RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 XAGE1AQ9HD64 81 aa2.03□□□□□ -2.08
LSM1P1-201ENST00000438629 TXNL4BQ9NX01 149 aaKnown RBP2.03□□□□□ -2.08
LSM1P1-201ENST00000438629 DNAJC15Q9Y5T4 150 aa2.03□□□□□ -2.08
LSM1P1-201ENST00000438629 SPCS1Q9Y6A9 102 aa2.03□□□□□ -2.08
LSM1P1-201ENST00000438629 KIDINS220Q9ULH0 1771 aa2.03□□□□□ -2.09
LSM1P1-201ENST00000438629 TNRC6AQ8NDV7 1962 aaKnown RBP2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 FAM24AA6NFZ4 105 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 A8MUU9 505 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 C9JCJ5 164 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 H3BRM9 83 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 YPEL1O60688 119 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 HBDP02042 147 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 IGLV7-43P04211 117 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 SLC25A4P12235 298 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 NPPCP23582 126 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 S100A4P26447 101 aaKnown RBP2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 RPL27AP46776 148 aaKnown RBP2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 HIST1H4AP62805 103 aaKnown RBP2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 CCL20P78556 96 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 FUT5Q11128 374 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 TMEM155Q4W5P6 130 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 LINC01554Q52M75 96 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 SPATA45Q537H7 98 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 BVES-AS1Q5T3Y7 98 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 DPPA3Q6W0C5 159 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 C7orf65Q6ZTY9 151 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 RPRMLQ8N4K4 120 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 ST20-AS1Q8NBB2 130 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 OR10AG1Q8NH19 301 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 VSTM2AQ8TAG5 236 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 WFDC5Q8TCV5 224 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 YPEL2Q96QA6 119 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 IMMP2LQ96T52 175 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 PMCHL2Q9BQD1 86 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 SLC35B3Q9H1N7 401 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 NDUFB11Q9NX14 153 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 EPDR1Q9UM22 224 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 HHLA3Q9XRX5 114 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 LINC00588Q9Y4M8 146 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 PLXNA4Q9HCM2 1894 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 LAMB1P07942 1786 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 ITSN1Q15811 1721 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 ARHGEF28Q8N1W1 1705 aaKnown RBP2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 MYO3AQ8NEV4 1616 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 GLI2P10070 1586 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 DYSFO75923 2080 aa2.02□□□□□ -2.09
LSM1P1-201ENST00000438629 KDM3BQ7LBC6 1761 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 IGKV1-12A0A0C4DH73 117 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 A0A1W2PPM0 123 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 C7orf77A4D0Y5 90 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 GNGT2O14610 69 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 SLC25A20O43772 301 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 SSSCA1O60232 199 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 OR1I1O60431 355 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 SH2D1AO60880 128 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 TCL1BO95988 128 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 LHBP01229 141 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 IGKV1D-12P01611 117 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 CBLN1P23435 193 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 NFYAP23511 347 aaPredicted RBP2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 HLA-DMBP28068 263 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 RNASE4P34096 147 aaKnown RBP2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 CSN1S1P47710 185 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 MRPL51Q4U2R6 128 aaKnown RBP2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 Q6ZQT7 251 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 FP248Q71RG6 208 aaPredicted RBP2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 TMEM105Q8N8V8 129 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 SPANXA2-OT1Q8N9U9 137 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 C10orf105Q8TEF2 133 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 AMELYQ99218 206 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 PLA2G12AQ9BZM1 189 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 IL36BQ9NZH7 164 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 CACFD1Q9UGQ2 172 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 ICOSQ9Y6W8 199 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 BIVM-ERCC5R4GMW8 1640 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 ABCC1P33527 1531 aa2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 NKTRP30414 1462 aaKnown RBP2.01□□□□□ -2.09
LSM1P1-201ENST00000438629 OBSCNQ5VST9 7968 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 ANKRD50Q9ULJ7 1429 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 MAST2Q6P0Q8 1798 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 ARFGEF2Q9Y6D5 1785 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 RGPD1P0DJD0 1748 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 XRN1Q8IZH2 1706 aaKnown RBP2□□□□□ -2.09
LSM1P1-201ENST00000438629 IFT172Q9UG01 1749 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 SCN1AP35498 2009 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 MROH2AA6NES4 1674 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 A0A087WWC5 75 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 TRBV7-7A0A0K0K1E9 115 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 A6NED7 52 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 PROSCO94903 275 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 SOD1P00441 154 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 PRM2P04554 102 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 RNASE2P10153 161 aaKnown RBP2□□□□□ -2.09
LSM1P1-201ENST00000438629 COX6A1P12074 109 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 SLC25A16P16260 332 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 CDK5R1Q15078 307 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 MIC13Q5XKP0 118 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 ZNF660Q6AZW8 331 aaPredicted RBP2□□□□□ -2.09
LSM1P1-201ENST00000438629 SBSPONQ8IVN8 264 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 Q8N2B8 174 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms