RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 SEC11CQ9BY50 192 aa9.29□□□□□ -0.92
SCLT1-202ENST00000439369 NAT8Q9UHE5 227 aa9.29□□□□□ -0.92
SCLT1-202ENST00000439369 M0R2Z0 102 aa9.28□□□□□ -0.92
SCLT1-202ENST00000439369 CRXO43186 299 aaPredicted RBP9.28□□□□□ -0.92
SCLT1-202ENST00000439369 CA1P00915 261 aaPredicted RBP9.28□□□□□ -0.92
SCLT1-202ENST00000439369 IGLV2-8P01709 118 aa9.28□□□□□ -0.92
SCLT1-202ENST00000439369 GIG44P09565 113 aaPredicted RBP9.28□□□□□ -0.92
SCLT1-202ENST00000439369 FRMD6-AS1P0C7T7 363 aa9.28□□□□□ -0.92
SCLT1-202ENST00000439369 PNRC1Q12796 327 aaPredicted RBP9.28□□□□□ -0.92
SCLT1-202ENST00000439369 GFI1BQ5VTD9 330 aa9.28□□□□□ -0.92
SCLT1-202ENST00000439369 Q6ZWC4 215 aa9.28□□□□□ -0.92
SCLT1-202ENST00000439369 TRAV21A0A0B4J279 112 aa9.27□□□□□ -0.93
SCLT1-202ENST00000439369 FABP5P3A8MUU1 101 aa9.27□□□□□ -0.93
SCLT1-202ENST00000439369 KRBOX1C9JBD0 128 aa9.27□□□□□ -0.93
SCLT1-202ENST00000439369 GCGP01275 180 aa9.27□□□□□ -0.93
SCLT1-202ENST00000439369 PFN1P07737 140 aaKnown RBP9.27□□□□□ -0.93
SCLT1-202ENST00000439369 C10orf91Q5T1B1 145 aa9.27□□□□□ -0.93
SCLT1-202ENST00000439369 FAM162BQ5T6X4 162 aa9.27□□□□□ -0.93
SCLT1-202ENST00000439369 LINC01551Q86U37 167 aa9.27□□□□□ -0.93
SCLT1-202ENST00000439369 OCC1Q8TAD7 63 aa9.27□□□□□ -0.93
SCLT1-202ENST00000439369 ZC2HC1AQ96GY0 325 aa9.27□□□□□ -0.93
SCLT1-202ENST00000439369 C8orf49Q96NF6 230 aa9.27□□□□□ -0.93
SCLT1-202ENST00000439369 LINC00467Q9BRT7 94 aa9.27□□□□□ -0.93
SCLT1-202ENST00000439369 TP53TG1Q9Y2A0 90 aa9.27□□□□□ -0.93
SCLT1-202ENST00000439369 GOLT1BQ9Y3E0 138 aa9.27□□□□□ -0.93
SCLT1-202ENST00000439369 F8W036 122 aa9.26□□□□□ -0.93
SCLT1-202ENST00000439369 H7BYZ3 331 aa9.26□□□□□ -0.93
SCLT1-202ENST00000439369 ZNF324O75467 553 aaPredicted RBP9.26□□□□□ -0.93
SCLT1-202ENST00000439369 PRB2P02812 416 aaPredicted RBP9.26□□□□□ -0.93
SCLT1-202ENST00000439369 RNASE4P34096 147 aaKnown RBP9.26□□□□□ -0.93
SCLT1-202ENST00000439369 PRR9Q5T870 116 aa9.26□□□□□ -0.93
SCLT1-202ENST00000439369 CSNK1G2-AS1Q8NCQ2 148 aa9.26□□□□□ -0.93
SCLT1-202ENST00000439369 SDF2L1Q9HCN8 221 aa9.26□□□□□ -0.93
SCLT1-202ENST00000439369 XCL2Q9UBD3 114 aa9.26□□□□□ -0.93
SCLT1-202ENST00000439369 CARHSP1Q9Y2V2 147 aaKnown RBP9.26□□□□□ -0.93
SCLT1-202ENST00000439369 MGST1P10620 155 aaKnown RBP9.25□□□□□ -0.93
SCLT1-202ENST00000439369 FXYD7P58549 80 aa9.25□□□□□ -0.93
SCLT1-202ENST00000439369 BTN1A1Q13410 526 aa9.25□□□□□ -0.93
SCLT1-202ENST00000439369 FAM231DQ6ZW35 169 aa9.25□□□□□ -0.93
SCLT1-202ENST00000439369 SLC7A5P1Q8MH63 180 aa9.25□□□□□ -0.93
SCLT1-202ENST00000439369 PYGO2Q9BRQ0 406 aa9.25□□□□□ -0.93
SCLT1-202ENST00000439369 NBEAL1Q6ZS30 2694 aa9.24□□□□□ -0.93
SCLT1-202ENST00000439369 AGRNO00468 2067 aa9.24□□□□□ -0.93
SCLT1-202ENST00000439369 TRAV12-2A0A075B6T6 113 aa9.24□□□□□ -0.93
SCLT1-202ENST00000439369 TRAV12-3A0A0B4J271 114 aa9.24□□□□□ -0.93
SCLT1-202ENST00000439369 C19orf71A6NCJ1 209 aa9.24□□□□□ -0.93
SCLT1-202ENST00000439369 K7EN84 100 aa9.24□□□□□ -0.93
SCLT1-202ENST00000439369 SH2D1AO60880 128 aa9.24□□□□□ -0.93
SCLT1-202ENST00000439369 ADCYAP1P18509 176 aa9.24□□□□□ -0.93
SCLT1-202ENST00000439369 CRIP1P50238 77 aa9.24□□□□□ -0.93
SCLT1-202ENST00000439369 ZNF80P51504 273 aaPredicted RBP9.24□□□□□ -0.93
SCLT1-202ENST00000439369 RPL23P62829 140 aaKnown RBP9.24□□□□□ -0.93
SCLT1-202ENST00000439369 KIR3DS1Q14943 382 aa9.24□□□□□ -0.93
SCLT1-202ENST00000439369 TDRG1Q3Y452 100 aa9.24□□□□□ -0.93
SCLT1-202ENST00000439369 DEFB121Q5J5C9 76 aa9.24□□□□□ -0.93
SCLT1-202ENST00000439369 ZNF705AQ6ZN79 300 aaPredicted RBP9.24□□□□□ -0.93
SCLT1-202ENST00000439369 NHLRC2Q8NBF2 726 aa9.24□□□□□ -0.93
SCLT1-202ENST00000439369 MRAPQ8TCY5 172 aa9.24□□□□□ -0.93
SCLT1-202ENST00000439369 KCNS1Q96KK3 526 aa9.24□□□□□ -0.93
SCLT1-202ENST00000439369 NEU1Q99519 415 aa9.24□□□□□ -0.93
SCLT1-202ENST00000439369 PGPEP1LA6NFU8 196 aa9.23□□□□□ -0.93
SCLT1-202ENST00000439369 B4DEV8 164 aa9.23□□□□□ -0.93
SCLT1-202ENST00000439369 J3KRW8 73 aa9.23□□□□□ -0.93
SCLT1-202ENST00000439369 C1orf158Q8N1D5 194 aa9.23□□□□□ -0.93
SCLT1-202ENST00000439369 ISOC2Q96AB3 205 aa9.23□□□□□ -0.93
SCLT1-202ENST00000439369 RNF183Q96D59 192 aa9.23□□□□□ -0.93
SCLT1-202ENST00000439369 DAZAP1Q96EP5 407 aaKnown RBP9.23□□□□□ -0.93
SCLT1-202ENST00000439369 RCHY1Q96PM5 261 aa9.23□□□□□ -0.93
SCLT1-202ENST00000439369 OSTCQ9NRP0 149 aa9.23□□□□□ -0.93
SCLT1-202ENST00000439369 NOTCH1P46531 2555 aa9.23□□□□□ -0.93
SCLT1-202ENST00000439369 IGHV1OR15-1A0A075B7D0 117 aa9.22□□□□□ -0.93
SCLT1-202ENST00000439369 SMIM9A6NGZ8 99 aa9.22□□□□□ -0.93
SCLT1-202ENST00000439369 CXCL1P09341 107 aa9.22□□□□□ -0.93
SCLT1-202ENST00000439369 RBMY1A1P0DJD3 496 aaKnown RBP9.22□□□□□ -0.93
SCLT1-202ENST00000439369 RBMY1CP0DJD4 496 aa9.22□□□□□ -0.93
SCLT1-202ENST00000439369 RBMY1FQ15415 496 aaKnown RBP9.22□□□□□ -0.93
SCLT1-202ENST00000439369 ADIRFQ15847 76 aa9.22□□□□□ -0.93
SCLT1-202ENST00000439369 LINC01559Q495D7 138 aa9.22□□□□□ -0.93
SCLT1-202ENST00000439369 PRR27Q6MZM9 219 aa9.22□□□□□ -0.93
SCLT1-202ENST00000439369 FAM159AQ6UWV7 190 aa9.22□□□□□ -0.93
SCLT1-202ENST00000439369 B9D2Q9BPU9 175 aa9.22□□□□□ -0.93
SCLT1-202ENST00000439369 TMEM208Q9BTX3 173 aa9.22□□□□□ -0.93
SCLT1-202ENST00000439369 KRTAP3-3Q9BYR6 98 aa9.22□□□□□ -0.93
SCLT1-202ENST00000439369 KRTAP3-2Q9BYR7 98 aa9.22□□□□□ -0.93
SCLT1-202ENST00000439369 DNHD1Q96M86 4753 aa9.22□□□□□ -0.93
SCLT1-202ENST00000439369 SPRY2O43597 315 aa9.21□□□□□ -0.94
SCLT1-202ENST00000439369 P01737 135 aa9.21□□□□□ -0.94
SCLT1-202ENST00000439369 RPS20P60866 119 aaKnown RBP9.21□□□□□ -0.94
SCLT1-202ENST00000439369 DEFA6Q01524 100 aa9.21□□□□□ -0.94
SCLT1-202ENST00000439369 ANXA2RQ3ZCQ2 193 aa9.21□□□□□ -0.94
SCLT1-202ENST00000439369 CT83Q5H943 113 aa9.21□□□□□ -0.94
SCLT1-202ENST00000439369 IBA57Q5T440 356 aaKnown RBP9.21□□□□□ -0.94
SCLT1-202ENST00000439369 C15orf54Q8N8G6 183 aa9.21□□□□□ -0.94
SCLT1-202ENST00000439369 LINC01587Q99440 93 aa9.21□□□□□ -0.94
SCLT1-202ENST00000439369 TM2D3Q9BRN9 247 aa9.21□□□□□ -0.94
SCLT1-202ENST00000439369 TRGV11A0A075B6L2 103 aa9.2□□□□□ -0.94
SCLT1-202ENST00000439369 XKRY2A2RUG3 117 aa9.2□□□□□ -0.94
SCLT1-202ENST00000439369 PPP1R2P9O14990 202 aa9.2□□□□□ -0.94
SCLT1-202ENST00000439369 ORM1P02763 201 aa9.2□□□□□ -0.94
SCLT1-202ENST00000439369 ERVFC1-1P60608 527 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms