RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 CLEC19AQ6UXS0 136 aa7.07□□□□□ -1.28
COPB1-202ENST00000439561 MAPKAPK5-AS1Q8N8E1 139 aa7.07□□□□□ -1.28
COPB1-202ENST00000439561 C16orf92Q96LL3 132 aa7.07□□□□□ -1.28
COPB1-202ENST00000439561 ATP6V0BQ99437 205 aa7.07□□□□□ -1.28
COPB1-202ENST00000439561 NOTCH3Q9UM47 2321 aa7.07□□□□□ -1.28
COPB1-202ENST00000439561 DLX6P56179 175 aa7.07□□□□□ -1.28
COPB1-202ENST00000439561 NDPQ00604 133 aa7.07□□□□□ -1.28
COPB1-202ENST00000439561 PDE6HQ13956 83 aa7.07□□□□□ -1.28
COPB1-202ENST00000439561 CHTOPQ9Y3Y2 248 aaKnown RBP7.07□□□□□ -1.28
COPB1-202ENST00000439561 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.07□□□□□ -1.283e-7■■■■□ 25.4
COPB1-202ENST00000439561 F8W1H4 67 aa7.06□□□□□ -1.28
COPB1-202ENST00000439561 INSL3P51460 131 aa7.06□□□□□ -1.28
COPB1-202ENST00000439561 SRSF1Q07955 248 aaKnown RBP eCLIP7.06□□□□□ -1.283e-14■■■□□ 17.4
COPB1-202ENST00000439561 FOXI2Q6ZQN5 318 aa7.06□□□□□ -1.28
COPB1-202ENST00000439561 SYT8Q8NBV8 401 aa7.06□□□□□ -1.28
COPB1-202ENST00000439561 GLMPQ8WWB7 406 aa7.06□□□□□ -1.28
COPB1-202ENST00000439561 CFHR4Q92496 578 aa7.06□□□□□ -1.28
COPB1-202ENST00000439561 SPAG8Q99932 426 aaPredicted RBP7.06□□□□□ -1.28
COPB1-202ENST00000439561 TLN1Q9Y490 2541 aaKnown RBP7.06□□□□□ -1.28
COPB1-202ENST00000439561 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.06□□□□□ -1.28
COPB1-202ENST00000439561 C5orf64Q2M2E5 130 aa7.06□□□□□ -1.28
COPB1-202ENST00000439561 TNFRSF14Q92956 283 aa7.06□□□□□ -1.28
COPB1-202ENST00000439561 PHLDA3Q9Y5J5 127 aa7.06□□□□□ -1.28
COPB1-202ENST00000439561 TMEM238LA0A1B0GVL6 79 aa7.06□□□□□ -1.28
COPB1-202ENST00000439561 LINC01549A6NIU2 74 aa7.06□□□□□ -1.28
COPB1-202ENST00000439561 A6NJY4 79 aa7.06□□□□□ -1.28
COPB1-202ENST00000439561 C15orf32Q32M92 178 aa7.06□□□□□ -1.28
COPB1-202ENST00000439561 SMPXQ9UHP9 88 aa7.06□□□□□ -1.28
COPB1-202ENST00000439561 DMXL2Q8TDJ6 3036 aa7.05□□□□□ -1.28
COPB1-202ENST00000439561 BDP1A6H8Y1 2624 aa7.05□□□□□ -1.28
COPB1-202ENST00000439561 MRGPRG-AS1Q2M3A8 158 aa7.05□□□□□ -1.28
COPB1-202ENST00000439561 Q8N8P6 123 aa7.05□□□□□ -1.28
COPB1-202ENST00000439561 CLUHP3Q96NS8 147 aa7.05□□□□□ -1.28
COPB1-202ENST00000439561 C20orf78Q9BR46 151 aa7.05□□□□□ -1.28
COPB1-202ENST00000439561 LINC00527Q9UJ94 153 aa7.05□□□□□ -1.28
COPB1-202ENST00000439561 ADGRG4Q8IZF6 3080 aa7.05□□□□□ -1.28
COPB1-202ENST00000439561 OTOGLQ3ZCN5 2332 aa7.05□□□□□ -1.28
COPB1-202ENST00000439561 WI2-2373I1.2A0A1W2PRP0 233 aa7.05□□□□□ -1.28
COPB1-202ENST00000439561 IGLV1-47P01700 117 aa7.05□□□□□ -1.28
COPB1-202ENST00000439561 SPINK8P0C7L1 97 aa7.05□□□□□ -1.28
COPB1-202ENST00000439561 TMEM170BQ5T4T1 132 aa7.05□□□□□ -1.28
COPB1-202ENST00000439561 C14orf178Q8N769 122 aaPredicted RBP7.05□□□□□ -1.28
COPB1-202ENST00000439561 HLA-DRB4P13762 266 aa7.05□□□□□ -1.28
COPB1-202ENST00000439561 BEX4Q9NWD9 120 aaPredicted RBP7.05□□□□□ -1.28
COPB1-202ENST00000439561 HLA-DRB4X5D2U9 266 aa7.05□□□□□ -1.28
COPB1-202ENST00000439561 CEACAM4O75871 244 aa7.04□□□□□ -1.28
COPB1-202ENST00000439561 PTH2Q96A98 100 aa7.04□□□□□ -1.28
COPB1-202ENST00000439561 GEMIN7Q9H840 131 aaKnown RBP7.04□□□□□ -1.28
COPB1-202ENST00000439561 SPANXB1Q9NS25 103 aaPredicted RBP7.04□□□□□ -1.28
COPB1-202ENST00000439561 H7C1H1 209 aa7.04□□□□□ -1.28
COPB1-202ENST00000439561 THBDP07204 575 aa7.04□□□□□ -1.28
COPB1-202ENST00000439561 PLNP26678 52 aa7.04□□□□□ -1.28
COPB1-202ENST00000439561 RRN3P1Q2M238 152 aa7.04□□□□□ -1.28
COPB1-202ENST00000439561 PSMG4Q5JS54 123 aa7.04□□□□□ -1.28
COPB1-202ENST00000439561 METTL26Q96S19 204 aa7.04□□□□□ -1.28
COPB1-202ENST00000439561 B9A039 149 aa7.03□□□□□ -1.28
COPB1-202ENST00000439561 SLC25A16P16260 332 aa7.03□□□□□ -1.28
COPB1-202ENST00000439561 C3orf36Q3SXR2 165 aa7.03□□□□□ -1.28
COPB1-202ENST00000439561 RNF185Q96GF1 192 aa7.03□□□□□ -1.28
COPB1-202ENST00000439561 HHLA3Q9XRX5 114 aa7.03□□□□□ -1.28
COPB1-202ENST00000439561 U3KQK5 164 aa7.03□□□□□ -1.28
COPB1-202ENST00000439561 IGHV3-64A0A075B6Q5 118 aa7.03□□□□□ -1.28
COPB1-202ENST00000439561 TRBV6-1A0A0K0K1D8 114 aa7.03□□□□□ -1.28
COPB1-202ENST00000439561 MYMXA0A1B0GTQ4 84 aa7.03□□□□□ -1.28
COPB1-202ENST00000439561 CRYGBP07316 175 aa7.03□□□□□ -1.28
COPB1-202ENST00000439561 ZNF672Q499Z4 452 aaPredicted RBP7.03□□□□□ -1.28
COPB1-202ENST00000439561 CCDC144NLQ6NUI1 221 aa7.03□□□□□ -1.28
COPB1-202ENST00000439561 DLX4Q92988 240 aaPredicted RBP7.03□□□□□ -1.28
COPB1-202ENST00000439561 PRADC1Q9BSG0 188 aa7.03□□□□□ -1.28
COPB1-202ENST00000439561 HIGD1BQ9P298 99 aa7.03□□□□□ -1.28
COPB1-202ENST00000439561 HERVK_113P61574 105 aa7.03□□□□□ -1.28
COPB1-202ENST00000439561 FAM74A4Q5TZK3 123 aa7.03□□□□□ -1.28
COPB1-202ENST00000439561 IGFL2Q6UWQ7 119 aa7.03□□□□□ -1.28
COPB1-202ENST00000439561 Q6ZS92 163 aa7.03□□□□□ -1.28
COPB1-202ENST00000439561 C8orf31Q8N9H6 132 aa7.03□□□□□ -1.28
COPB1-202ENST00000439561 KLHL30-AS1Q8NEE0 82 aa7.03□□□□□ -1.28
COPB1-202ENST00000439561 AGPAT4-IT1Q9H0P7 198 aa7.03□□□□□ -1.28
COPB1-202ENST00000439561 SPG11Q96JI7 2443 aa7.03□□□□□ -1.28
COPB1-202ENST00000439561 TACC2O95359 2948 aa7.02□□□□□ -1.28
COPB1-202ENST00000439561 IGHV3OR16-10A0A075B7F0 116 aa7.02□□□□□ -1.29
COPB1-202ENST00000439561 TRAV26-1A0A087WT03 109 aa7.02□□□□□ -1.29
COPB1-202ENST00000439561 A0A087WX48 190 aa7.02□□□□□ -1.29
COPB1-202ENST00000439561 E9PLD3 99 aa7.02□□□□□ -1.29
COPB1-202ENST00000439561 F8VRH5 84 aa7.02□□□□□ -1.29
COPB1-202ENST00000439561 C16orf54Q6UWD8 224 aa7.02□□□□□ -1.29
COPB1-202ENST00000439561 Q6ZQT7 251 aa7.02□□□□□ -1.29
COPB1-202ENST00000439561 FANCD2OSQ96PS1 177 aa7.02□□□□□ -1.29
COPB1-202ENST00000439561 CFAP47Q6ZTR5 3102 aa7.02□□□□□ -1.29
COPB1-202ENST00000439561 KALRNO60229 2985 aa7.02□□□□□ -1.29
COPB1-202ENST00000439561 IGLC6P0CF74 106 aa7.02□□□□□ -1.29
COPB1-202ENST00000439561 HOXB4P17483 251 aaPredicted RBP7.02□□□□□ -1.29
COPB1-202ENST00000439561 PRTN3P24158 256 aa7.02□□□□□ -1.29
COPB1-202ENST00000439561 PRR30Q53SZ7 412 aaPredicted RBP7.02□□□□□ -1.29
COPB1-202ENST00000439561 KAAG1Q9UBP8 84 aa7.02□□□□□ -1.29
COPB1-202ENST00000439561 DEFB1P60022 68 aa7.02□□□□□ -1.29
COPB1-202ENST00000439561 PLA2G2CQ5R387 149 aa7.02□□□□□ -1.29
COPB1-202ENST00000439561 LYRM7Q5U5X0 104 aa7.02□□□□□ -1.29
COPB1-202ENST00000439561 RPL39LQ96EH5 51 aaKnown RBP7.02□□□□□ -1.29
COPB1-202ENST00000439561 RAX2Q96IS3 184 aa7.02□□□□□ -1.29
COPB1-202ENST00000439561 SRSF8Q9BRL6 282 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms