00000440760 PRIMA1Q86XR5 153 aa14.23□□□□□ -0.13
SNX17-203ENST00000440760 LINC00482Q8N8I6 264 aa14.23□□□□□ -0.13
SNX17-203ENST00000440760 TSKUQ8WUA8 353 aa14.23□□□□□ -0.13
SNX17-203ENST00000440760 LINC00477Q96M19 166 aa14.23□□□□□ -0.13
SNX17-203ENST00000440760 GSN-AS1Q9NRJ2 163 aa14.23□□□□□ -0.13
SNX17-203ENST00000440760 SIGLEC8Q9NYZ4 499 aa14.23□□□□□ -0.13
SNX17-203ENST00000440760 DEFB131AP59861 70 aa14.22□□□□□ -0.13
SNX17-203ENST00000440760 GTSF1Q8WW33 167 aa14.22□□□□□ -0.13
SNX17-203ENST00000440760 A0A0J9YX75 114 aa14.22□□□□□ -0.13
SNX17-203ENST00000440760 HIGD1CA8MV81 97 aa14.22□□□□□ -0.13
SNX17-203ENST00000440760 ZFAND2AQ8N6M9 145 aa14.22□□□□□ -0.13
SNX17-203ENST00000440760 OR4B1Q8NGF8 309 aa14.22□□□□□ -0.13
SNX17-203ENST00000440760 PPP1R14DQ9NXH3 145 aa14.22□□□□□ -0.13
SNX17-203ENST00000440760 FBN1P35555 2871 aaKnown RBP14.21□□□□□ -0.13
SNX17-203ENST00000440760 CT83Q5H943 113 aa14.21□□□□□ -0.13
SNX17-203ENST00000440760 NUP35Q8NFH5 326 aa14.21□□□□□ -0.13
SNX17-203ENST00000440760 MAP6D1Q9H9H5 199 aa14.21□□□□□ -0.13
SNX17-203ENST00000440760 NIT2Q9NQR4 276 aa14.21□□□□□ -0.13
SNX17-203ENST00000440760 ZNF256Q9Y2P7 627 aaPredicted RBP14.21□□□□□ -0.13
SNX17-203ENST00000440760 KNCNA6PVL3 124 aa14.2□□□□□ -0.14
SNX17-203ENST00000440760 LINC00587B1AMM8 73 aa14.2□□□□□ -0.14
SNX17-203ENST00000440760 MRPL54Q6P161 138 aaKnown RBP14.2□□□□□ -0.14
SNX17-203ENST00000440760 BTF3L4Q96K17 158 aa14.2□□□□□ -0.14
SNX17-203ENST00000440760 FAM19A4Q96LR4 140 aa14.2□□□□□ -0.14
SNX17-203ENST00000440760 SPAG8Q99932 426 aaPredicted RBP14.2□□□□□ -0.14
SNX17-203ENST00000440760 TRAV2A0A0B4J234 112 aa14.2□□□□□ -0.14
SNX17-203ENST00000440760 OR4C46A6NHA9 309 aa14.2□□□□□ -0.14
SNX17-203ENST00000440760 A8MWL6 223 aa14.2□□□□□ -0.14
SNX17-203ENST00000440760 C11orf21Q9P2W6 132 aa14.2□□□□□ -0.14
SNX17-203ENST00000440760 TRRAPQ9Y4A5 3859 aa14.2□□□□□ -0.14
SNX17-203ENST00000440760 TRGC2P03986 189 aa14.19□□□□□ -0.14
SNX17-203ENST00000440760 TYMSP04818 313 aa14.19□□□□□ -0.14
SNX17-203ENST00000440760 EBLN2Q6P2I7 272 aa14.19□□□□□ -0.14
SNX17-203ENST00000440760 SRD5A3Q9H8P0 318 aa14.19□□□□□ -0.14
SNX17-203ENST00000440760 NAT8BQ9UHF3 227 aa14.19□□□□□ -0.14
SNX17-203ENST00000440760 LENEPQ9Y5L5 61 aa14.19□□□□□ -0.14
SNX17-203ENST00000440760 TMEM189A5PLL7 270 aa14.18□□□□□ -0.14
SNX17-203ENST00000440760 FABP5P3A8MUU1 101 aa14.18□□□□□ -0.14
SNX17-203ENST00000440760 ACTL10Q5JWF8 245 aa14.18□□□□□ -0.14
SNX17-203ENST00000440760 FOXI2Q6ZQN5 318 aa14.18□□□□□ -0.14
SNX17-203ENST00000440760 APRG1Q8IVJ8 170 aa14.18□□□□□ -0.14
SNX17-203ENST00000440760 PGLYRP4Q96LB8 373 aa14.18□□□□□ -0.14
SNX17-203ENST00000440760 TRAV9-1A0A075B6T8 112 aa14.18□□□□□ -0.14
SNX17-203ENST00000440760 TRAV25A0A0B4J276 109 aa14.18□□□□□ -0.14
SNX17-203ENST00000440760 IGLV1-51P01701 117 aa14.18□□□□□ -0.14
SNX17-203ENST00000440760 ORM1P02763 201 aa14.18□□□□□ -0.14
SNX17-203ENST00000440760 ODF3L2Q3SX64 289 aa14.17□□□□□ -0.14
SNX17-203ENST00000440760 TPPP3Q9BW30 176 aa14.17□□□□□ -0.14
SNX17-203ENST00000440760 GPX1P07203 203 aa14.16□□□□□ -0.14
SNX17-203ENST00000440760 RNASE4P34096 147 aaKnown RBP14.16□□□□□ -0.14
SNX17-203ENST00000440760 PRR31Q5SQ13 230 aa14.16□□□□□ -0.14
SNX17-203ENST00000440760 NOTCH3Q9UM47 2321 aa14.16□□□□□ -0.14
SNX17-203ENST00000440760 GRIFINA4D1Z8 144 aa14.16□□□□□ -0.14
SNX17-203ENST00000440760 M0R2Z0 102 aa14.16□□□□□ -0.14
SNX17-203ENST00000440760 CRISP2P16562 243 aa14.16□□□□□ -0.14
SNX17-203ENST00000440760 ZNF575Q86XF7 245 aa14.16□□□□□ -0.14
SNX17-203ENST00000440760 IGKV3D-20A0A0C4DH25 116 aa14.15□□□□□ -0.14
SNX17-203ENST00000440760 HOXA5P20719 270 aa14.15□□□□□ -0.14
SNX17-203ENST00000440760 GFRA4Q9GZZ7 299 aa14.15□□□□□ -0.14
SNX17-203ENST00000440760 NAGKQ9UJ70 344 aa14.15□□□□□ -0.14
SNX17-203ENST00000440760 STAB1Q9NY15 2570 aa14.14□□□□□ -0.15
SNX17-203ENST00000440760 SPINK13Q1W4C9 94 aa14.14□□□□□ -0.15
SNX17-203ENST00000440760 LINC01559Q495D7 138 aa14.14□□□□□ -0.15
SNX17-203ENST00000440760 TRAV12-2A0A075B6T6 113 aa14.14□□□□□ -0.15
SNX17-203ENST00000440760 KLLNB2CW77 178 aa14.14□□□□□ -0.15
SNX17-203ENST00000440760 HLA-DRB4P13762 266 aa14.14□□□□□ -0.15
SNX17-203ENST00000440760 FXYD7P58549 80 aa14.14□□□□□ -0.15
SNX17-203ENST00000440760 HLA-DRB4X5D2U9 266 aa14.14□□□□□ -0.15
SNX17-203ENST00000440760 MUC21A0A0G2JKD1 596 aa14.13□□□□□ -0.15
SNX17-203ENST00000440760 MUC21A0A140T8X8 626 aa14.13□□□□□ -0.15
SNX17-203ENST00000440760 RBMY1BA6NDE4 496 aaKnown RBP14.13□□□□□ -0.15
SNX17-203ENST00000440760 RBMY1EA6NEQ0 496 aaKnown RBP14.13□□□□□ -0.15
SNX17-203ENST00000440760 PHOX2AO14813 284 aa14.13□□□□□ -0.15
SNX17-203ENST00000440760 DUSP14O95147 198 aaKnown RBP14.13□□□□□ -0.15
SNX17-203ENST00000440760 RBMY1DP0C7P1 496 aaKnown RBP14.13□□□□□ -0.15
SNX17-203ENST00000440760 MUC21Q5SSG8 566 aa14.13□□□□□ -0.15
SNX17-203ENST00000440760 AMTNQ6UX39 209 aa14.13□□□□□ -0.15
SNX17-203ENST00000440760 FRZBQ92765 325 aa14.13□□□□□ -0.15
SNX17-203ENST00000440760 SNURFLB1AK76 121 aa14.13□□□□□ -0.15
SNX17-203ENST00000440760 SSTP61278 116 aa14.13□□□□□ -0.15
SNX17-203ENST00000440760 TRBV7-9A0A0J9YWB2 115 aa14.12□□□□□ -0.15
SNX17-203ENST00000440760 FAM231BA6NCW3 169 aa14.12□□□□□ -0.15
SNX17-203ENST00000440760 H3BMM0 161 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms