RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 KHDC3LQ587J8 217 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 C2orf91Q6ZV80 131 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 POM121L12Q8N7R1 296 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 Q8NDZ9 215 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 ATP6V0E2Q8NHE4 81 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 AQP3Q92482 292 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 TNFRSF19Q9NS68 423 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 TAS2R4Q9NYW5 299 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 HHLA3Q9XRX5 114 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 ICOSQ9Y6W8 199 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 AHDC1Q5TGY3 1603 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 NKTRP30414 1462 aaKnown RBP2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 SIPA1L1O43166 1804 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 TUBGCP6Q96RT7 1819 aa2.38□□□□□ -2.03
HMGB1P12-201ENST00000438594 OBSL1O75147 1896 aa2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 PEAK1Q9H792 1746 aa2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 FMN2Q9NZ56 1722 aa2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 IGKV1OR2-108A0A075B7D4 117 aa2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 IGHV3-15A0A0B4J1V0 119 aa2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 IGHV3-73A0A0B4J1V6 119 aa2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 K7EM74 188 aa2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 SDCBPO00560 298 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 YPEL1O60688 119 aa2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 TIMM17BO60830 172 aa2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 MSMBP08118 114 aa2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 SAA1P0DJI8 122 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 COX7CP15954 63 aa2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 CIRBPQ14011 172 aaKnown RBP2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 FAM229BQ4G0N7 80 aa2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 ATP11AUNQ6ZP68 121 aa2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 LINC00299Q6ZSB3 139 aa2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 C1orf64Q8NEQ6 169 aa2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 CHCHD1Q96BP2 118 aaKnown RBP2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 S100A13Q99584 98 aa2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 DPH3P1Q9H4G8 78 aa2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 SMDT1Q9H4I9 107 aa2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 NUP98P52948 1817 aa2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 FAM208AQ9UK61 1670 aaKnown RBP2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 CCDC88AQ3V6T2 1871 aa2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P12-201ENST00000438594 CEP170BQ9Y4F5 1589 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 SVILO95425 2214 aa2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 IGKV1D-37A0A075B6S9 117 aa2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 TRAV1-1A0A0B4J248 108 aa2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 IGLC7A0M8Q6 106 aa2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 PDCD5O14737 125 aa2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 SNCGO76070 127 aa2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 LHBP01229 141 aa2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 ZNF705BP0CI00 300 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 COX6A1P12074 109 aa2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 SLC25A6P12236 298 aa2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 PEBP1P30086 187 aaKnown RBP2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 RPL28P46779 137 aaKnown RBP2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 XCL1P47992 114 aa2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 RPL26P61254 145 aaKnown RBP2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 SBSPONQ8IVN8 264 aa2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 Q8IYB0 196 aa2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 DYNAPQ8N1N2 210 aa2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 OR2T35Q8NGX2 323 aa2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 MUC7Q8TAX7 377 aa2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 HYLS1Q96M11 299 aa2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 RETNLBQ9BQ08 111 aa2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 ZNF355PQ9NSJ1 428 aa2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 TMEM14AQ9Y6G1 99 aa2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 PARP4Q9UKK3 1724 aaKnown RBP2.36□□□□□ -2.03
HMGB1P12-201ENST00000438594 ZNF646O15015 1829 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 TRPM3Q9HCF6 1732 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 IGLV3-12A0A075B6K2 115 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 A0A0B4J2C4 111 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 A0A1W2PQD3 144 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 C17orf98A8MV24 154 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 B4DSR2 109 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 E7EQL1 145 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 H7C423 109 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 UBL3O95164 117 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 IGLV1-51P01701 117 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 CKS2P33552 79 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 SNCAP37840 140 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 DEFA5Q01523 94 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 ASB16-AS1Q495Z4 193 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 Q8N8P6 123 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 SPANXA2-OT1Q8N9U9 137 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 RHOXF1Q8NHV9 184 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 TSLPQ969D9 159 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 LINC00479Q96M42 142 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 SMCO4Q9NRQ5 59 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 ASF1BQ9NVP2 202 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 TPRKBQ9Y3C4 175 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 TRAPPC1Q9Y5R8 145 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 CROCCQ5TZA2 2017 aa2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 CICQ96RK0 1608 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P12-201ENST00000438594 ARAP2Q8WZ64 1704 aa2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 PXDNLA1KZ92 1463 aa2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 NUP205Q92621 2012 aa2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 SIPA1L3O60292 1781 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 SLIT3O75094 1523 aa2.34□□□□□ -2.03
HMGB1P12-201ENST00000438594 NFAT5O94916 1531 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms