RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 SCGB1C2P0DMR2 95 aa9.21□□□□□ -0.93
SMPD4-209ENST00000439886 CR1LQ2VPA4 569 aa9.21□□□□□ -0.93
SMPD4-209ENST00000439886 ZNF474Q6S9Z5 364 aaPredicted RBP9.21□□□□□ -0.93
SMPD4-209ENST00000439886 ZNF502Q8TBZ5 544 aa9.21□□□□□ -0.93
SMPD4-209ENST00000439886 RNF125Q96EQ8 232 aa9.21□□□□□ -0.93
SMPD4-209ENST00000439886 MRPL35Q9NZE8 188 aaKnown RBP9.21□□□□□ -0.93
SMPD4-209ENST00000439886 IGLL5B9A064 214 aa9.21□□□□□ -0.94
SMPD4-209ENST00000439886 FSTL3O95633 263 aa9.21□□□□□ -0.94
SMPD4-209ENST00000439886 PPP1R27Q86WC6 154 aa9.21□□□□□ -0.94
SMPD4-209ENST00000439886 CEND1Q8N111 149 aa9.21□□□□□ -0.94
SMPD4-209ENST00000439886 MGAQ8IWI9 3026 aa9.21□□□□□ -0.94
SMPD4-209ENST00000439886 H7C2G1 150 aa9.21□□□□□ -0.94
SMPD4-209ENST00000439886 SPRY2O43597 315 aa9.21□□□□□ -0.94
SMPD4-209ENST00000439886 LHBP01229 141 aa9.21□□□□□ -0.94
SMPD4-209ENST00000439886 IGLV2-11P01706 119 aa9.21□□□□□ -0.94
SMPD4-209ENST00000439886 LINC00694P0DN24 101 aa9.21□□□□□ -0.94
SMPD4-209ENST00000439886 WT1P19544 449 aaPredicted RBP9.21□□□□□ -0.94
SMPD4-209ENST00000439886 EFNA4P52798 201 aa9.21□□□□□ -0.94
SMPD4-209ENST00000439886 LYNX1G3V0Z9 82 aa9.2□□□□□ -0.94
SMPD4-209ENST00000439886 LYNX1P0DP58 116 aa9.2□□□□□ -0.94
SMPD4-209ENST00000439886 EGR2P11161 476 aaPredicted RBP9.2□□□□□ -0.94
SMPD4-209ENST00000439886 DUX5Q96PT3 197 aa9.2□□□□□ -0.94
SMPD4-209ENST00000439886 C12orf74Q32Q52 190 aa9.2□□□□□ -0.94
SMPD4-209ENST00000439886 PCSK5Q92824 1860 aa9.2□□□□□ -0.94
SMPD4-209ENST00000439886 IGLV1-44P01699 117 aa9.2□□□□□ -0.94
SMPD4-209ENST00000439886 ERCC8Q13216 396 aa9.2□□□□□ -0.94
SMPD4-209ENST00000439886 VKORC1Q9BQB6 163 aa9.2□□□□□ -0.94
SMPD4-209ENST00000439886 COL6A6A6NMZ7 2263 aa9.19□□□□□ -0.94
SMPD4-209ENST00000439886 FHL3Q13643 280 aa9.19□□□□□ -0.94
SMPD4-209ENST00000439886 MAPKAPK5-AS1Q8N8E1 139 aa9.19□□□□□ -0.94
SMPD4-209ENST00000439886 ADGRG4Q8IZF6 3080 aa9.19□□□□□ -0.94
SMPD4-209ENST00000439886 DEFB123Q8N688 67 aa9.19□□□□□ -0.94
SMPD4-209ENST00000439886 SIGLEC9Q9Y336 463 aa9.19□□□□□ -0.94
SMPD4-209ENST00000439886 IGLV2-23P01705 113 aa9.18□□□□□ -0.94
SMPD4-209ENST00000439886 CD40P25942 277 aa9.18□□□□□ -0.94
SMPD4-209ENST00000439886 FAM19A5Q7Z5A7 132 aaPredicted RBP9.18□□□□□ -0.94
SMPD4-209ENST00000439886 OR13C6PQ8NH95 151 aa9.18□□□□□ -0.94
SMPD4-209ENST00000439886 EDA2RQ9HAV5 297 aa9.18□□□□□ -0.94
SMPD4-209ENST00000439886 TRAV17A0A0B4J275 112 aa9.18□□□□□ -0.94
SMPD4-209ENST00000439886 SIGLEC15Q6ZMC9 328 aa9.18□□□□□ -0.94
SMPD4-209ENST00000439886 CREBBPQ92793 2442 aa9.18□□□□□ -0.94
SMPD4-209ENST00000439886 CENPVL3A0A0U1RRI6 287 aa9.18□□□□□ -0.94
SMPD4-209ENST00000439886 IGKV1-17P01599 117 aa9.18□□□□□ -0.94
SMPD4-209ENST00000439886 SPANXN1Q5VSR9 72 aa9.18□□□□□ -0.94
SMPD4-209ENST00000439886 C22orf34Q6ZV56 151 aa9.18□□□□□ -0.94
SMPD4-209ENST00000439886 ATMQ13315 3056 aa9.17□□□□□ -0.94
SMPD4-209ENST00000439886 C3orf36Q3SXR2 165 aa9.17□□□□□ -0.94
SMPD4-209ENST00000439886 PRRG2O14669 202 aa9.17□□□□□ -0.94
SMPD4-209ENST00000439886 HOXA3O43365 443 aaPredicted RBP9.17□□□□□ -0.94
SMPD4-209ENST00000439886 SHANK2-AS3Q9BTD1 123 aa9.17□□□□□ -0.94
SMPD4-209ENST00000439886 TMEM126AQ9H061 195 aa9.17□□□□□ -0.94
SMPD4-209ENST00000439886 SMG1Q96Q15 3661 aaKnown RBP9.17□□□□□ -0.94
SMPD4-209ENST00000439886 RHODO00212 210 aa9.16□□□□□ -0.94
SMPD4-209ENST00000439886 ZNF80P51504 273 aaPredicted RBP9.16□□□□□ -0.94
SMPD4-209ENST00000439886 NFE4Q86UQ8 179 aa9.16□□□□□ -0.94
SMPD4-209ENST00000439886 TRAV8-2A0A0B4J237 113 aa9.16□□□□□ -0.94
SMPD4-209ENST00000439886 LINC01549A6NIU2 74 aa9.16□□□□□ -0.94
SMPD4-209ENST00000439886 AJUBAQ96IF1 538 aa9.16□□□□□ -0.94
SMPD4-209ENST00000439886 DNAJC30Q96LL9 226 aa9.16□□□□□ -0.94
SMPD4-209ENST00000439886 TRAV4A0A0B4J268 109 aa9.15□□□□□ -0.94
SMPD4-209ENST00000439886 RNF182Q8N6D2 247 aa9.15□□□□□ -0.94
SMPD4-209ENST00000439886 NOTCH3Q9UM47 2321 aa9.15□□□□□ -0.94
SMPD4-209ENST00000439886 MGPP08493 103 aa9.15□□□□□ -0.94
SMPD4-209ENST00000439886 SPRY4Q9C004 299 aa9.15□□□□□ -0.94
SMPD4-209ENST00000439886 IGKV3-7A0A075B6H7 116 aa9.15□□□□□ -0.95
SMPD4-209ENST00000439886 C9JAW5 83 aa9.15□□□□□ -0.95
SMPD4-209ENST00000439886 IGHV1-8P0DP01 117 aa9.15□□□□□ -0.95
SMPD4-209ENST00000439886 C10orf126Q8N4M7 172 aa9.15□□□□□ -0.95
SMPD4-209ENST00000439886 ZNF491Q8N8L2 437 aa9.15□□□□□ -0.95
SMPD4-209ENST00000439886 PRSS33Q8NF86 280 aa9.15□□□□□ -0.95
SMPD4-209ENST00000439886 PPDPFLQ8WWR9 84 aa9.15□□□□□ -0.95
SMPD4-209ENST00000439886 PRR25Q96S07 402 aa9.15□□□□□ -0.95
SMPD4-209ENST00000439886 NXT2Q9NPJ8 142 aaKnown RBP9.15□□□□□ -0.95
SMPD4-209ENST00000439886 C17orf100A8MU93 164 aa9.14□□□□□ -0.95
SMPD4-209ENST00000439886 TMEM262E9PQX1 116 aa9.14□□□□□ -0.95
SMPD4-209ENST00000439886 M0R381 172 aa9.14□□□□□ -0.95
SMPD4-209ENST00000439886 HLA-DRB4P13762 266 aa9.14□□□□□ -0.95
SMPD4-209ENST00000439886 RAXQ9Y2V3 346 aa9.14□□□□□ -0.95
SMPD4-209ENST00000439886 HLA-DRB4X5D2U9 266 aa9.14□□□□□ -0.95
SMPD4-209ENST00000439886 WI2-2373I1.2A0A1W2PRP0 233 aa9.14□□□□□ -0.95
SMPD4-209ENST00000439886 ATP5LO75964 103 aa9.14□□□□□ -0.95
SMPD4-209ENST00000439886 SCGB3A1Q96QR1 104 aa9.14□□□□□ -0.95
SMPD4-209ENST00000439886 RAI1Q7Z5J4 1906 aaPredicted RBP9.14□□□□□ -0.95
SMPD4-209ENST00000439886 BDP1A6H8Y1 2624 aa9.14□□□□□ -0.95
SMPD4-209ENST00000439886 IGHV1-3A0A0C4DH29 117 aa9.13□□□□□ -0.95
SMPD4-209ENST00000439886 E9PLD3 99 aa9.13□□□□□ -0.95
SMPD4-209ENST00000439886 WIPF1O43516 503 aa9.13□□□□□ -0.95
SMPD4-209ENST00000439886 S100A4P26447 101 aaKnown RBP9.13□□□□□ -0.95
SMPD4-209ENST00000439886 DTX2Q86UW9 622 aa9.13□□□□□ -0.95
SMPD4-209ENST00000439886 ZNF815PA8K554 130 aa9.13□□□□□ -0.95
SMPD4-209ENST00000439886 TRGV3P03979 118 aa9.13□□□□□ -0.95
SMPD4-209ENST00000439886 ZNF688P0C7X2 276 aa9.13□□□□□ -0.95
SMPD4-209ENST00000439886 RRN3P1Q2M238 152 aa9.13□□□□□ -0.95
SMPD4-209ENST00000439886 C1orf43Q9BWL3 253 aa9.13□□□□□ -0.95
SMPD4-209ENST00000439886 CTSZQ9UBR2 303 aa9.13□□□□□ -0.95
SMPD4-209ENST00000439886 C16orf97H3BN30 126 aa9.13□□□□□ -0.95
SMPD4-209ENST00000439886 TIMM23O14925 209 aa9.13□□□□□ -0.95
SMPD4-209ENST00000439886 DKK4Q9UBT3 224 aa9.13□□□□□ -0.95
SMPD4-209ENST00000439886 HHLA3Q9XRX5 114 aa9.13□□□□□ -0.95
SMPD4-209ENST00000439886 Q1RN00 199 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms