RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 HLA-DRB4X5D2U9 266 aa10.4□□□□□ -0.74
ACTN1-204ENST00000438964 VPS13CQ709C8 3753 aa10.4□□□□□ -0.74
ACTN1-204ENST00000438964 TIMM23O14925 209 aa10.4□□□□□ -0.74
ACTN1-204ENST00000438964 SPINK8P0C7L1 97 aa10.4□□□□□ -0.74
ACTN1-204ENST00000438964 CFHR4Q92496 578 aa10.4□□□□□ -0.74
ACTN1-204ENST00000438964 MRPL16Q9NX20 251 aaKnown RBP10.4□□□□□ -0.74
ACTN1-204ENST00000438964 TRAV17A0A0B4J275 112 aa10.39□□□□□ -0.75
ACTN1-204ENST00000438964 H3BVH4 76 aa10.39□□□□□ -0.75
ACTN1-204ENST00000438964 K7EM74 188 aa10.39□□□□□ -0.75
ACTN1-204ENST00000438964 CDX4O14627 284 aaPredicted RBP10.39□□□□□ -0.75
ACTN1-204ENST00000438964 GATD1Q8NB37 220 aa10.39□□□□□ -0.75
ACTN1-204ENST00000438964 TM2D2Q9BX73 214 aa10.39□□□□□ -0.75
ACTN1-204ENST00000438964 ONECUT1Q9UBC0 465 aa10.39□□□□□ -0.75
ACTN1-204ENST00000438964 SMPXQ9UHP9 88 aa10.39□□□□□ -0.75
ACTN1-204ENST00000438964 RRN3P1Q2M238 152 aa10.39□□□□□ -0.75
ACTN1-204ENST00000438964 TMEM155Q4W5P6 130 aa10.39□□□□□ -0.75
ACTN1-204ENST00000438964 KLHL30-AS1Q8NEE0 82 aa10.39□□□□□ -0.75
ACTN1-204ENST00000438964 VKORC1Q9BQB6 163 aa10.39□□□□□ -0.75
ACTN1-204ENST00000438964 SPATA25Q9BR10 227 aa10.39□□□□□ -0.75
ACTN1-204ENST00000438964 DYNLRB1Q9NP97 96 aa10.39□□□□□ -0.75
ACTN1-204ENST00000438964 C11orf21Q9P2W6 132 aa10.39□□□□□ -0.75
ACTN1-204ENST00000438964 PRO0461Q9UI25 63 aa10.39□□□□□ -0.75
ACTN1-204ENST00000438964 LINC01549A6NIU2 74 aa10.38□□□□□ -0.75
ACTN1-204ENST00000438964 CRYGBP07316 175 aa10.38□□□□□ -0.75
ACTN1-204ENST00000438964 DLX6P56179 175 aa10.38□□□□□ -0.75
ACTN1-204ENST00000438964 KLRD1Q13241 179 aa10.38□□□□□ -0.75
ACTN1-204ENST00000438964 KIR2DL4Q99706 377 aa10.38□□□□□ -0.75
ACTN1-204ENST00000438964 SMCPP49901 116 aaPredicted RBP10.38□□□□□ -0.75
ACTN1-204ENST00000438964 ZMAT4Q9H898 229 aa10.38□□□□□ -0.75
ACTN1-204ENST00000438964 SS18L2Q9UHA2 77 aa10.38□□□□□ -0.75
ACTN1-204ENST00000438964 BUB1B-PAK6H3BSN5 160 aa10.37□□□□□ -0.75
ACTN1-204ENST00000438964 XGP55808 180 aa10.37□□□□□ -0.75
ACTN1-204ENST00000438964 MYOZ3Q8TDC0 251 aa10.37□□□□□ -0.75
ACTN1-204ENST00000438964 HIGD1BQ9P298 99 aa10.37□□□□□ -0.75
ACTN1-204ENST00000438964 IGHG4P01861 327 aa10.37□□□□□ -0.75
ACTN1-204ENST00000438964 IGLC6P0CF74 106 aa10.37□□□□□ -0.75
ACTN1-204ENST00000438964 DEFB1P60022 68 aa10.37□□□□□ -0.75
ACTN1-204ENST00000438964 MORN3Q6PF18 240 aaPredicted RBP10.37□□□□□ -0.75
ACTN1-204ENST00000438964 SMAD5-AS1Q9Y6J3 95 aa10.37□□□□□ -0.75
ACTN1-204ENST00000438964 PRSS29PA6NIE9 313 aa10.36□□□□□ -0.75
ACTN1-204ENST00000438964 NCBP2LA6PVI3 153 aaKnown RBP10.36□□□□□ -0.75
ACTN1-204ENST00000438964 PLEKHB2Q96CS7 222 aa10.36□□□□□ -0.75
ACTN1-204ENST00000438964 ATRXP46100 2492 aa10.36□□□□□ -0.75
ACTN1-204ENST00000438964 MBD3L4A6NDZ8 208 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-204ENST00000438964 MBD3L3A6NE82 208 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-204ENST00000438964 MBD3L5A6NJ08 208 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-204ENST00000438964 SCGB1D4Q6XE38 83 aa10.36□□□□□ -0.75
ACTN1-204ENST00000438964 MBD3L2Q8NHZ7 208 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-204ENST00000438964 RNF183Q96D59 192 aa10.36□□□□□ -0.75
ACTN1-204ENST00000438964 CDIP1Q9H305 208 aa10.36□□□□□ -0.75
ACTN1-204ENST00000438964 FOXI1Q12951 378 aa10.36□□□□□ -0.75
ACTN1-204ENST00000438964 ZNF502Q8TBZ5 544 aa10.36□□□□□ -0.75
ACTN1-204ENST00000438964 SORL1Q92673 2214 aa10.35□□□□□ -0.75
ACTN1-204ENST00000438964 HRNRQ86YZ3 2850 aaPredicted RBP10.35□□□□□ -0.75
ACTN1-204ENST00000438964 IGKV3D-20A0A0C4DH25 116 aa10.35□□□□□ -0.75
ACTN1-204ENST00000438964 C8orf86Q6ZUL3 223 aa10.35□□□□□ -0.75
ACTN1-204ENST00000438964 OTOGLQ3ZCN5 2332 aa10.35□□□□□ -0.75
ACTN1-204ENST00000438964 NDPQ00604 133 aa10.35□□□□□ -0.75
ACTN1-204ENST00000438964 SRSF9Q13242 221 aaKnown RBP eCLIP10.35□□□□□ -0.75
ACTN1-204ENST00000438964 H7C2G1 150 aa10.34□□□□□ -0.75
ACTN1-204ENST00000438964 HOXA3O43365 443 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-204ENST00000438964 LINC00311Q8N616 119 aa10.34□□□□□ -0.75
ACTN1-204ENST00000438964 NXT2Q9NPJ8 142 aaKnown RBP10.34□□□□□ -0.75
ACTN1-204ENST00000438964 CSMD2Q7Z408 3487 aa10.34□□□□□ -0.75
ACTN1-204ENST00000438964 OR11H12B2RN74 326 aa10.34□□□□□ -0.75
ACTN1-204ENST00000438964 IGLV1-47P01700 117 aa10.34□□□□□ -0.75
ACTN1-204ENST00000438964 TMEM30BQ3MIR4 351 aa10.34□□□□□ -0.75
ACTN1-204ENST00000438964 PVRIGQ6DKI7 326 aa10.34□□□□□ -0.75
ACTN1-204ENST00000438964 OR11H1Q8NG94 326 aa10.34□□□□□ -0.75
ACTN1-204ENST00000438964 OR11H2Q8NH07 326 aa10.34□□□□□ -0.75
ACTN1-204ENST00000438964 MRAP2Q96G30 205 aa10.34□□□□□ -0.75
ACTN1-204ENST00000438964 HIF1ANQ9NWT6 349 aa10.34□□□□□ -0.75
ACTN1-204ENST00000438964 M0R381 172 aa10.33□□□□□ -0.75
ACTN1-204ENST00000438964 IGF1P05019 195 aa10.33□□□□□ -0.75
ACTN1-204ENST00000438964 TRBV7-3A0A075B6L6 115 aa10.33□□□□□ -0.76
ACTN1-204ENST00000438964 TRBV6-1A0A0K0K1D8 114 aa10.33□□□□□ -0.76
ACTN1-204ENST00000438964 FABP5P3A8MUU1 101 aa10.33□□□□□ -0.76
ACTN1-204ENST00000438964 F8W735 103 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-204ENST00000438964 SCGB1A1P11684 91 aa10.33□□□□□ -0.76
ACTN1-204ENST00000438964 LAGE3Q14657 143 aa10.33□□□□□ -0.76
ACTN1-204ENST00000438964 SPANXN1Q5VSR9 72 aa10.33□□□□□ -0.76
ACTN1-204ENST00000438964 RPL39LQ96EH5 51 aaKnown RBP10.33□□□□□ -0.76
ACTN1-204ENST00000438964 LYPD1Q8N2G4 141 aa10.33□□□□□ -0.76
ACTN1-204ENST00000438964 Q8N8P6 123 aa10.33□□□□□ -0.76
ACTN1-204ENST00000438964 FANCD2OSQ96PS1 177 aa10.33□□□□□ -0.76
ACTN1-204ENST00000438964 FAM90A27PA6NNH2 459 aa10.32□□□□□ -0.76
ACTN1-204ENST00000438964 ZNF815PA8K554 130 aa10.32□□□□□ -0.76
ACTN1-204ENST00000438964 CEACAM4O75871 244 aa10.32□□□□□ -0.76
ACTN1-204ENST00000438964 LGALS1P09382 135 aaKnown RBP10.32□□□□□ -0.76
ACTN1-204ENST00000438964 SLC25A16P16260 332 aa10.32□□□□□ -0.76
ACTN1-204ENST00000438964 CREBBPQ92793 2442 aa10.32□□□□□ -0.76
ACTN1-204ENST00000438964 CRYBG3Q68DQ2 2970 aa10.32□□□□□ -0.76
ACTN1-204ENST00000438964 IGLV2-18A0A075B6J9 118 aa10.32□□□□□ -0.76
ACTN1-204ENST00000438964 A0A087WX48 190 aa10.32□□□□□ -0.76
ACTN1-204ENST00000438964 ATP5LO75964 103 aa10.32□□□□□ -0.76
ACTN1-204ENST00000438964 RNASE6Q93091 150 aaKnown RBP10.32□□□□□ -0.76
ACTN1-204ENST00000438964 TMEM78Q5T7P6 136 aa10.31□□□□□ -0.76
ACTN1-204ENST00000438964 PRADC1Q9BSG0 188 aa10.31□□□□□ -0.76
ACTN1-204ENST00000438964 C21orf62Q9NYP8 219 aa10.31□□□□□ -0.76
ACTN1-204ENST00000438964 RAXQ9Y2V3 346 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 246.2 ms